=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.buildinfo Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 rebuilderd-worker node: riscv64-34 +------------------------------------------------------------------------------+ | Downloading sources Mon, 24 Nov 2025 10:34:27 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.5 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [148 kB] Get:7 https://deb.debian.org/debian sid InRelease [176 kB] Get:8 https://deb.debian.org/debian experimental InRelease [82.8 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,548 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [93.1 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2,788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [35.8 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [1,052 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [96.4 kB] Get:17 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7,408 B] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [9,384 B] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [3,332 B] Get:22 https://deb.debian.org/debian experimental/main Sources [373 kB] Fetched 33.8 MB in 49s (684 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1-1.dsc' cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc 4050 SHA256:d467f81ab162c8003fc5252727e7b5fc1495ea9cee989a99cdfb78e137a5f348 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1.orig-dxtbx.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz 379044 SHA256:ef443acb8ab0fe7c90d8eaaf231e50a0771b2f54cc993570b20cefb7fd1d72ca 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1.orig.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 23958624 SHA256:fa3b4caaa27e77f2854dbcd64d410ee60c33eb575ff58871c3422034f1c4e07b 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1-1.debian.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz 423376 SHA256:68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 ef443acb8ab0fe7c90d8eaaf231e50a0771b2f54cc993570b20cefb7fd1d72ca cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz fa3b4caaa27e77f2854dbcd64d410ee60c33eb575ff58871c3422034f1c4e07b cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz d467f81ab162c8003fc5252727e7b5fc1495ea9cee989a99cdfb78e137a5f348 cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 24 Nov 2025 10:35:23 +0000 | +------------------------------------------------------------------------------+ Rebuilding cctbx=2025.2+ds2+~3.23.0+ds1-1 in /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderd9G8i4q/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [176 kB] Get:2 http://snapshot.debian.org/archive/debian/20251022T143047Z sid InRelease [207 kB] Get:3 http://snapshot.debian.org/archive/debian/20251028T025150Z sid InRelease [207 kB] Get:4 http://deb.debian.org/debian unstable/main riscv64 Packages [9831 kB] Get:5 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 Packages [9833 kB] Get:6 http://snapshot.debian.org/archive/debian/20251028T025150Z sid/main riscv64 Packages [9830 kB] Fetched 30.1 MB in 11s (2810 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251022T143047Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20251028T025150Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main riscv64 libunistring5 riscv64 1.3-2 [474 kB] Fetched 474 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp9339hpf/libunistring5_1.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblkid1 riscv64 2.41.2-4 [193 kB] Fetched 193 kB in 0s (8036 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptjrvg64s/libblkid1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 comerr-dev riscv64 2.1-1.47.2-3+b3 [60.1 kB] Fetched 60.1 kB in 0s (1100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpai8u9a77/comerr-dev_2.1-1.47.2-3+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (1697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukdovh_i/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-brotli riscv64 1.1.0-2+b7 [362 kB] Fetched 362 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy7emnrfj/python3-brotli_1.1.0-2+b7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxi6 riscv64 2:1.8.2-1 [80.2 kB] Fetched 80.2 kB in 0s (3677 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmadcfwp8/libxi6_1.8.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcups2t64 riscv64 2.4.14-1 [251 kB] Fetched 251 kB in 0s (9841 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdzsttl6j/libcups2t64_2.4.14-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libevent-core-2.1-7t64 riscv64 2.1.12-stable-10+b1 [132 kB] Fetched 132 kB in 0s (2371 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpij0rfo1s/libevent-core-2.1-7t64_2.1.12-stable-10+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjansson4 riscv64 2.14-2+b3 [40.7 kB] Fetched 40.7 kB in 0s (1979 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1q451qgi/libjansson4_2.14-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (228 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdbyk890y/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (620 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7makj4r2/python3-decorator_5.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 systemd-sysv riscv64 258.1-1 [63.4 kB] Fetched 63.4 kB in 0s (1179 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpck23xwhh/systemd-sysv_258.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost1.83-dev riscv64 1.83.0-5 [10.6 MB] Fetched 10.6 MB in 1s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuldco95j/libboost1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libedit2 riscv64 3.1-20250104-1 [92.5 kB] Fetched 92.5 kB in 0s (4170 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0z5tqklk/libedit2_3.1-20250104-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xinput0 riscv64 1.17.0-2+b1 [130 kB] Fetched 130 kB in 0s (2342 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwga5n5f/libxcb-xinput0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7lwsj5ci/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libibumad3 riscv64 56.1-1+b1 [29.9 kB] Fetched 29.9 kB in 0s (562 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppxfao5o3/libibumad3_56.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-h5py all 3.14.0-3 [18.3 kB] Fetched 18.3 kB in 0s (348 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7iny6har/python3-h5py_3.14.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libdav1d7 riscv64 1.5.1-1 [258 kB] Fetched 258 kB in 0s (4441 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaj8ml7sp/libdav1d7_1.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcloudproviders0 riscv64 0.3.6-3 [28.0 kB] Fetched 28.0 kB in 0s (1342 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplk_89hlk/libcloudproviders0_0.3.6-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tar riscv64 1.35+dfsg-3.1 [822 kB] Fetched 822 kB in 0s (21.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpowqdxcwx/tar_1.35+dfsg-3.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-minimal riscv64 3.13.9-1 [861 kB] Fetched 861 kB in 0s (21.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmzd35zmj/libpython3.13-minimal_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadline8t64 riscv64 8.3-3 [181 kB] Fetched 181 kB in 0s (7637 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfr_0kl22/libreadline8t64_8.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpay5exkwr/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (2672 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphambsn9w/python3-packaging_25.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfontenc1 riscv64 1:1.1.8-1+b2 [22.8 kB] Fetched 22.8 kB in 0s (431 kB/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmp99gg4d13/libfontenc1_1.1.8-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus-system-bus-common all 1.16.2-2 [53.5 kB] Fetched 53.5 kB in 0s (2539 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp56dva1zh/dbus-system-bus-common_1.16.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 m4 riscv64 1.4.20-2 [323 kB] Fetched 323 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2j0hn1n/m4_1.4.20-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libantlr3c-dev riscv64 3.4+dfsg-4+b2 [200 kB] Fetched 200 kB in 1s (155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm2ogonlh/libantlr3c-dev_3.4+dfsg-4+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 diffutils riscv64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (14.2 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpc6x0iyn3/diffutils_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-ordered-set all 4.1.0-1 [9628 B] Fetched 9628 B in 1s (17.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyt4uak_l/python3-ordered-set_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all-dev riscv64 3.13.7-1 [1068 B] Fetched 1068 B in 1s (1088 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzzo6krgl/python3-all-dev_3.13.7-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libpam-systemd riscv64 258.1-1 [312 kB] Fetched 312 kB in 0s (1241 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp920q4yrh/libpam-systemd_258.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-legacy-cgi all 2.6.3-1 [16.5 kB] Fetched 16.5 kB in 0s (311 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwuh_pruq/python3-legacy-cgi_2.6.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-atomic1.83-dev riscv64 1.83.0-5 [243 kB] Fetched 243 kB in 0s (4173 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzeba66w1/libboost-atomic1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-310 riscv64 1.14.5+repack-4 [71.6 kB] Fetched 71.6 kB in 0s (1321 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuz13yvn9/libhdf5-hl-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-numpy-dev riscv64 1.83.0.2+b2 [3632 B] Fetched 3632 B in 0s (69.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp34kjc4fl/libboost-numpy-dev_1.83.0.2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-10 [20.2 kB] Fetched 20.2 kB in 0s (989 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprxevsbnm/libsasl2-modules-db_2.1.28+dfsg1-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 nettle-dev riscv64 3.10.2-1 [1557 kB] Fetched 1557 kB in 0s (16.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhl2csnq/nettle-dev_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxtst6 riscv64 2:1.2.5-1 [26.4 kB] Fetched 26.4 kB in 0s (1298 kB/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp3xw20i3m/libxtst6_1.2.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxxhash-dev riscv64 0.8.3-2 [175 kB] Fetched 175 kB in 0s (3092 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw7dagfws/libxxhash-dev_0.8.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnghttp3-dev riscv64 1.12.0-1 [203 kB] Fetched 203 kB in 0s (3536 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprco5cj6d/libnghttp3-dev_1.12.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-sympy all 1.14.0-2 [4228 kB] Fetched 4228 kB in 0s (28.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxwqzt_1p/python3-sympy_1.14.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dpkg riscv64 1.22.21 [1542 kB] Fetched 1542 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiph5lcij/dpkg_1.22.21_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgudev-1.0-0 riscv64 238-7 [14.2 kB] Fetched 14.2 kB in 0s (705 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx57tytxg/libgudev-1.0-0_238-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules riscv64 1.7.0-5 [177 kB] Fetched 177 kB in 0s (7506 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp88ysritv/libpam-modules_1.7.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnghttp2-14 riscv64 1.64.0-1.1+b1 [78.1 kB] Fetched 78.1 kB in 0s (3607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp69mtow6d/libnghttp2-14_1.64.0-1.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libccp4f0t64 riscv64 8.0.0-5 [211 kB] Fetched 211 kB in 1s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wcs9nfj/libccp4f0t64_8.0.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (4662 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxogyntz/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-numpy riscv64 1:2.3.3+ds-3 [3629 kB] Fetched 3629 kB in 0s (27.4 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.3+ds-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpnj1dvlub/python3-numpy_2.3.3+ds-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxxhash0 riscv64 0.8.3-2 [40.1 kB] Fetched 40.1 kB in 0s (1896 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hjoukhi/libxxhash0_0.8.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-render-util0 riscv64 0.3.10-1 [18.4 kB] Fetched 18.4 kB in 0s (349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm370sqhl/libxcb-render-util0_0.3.10-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsvtav1enc2 riscv64 2.3.0+dfsg-1 [1119 kB] Fetched 1119 kB in 0s (14.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp23ls1wcg/libsvtav1enc2_2.3.0+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libthai-data all 0.1.29-2 [168 kB] Fetched 168 kB in 0s (7178 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpanjnk0w6/libthai-data_0.1.29-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsharpyuv-dev riscv64 1.5.0-0.1 [129 kB] Fetched 129 kB in 0s (5710 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp5g3_6jd/libsharpyuv-dev_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB] Fetched 40.3 kB in 0s (1965 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq7ejqfgy/libbz2-1.0_1.0.8-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcurl4-openssl-dev riscv64 8.17.0~rc2-1 [1313 kB] Fetched 1313 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5g3rmfv7/libcurl4-openssl-dev_8.17.0~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b1 [37.6 kB] Fetched 37.6 kB in 0s (1830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpipq6rc/libmd0_1.1.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpopt0 riscv64 1.19+dfsg-2 [44.6 kB] Fetched 44.6 kB in 0s (831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsjbubnog/libpopt0_1.19+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Fetched 85.7 kB in 0s (3925 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpqem2flb1/zlib1g_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libdebconfclient0 riscv64 0.280 [10.5 kB] Fetched 10.5 kB in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu523fyz/libdebconfclient0_0.280_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-requests all 2.32.5+dfsg-1 [72.4 kB] Fetched 72.4 kB in 0s (1332 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbg_ne6ww/python3-requests_2.32.5+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libk5crypto3 riscv64 1.21.3-5 [100 kB] Fetched 100 kB in 0s (1822 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps80cg2oy/libk5crypto3_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libpipeline1 riscv64 1.5.8-1 [40.3 kB] Fetched 40.3 kB in 0s (740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpafjzaw3a/libpipeline1_1.5.8-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pkgconf riscv64 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (1286 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwh3qu7zo/pkgconf_1.8.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnm8xurwt/tzdata_2025b-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (23.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpom4y4r42/debhelper_13.28_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libbinutils riscv64 2.45-7 [521 kB] Fetched 521 kB in 0s (8146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvrz0dm0d/libbinutils_2.45-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn59dphz8/autopoint_0.23.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libegl1 riscv64 1.7.0-1+b2 [35.9 kB] Fetched 35.9 kB in 0s (1719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwjgfsf34/libegl1_1.7.0-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libxml2-16 riscv64 2.14.6+dfsg-0.1 [650 kB] Fetched 650 kB in 0s (9491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo5o6eq2e/libxml2-16_2.14.6+dfsg-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglx0 riscv64 1.7.0-1+b2 [30.8 kB] Fetched 30.8 kB in 0s (1504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp06nktqng/libglx0_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg62-turbo-dev riscv64 1:2.1.5-4 [420 kB] Fetched 420 kB in 0s (14.5 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmptvtrqawj/libjpeg62-turbo-dev_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libldap2 riscv64 2.6.10+dfsg-1 [197 kB] Fetched 197 kB in 0s (8175 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphovtymlt/libldap2_2.6.10+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmunge2 riscv64 0.5.16-1 [19.9 kB] Fetched 19.9 kB in 0s (370 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo8ulcl0q/libmunge2_0.5.16-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (9831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4dn5tlf_/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (592 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7z34o7xj/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (5367 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ropwau_/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libccp4c0t64 riscv64 8.0.0-5 [91.1 kB] Fetched 91.1 kB in 1s (107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9g6lf7br/libccp4c0t64_8.0.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-16-0 riscv64 10.46-1 [277 kB] Fetched 277 kB in 0s (4700 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9avz7rz7/libpcre2-16-0_10.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-present0 riscv64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (4745 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7cbx33ic/libxcb-present0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus riscv64 1.16.2-2 [71.5 kB] Fetched 71.5 kB in 0s (3350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx52yc1qr/dbus_1.16.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-atomic1.83.0 riscv64 1.83.0-5 [234 kB] Fetched 234 kB in 0s (4057 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq5ebkj3r/libboost-atomic1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pluggy all 1.6.0-1 [27.1 kB] Fetched 27.1 kB in 0s (510 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbjca8puv/python3-pluggy_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-python1.83-dev riscv64 1.83.0-5 [754 kB] Fetched 754 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr94mh9eo/libboost-python1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclipper-dev riscv64 2.1.20201109-2+b3 [82.4 kB] Fetched 82.4 kB in 0s (1509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptls9572j/libclipper-dev_2.1.20201109-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmpxx4ldbl riscv64 2:6.3.0+dfsg-5 [329 kB] Fetched 329 kB in 0s (5455 kB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpr3w76f8z/libgmpxx4ldbl_6.3.0+dfsg-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-310 riscv64 1.14.5+repack-4 [1393 kB] Fetched 1393 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6q1ore95/libhdf5-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-urw-base35 all 20200910-8 [10.8 MB] Fetched 10.8 MB in 1s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1pw4uf7h/fonts-urw-base35_20200910-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebpmux3 riscv64 1.5.0-0.1 [126 kB] Fetched 126 kB in 0s (5623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn397ciky/libwebpmux3_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 unicode-data all 16.0.0-1 [9197 kB] Fetched 9197 kB in 1s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkrt21pp9/unicode-data_16.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sfftw-dev riscv64 2.1.5-7+b1 [298 kB] Fetched 298 kB in 0s (5032 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynaqe1eg/sfftw-dev_2.1.5-7+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libasan8 riscv64 15.2.0-4 [2938 kB] Fetched 2938 kB in 0s (23.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr44osqjt/libasan8_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libqt5help5 riscv64 5.15.17-3 [155 kB] Fetched 155 kB in 0s (2740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfwvzhq7k/libqt5help5_5.15.17-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-randr0 riscv64 1.17.0-2+b1 [117 kB] Fetched 117 kB in 0s (5031 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2pixyyze/libxcb-randr0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwayland-cursor0 riscv64 1.24.0-2+b1 [12.0 kB] Fetched 12.0 kB in 0s (224 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp32ulu30p/libwayland-cursor0_1.24.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-numpy1.83-dev riscv64 1.83.0-5 [309 kB] Fetched 309 kB in 0s (4487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunupleic/libboost-numpy1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libabsl20240722 riscv64 20240722.0-4 [494 kB] Fetched 494 kB in 0s (7810 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz857x3ta/libabsl20240722_20240722.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 linux-libc-dev all 6.16.12-2 [2547 kB] Fetched 2547 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1lc4xh2l/linux-libc-dev_6.16.12-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libxkbcommon-x11-0 riscv64 1.7.0-2.1 [15.4 kB] Fetched 15.4 kB in 0s (290 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7qf76u94/libxkbcommon-x11-0_1.7.0-2.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-procrunner all 2.3.3-2 [13.9 kB] Fetched 13.9 kB in 1s (23.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpjj91l6/python3-procrunner_2.3.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_njvwytm/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3n9ljg5/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-msgpack riscv64 1.0.3-3+b5 [86.3 kB] Fetched 86.3 kB in 0s (1574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf5iriq8n/python3-msgpack_1.0.3-3+b5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5opengl5t64 riscv64 5.15.17+dfsg-4 [153 kB] Fetched 153 kB in 0s (2714 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3r10ed_o/libqt5opengl5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5widgets5t64 riscv64 5.15.17+dfsg-4 [2516 kB] Fetched 2516 kB in 0s (22.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7nxjqx3b/libqt5widgets5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl-provider-legacy riscv64 3.5.4-1 [310 kB] Fetched 310 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5iqyvrfb/openssl-provider-legacy_3.5.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pytest all 8.4.2-1 [266 kB] Fetched 266 kB in 0s (4559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunaden9m/python3-pytest_8.4.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libopenjp2-7 riscv64 2.5.3-2.1 [216 kB] Fetched 216 kB in 0s (8821 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppskrtvrc/libopenjp2-7_2.5.3-2.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libaom3 riscv64 3.13.1-1 [1313 kB] Fetched 1313 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwmsl4_g8/libaom3_3.13.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm-common all 2.4.127-1 [9060 B] Fetched 9060 B in 0s (453 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps4aj0gzc/libdrm-common_2.4.127-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 dconf-service riscv64 0.49.0-1 [33.2 kB] Fetched 33.2 kB in 0s (622 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpja1rnx8r/dconf-service_0.49.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb1 riscv64 1.17.0-2+b1 [145 kB] Fetched 145 kB in 0s (6335 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfl0vhphp/libxcb1_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libctf-nobfd0 riscv64 2.45-7 [163 kB] Fetched 163 kB in 0s (2879 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc76ey9_b/libctf-nobfd0_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13 riscv64 3.13.9-1 [2171 kB] Fetched 2171 kB in 0s (20.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3j92pbf5/libpython3.13_3.13.9-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libpmix2t64 riscv64 6.0.0+really5.0.8-1 [655 kB] Fetched 655 kB in 0s (9684 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiv2qph4c/libpmix2t64_6.0.0+really5.0.8-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pymol riscv64 3.1.0+dfsg-1+b1 [3768 kB] Fetched 3768 kB in 5s (799 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcvm0hodr/python3-pymol_3.1.0+dfsg-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-natsort all 8.4.0-1 [38.9 kB] Fetched 38.9 kB in 0s (726 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpupfpfv90/python3-natsort_8.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 grep riscv64 3.12-1 [442 kB] Fetched 442 kB in 0s (7072 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp26hmrzmk/grep_3.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 binutils-riscv64-linux-gnu riscv64 2.45-7 [891 kB] Fetched 891 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpavglg5m4/binutils-riscv64-linux-gnu_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-common-data riscv64 0.8-17 [113 kB] Fetched 113 kB in 0s (5106 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzdm95b83/libavahi-common-data_0.8-17_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libudev1 riscv64 258.1-1 [158 kB] Fetched 158 kB in 0s (2786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps1siob7e/libudev1_258.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkrb5-3 riscv64 1.21.3-5 [334 kB] Fetched 334 kB in 0s (5568 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98z0m4n3/libkrb5-3_1.21.3-5_riscv64.deb' Downloading dependency 1 of 631: libunistring5:riscv64=1.3-2 Downloading dependency 2 of 631: libblkid1:riscv64=2.41.2-4 Downloading dependency 3 of 631: comerr-dev:riscv64=2.1-1.47.2-3+b3 Downloading dependency 4 of 631: python3-typing-extensions:riscv64=4.15.0-1 Downloading dependency 5 of 631: python3-brotli:riscv64=1.1.0-2+b7 Downloading dependency 6 of 631: libxi6:riscv64=2:1.8.2-1 Downloading dependency 7 of 631: libcups2t64:riscv64=2.4.14-1 Downloading dependency 8 of 631: libevent-core-2.1-7t64:riscv64=2.1.12-stable-10+b1 Downloading dependency 9 of 631: libjansson4:riscv64=2.14-2+b3 Downloading dependency 10 of 631: python3-jaraco.functools:riscv64=4.1.0-1 Downloading dependency 11 of 631: python3-decorator:riscv64=5.2.1-2 Downloading dependency 12 of 631: systemd-sysv:riscv64=258.1-1 Downloading dependency 13 of 631: libboost1.83-dev:riscv64=1.83.0-5 Downloading dependency 14 of 631: libedit2:riscv64=3.1-20250104-1 Downloading dependency 15 of 631: libxcb-xinput0:riscv64=1.17.0-2+b1 Downloading dependency 16 of 631: netbase:riscv64=6.5 Downloading dependency 17 of 631: libibumad3:riscv64=56.1-1+b1 Downloading dependency 18 of 631: python3-h5py:riscv64=3.14.0-3 Downloading dependency 19 of 631: libdav1d7:riscv64=1.5.1-1 Downloading dependency 20 of 631: libcloudproviders0:riscv64=0.3.6-3 Downloading dependency 21 of 631: tar:riscv64=1.35+dfsg-3.1 Downloading dependency 22 of 631: libpython3.13-minimal:riscv64=3.13.9-1 Downloading dependency 23 of 631: libreadline8t64:riscv64=8.3-3 Downloading dependency 24 of 631: python3-setuptools:riscv64=78.1.1-0.1 Downloading dependency 25 of 631: python3-packaging:riscv64=25.0-1 Downloading dependency 26 of 631: libfontenc1:riscv64=1:1.1.8-1+b2 Downloading dependency 27 of 631: dbus-system-bus-common:riscv64=1.16.2-2 Downloading dependency 28 of 631: m4:riscv64=1.4.20-2 Downloading dependency 29 of 631: libantlr3c-dev:riscv64=3.4+dfsg-4+b2 Downloading dependency 30 of 631: diffutils:riscv64=1:3.12-1 Downloading dependency 31 of 631: python3-ordered-set:riscv64=4.1.0-1 Downloading dependency 32 of 631: python3-all-dev:riscv64=3.13.7-1 Downloading dependency 33 of 631: libpam-systemd:riscv64=258.1-1 Downloading dependency 34 of 631: python3-legacy-cgi:riscv64=2.6.3-1 Downloading dependency 35 of 631: libboost-atomic1.83-dev:riscv64=1.83.0-5 Downloading dependency 36 of 631: libhdf5-hl-310:riscv64=1.14.5+repack-4 Downloading dependency 37 of 631: libboost-numpy-dev:riscv64=1.83.0.2+b2 Downloading dependency 38 of 631: libsasl2-modules-db:riscv64=2.1.28+dfsg1-10 Downloading dependency 39 of 631: nettle-dev:riscv64=3.10.2-1 Downloading dependency 40 of 631: libxtst6:riscv64=2:1.2.5-1 Downloading dependency 41 of 631: libxxhash-dev:riscv64=0.8.3-2 Downloading dependency 42 of 631: libnghttp3-dev:riscv64=1.12.0-1 Downloading dependency 43 of 631: python3-sympy:riscv64=1.14.0-2 Downloading dependency 44 of 631: dpkg:riscv64=1.22.21 Downloading dependency 45 of 631: libgudev-1.0-0:riscv64=238-7 Downloading dependency 46 of 631: libpam-modules:riscv64=1.7.0-5 Downloading dependency 47 of 631: libnghttp2-14:riscv64=1.64.0-1.1+b1 Downloading dependency 48 of 631: libccp4f0t64:riscv64=8.0.0-5 Downloading dependency 49 of 631: ncurses-base:riscv64=6.5+20250216-2 Downloading dependency 50 of 631: python3-numpy:riscv64=1:2.3.3+ds-3 Downloading dependency 51 of 631: libxxhash0:riscv64=0.8.3-2 Downloading dependency 52 of 631: libxcb-render-util0:riscv64=0.3.10-1 Downloading dependency 53 of 631: libsvtav1enc2:riscv64=2.3.0+dfsg-1 Downloading dependency 54 of 631: libthai-data:riscv64=0.1.29-2 Downloading dependency 55 of 631: libsharpyuv-dev:riscv64=1.5.0-0.1 Downloading dependency 56 of 631: libbz2-1.0:riscv64=1.0.8-6 Downloading dependency 57 of 631: libcurl4-openssl-dev:riscv64=8.17.0~rc2-1 Downloading dependency 58 of 631: libmd0:riscv64=1.1.0-2+b1 Downloading dependency 59 of 631: libpopt0:riscv64=1.19+dfsg-2 Downloading dependency 60 of 631: 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Downloading dependency 76 of 631: po-debconf:riscv64=1.0.21+nmu1 Downloading dependency 77 of 631: hicolor-icon-theme:riscv64=0.18-2 Downloading dependency 78 of 631: debconf:riscv64=1.5.91 Downloading dependency 79 of 631: libccp4c0t64:riscv64=8.0.0-5 Downloading dependency 80 of 631: libpcre2-16-0:riscv64=10.46-1 Downloading dependency 81 of 631: libxcb-present0:riscv64=1.17.0-2+b1 Downloading dependency 82 of 631: dbus:riscv64=1.16.2-2 Downloading dependency 83 of 631: libboost-atomic1.83.0:riscv64=1.83.0-5 Downloading dependency 84 of 631: python3-pluggy:riscv64=1.6.0-1 Downloading dependency 85 of 631: libboost-python1.83-dev:riscv64=1.83.0-5 Downloading dependency 86 of 631: libclipper-dev:riscv64=2.1.20201109-2+b3 Downloading dependency 87 of 631: libgmpxx4ldbl:riscv64=2:6.3.0+dfsg-5 Downloading dependency 88 of 631: libhdf5-310:riscv64=1.14.5+repack-4 Downloading dependency 89 of 631: fonts-urw-base35:riscv64=20200910-8 Downloading dependency 90 of 631: libwebpmux3:riscv64=1.5.0-0.1 Downloading dependency 91 of 631: unicode-data:riscv64=16.0.0-1 Downloading dependency 92 of 631: sfftw-dev:riscv64=2.1.5-7+b1 Downloading dependency 93 of 631: libasan8:riscv64=15.2.0-4 Downloading dependency 94 of 631: libqt5help5:riscv64=5.15.17-3 Downloading dependency 95 of 631: libxcb-randr0:riscv64=1.17.0-2+b1 Downloading dependency 96 of 631: libwayland-cursor0:riscv64=1.24.0-2+b1 Downloading dependency 97 of 631: libboost-numpy1.83-dev:riscv64=1.83.0-5 Downloading dependency 98 of 631: libabsl20240722:riscv64=20240722.0-4 Downloading dependency 99 of 631: linux-libc-dev:riscv64=6.16.12-2 Downloading dependency 100 of 631: libxkbcommon-x11-0:riscv64=1.7.0-2.1 Downloading dependency 101 of 631: python3-procrunner:riscv64=2.3.3-2 Downloading dependency 102 of 631: fonts-dejavu-mono:riscv64=2.37-8 Downloading dependency 103 of 631: python3-inflect:riscv64=7.5.0-1 Downloading dependency 104 of 631: python3-msgpack:riscv64=1.0.3-3+b5 Downloading dependency 105 of 631: libqt5opengl5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 106 of 631: libqt5widgets5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 107 of 631: openssl-provider-legacy:riscv64=3.5.4-1 Downloading dependency 108 of 631: python3-pytest:riscv64=8.4.2-1 Downloading dependency 109 of 631: libopenjp2-7:riscv64=2.5.3-2.1 Downloading dependency 110 of 631: libaom3:riscv64=3.13.1-1 Downloading dependency 111 of 631: libdrm-common:riscv64=2.4.127-1 Downloading dependency 112 of 631: dconf-service:riscv64=0.49.0-1 Downloading dependency 113 of 631: libxcb1:riscv64=1.17.0-2+b1 Downloading dependency 114 of 631: libctf-nobfd0:riscv64=2.45-7 Downloading dependency 115 of 631: libpython3.13:riscv64=3.13.9-1 Downloading dependency 116 of 631: libpmix2t64:riscv64=6.0.0+really5.0.8-1 Downloading dependency 117 of 631: python3-pymol:riscv64=3.1.0+dfsg-1+b1 Downloading dependency 118 of 631: python3-natsort:riscv64=8.4.0-1 Downloading dependency 119 of 631: grep:riscv64=3.12-1 Downloading dependency 120 of 631: binutils-riscv64-linux-gnu:riscv64=2.45-7 Downloading dependency 121 of 631: libavahi-common-data:riscv64=0.8-17 Downloading dependency 122 of 631: libudev1:riscv64=258.1-1 Downloading dependency 123 of 631: libkrb5-3:riscv64=1.21.3-5 Downloading dependency 124 of 631: python3-kiwisolver:riscv64=1.4.10~rc0-1Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-kiwisolver riscv64 1.4.10~rc0-1 [64.8 kB] Fetched 64.8 kB in 0s (1203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8zqq53c2/python3-kiwisolver_1.4.10~rc0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xml-core all 0.19 [20.1 kB] Fetched 20.1 kB in 0s (1003 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5j59iu1/xml-core_0.19_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyqt5.sip riscv64 12.17.1-1 [60.5 kB] Fetched 60.5 kB in 0s (1649 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1s5vzd2b/python3-pyqt5.sip_12.17.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-lyx all 2.4.4-2 [190 kB] Fetched 190 kB in 0s (3325 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvez7tw1g/fonts-lyx_2.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libapparmor1 riscv64 4.1.0-1 [44.6 kB] Fetched 44.6 kB in 0s (2179 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjqye38gh/libapparmor1_4.1.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzma-dev riscv64 5.8.1-2 [504 kB] Fetched 504 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpff890t_h/liblzma-dev_5.8.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 groff-base riscv64 1.23.0-9 [1163 kB] Fetched 1163 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn0itu2od/groff-base_1.23.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-stdlib riscv64 3.13.9-1 [1928 kB] Fetched 1928 kB in 0s (31.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpypguub2z/libpython3.13-stdlib_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-dev riscv64 3.3.10-2+b1 [1492 kB] Fetched 1492 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxifjgpru/libfftw3-dev_3.3.10-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (22.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8sjv3g7/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libseccomp2 riscv64 2.6.0-2 [53.1 kB] Fetched 53.1 kB in 0s (991 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxhftiw2/libseccomp2_2.6.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (713 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp8271bbf_/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all riscv64 3.13.7-1 [1048 B] Fetched 1048 B in 0s (20.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoz58we1h/python3-all_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5sql5t64 riscv64 5.15.17+dfsg-4 [129 kB] Fetched 129 kB in 0s (2317 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0tqjza06/libqt5sql5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjbig-dev riscv64 2.1-6.1+b2 [51.4 kB] Fetched 51.4 kB in 0s (2468 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprwwpu_4_/libjbig-dev_2.1-6.1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libicu76 riscv64 76.1-4 [9694 kB] Fetched 9694 kB in 0s (36.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2o7q5lof/libicu76_76.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwacom-common all 2.16.1-1 [112 kB] Fetched 112 kB in 0s (2030 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpio05qm16/libwacom-common_2.16.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgpg-error0 riscv64 1.56-2 [89.9 kB] Fetched 89.9 kB in 0s (1641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprs3ch2pn/libgpg-error0_1.56-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-serialization1.83-dev riscv64 1.83.0-5 [935 kB] Fetched 935 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3mu8t2h/libboost-serialization1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg-dev riscv64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (3375 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmhvkayxi/libjpeg-dev_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (3525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpww7zgxo3/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglew2.2 riscv64 2.2.0-4+b2 [169 kB] Fetched 169 kB in 0s (2989 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7s2xlfub/libglew2.2_2.2.0-4+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgcc-s1 riscv64 15.2.0-4 [61.5 kB] Fetched 61.5 kB in 0s (1141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7w_8xzkr/libgcc-s1_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libstdc++-15-dev riscv64 15.2.0-4 [6140 kB] Fetched 6140 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppkhzkvod/libstdc++-15-dev_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyparsing all 3.1.3-1 [148 kB] Fetched 148 kB in 1s (195 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1qe_lc40/python3-pyparsing_3.1.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libldap-dev riscv64 2.6.10+dfsg-1 [584 kB] Fetched 584 kB in 0s (8988 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpph94xhjs/libldap-dev_2.6.10+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB] Fetched 221 kB in 0s (3855 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp3a4wp1z5/libcrypt-dev_4.4.38-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libtsan2 riscv64 15.2.0-4 [2652 kB] Fetched 2652 kB in 0s (23.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqixwmrxp/libtsan2_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (1512 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeuq_08pd/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-opengl all 3.1.10+dfsg-1 [624 kB] Fetched 624 kB in 0s (9476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1w2pyq5o/python3-opengl_3.1.10+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcurl3t64-gnutls riscv64 8.17.0~rc2-1 [405 kB] Fetched 405 kB in 0s (6593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpas56p7f1/libcurl3t64-gnutls_8.17.0~rc2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkdb5-10t64 riscv64 1.21.3-5 [43.4 kB] Fetched 43.4 kB in 0s (811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4jaw84r/libkdb5-10t64_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (12.6 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpm8h2acz4/libx11-data_1.8.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-urllib3 all 2.5.0-1 [116 kB] Fetched 116 kB in 0s (2104 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5dwem8l8/python3-urllib3_2.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tk8.6-blt2.5 riscv64 2.5.3+dfsg-8 [585 kB] Fetched 585 kB in 0s (9016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz7allubk/tk8.6-blt2.5_2.5.3+dfsg-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Fetched 836 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnhrqull8/python3-pygments_2.18.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (4259 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzm_hdnjc/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsmartcols1 riscv64 2.41.2-4 [155 kB] Fetched 155 kB in 0s (6677 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp12k99kj7/libsmartcols1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xz-utils riscv64 5.8.1-2 [659 kB] Fetched 659 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1_mh9si/xz-utils_5.8.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 binutils-common riscv64 2.45-7 [2558 kB] Fetched 2558 kB in 0s (21.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpojx969_l/binutils-common_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (442 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgc1na4of/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-chrono1.83-dev riscv64 1.83.0-5 [307 kB] Fetched 307 kB in 0s (5180 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpok8_w8js/libboost-chrono1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 jq riscv64 1.8.1-4 [84.9 kB] Fetched 84.9 kB in 0s (1565 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplrkjajqs/jq_1.8.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglu1-mesa-dev riscv64 9.0.2-1.1+b3 [546 kB] Fetched 546 kB in 0s (8524 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpndw09nax/libglu1-mesa-dev_9.0.2-1.1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 perl riscv64 5.40.1-6 [267 kB] Fetched 267 kB in 0s (4586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmportdonbd/perl_5.40.1-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm6t64 riscv64 1.26-1 [79.0 kB] Fetched 79.0 kB in 0s (3688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuuhv42d8/libgdbm6t64_1.26-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libdconf1 riscv64 0.49.0-1 [42.8 kB] Fetched 42.8 kB in 0s (802 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4c3kad26/libdconf1_0.49.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 adduser all 3.153 [191 kB] Fetched 191 kB in 0s (3372 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dknwvfs/adduser_3.153_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-date-time1.83.0 riscv64 1.83.0-5 [230 kB] Fetched 230 kB in 0s (4015 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkjeqkcn9/libboost-date-time1.83.0_1.83.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 liblz4-dev riscv64 1.10.0-4 [308 kB] Fetched 308 kB in 0s (5220 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgaiyxz6k/liblz4-dev_1.10.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libx11-6 riscv64 2:1.8.12-1 [817 kB] Fetched 817 kB in 0s (21.8 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpfau3na_3/libx11-6_1.8.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libucx0 riscv64 1.19.0+ds-1 [1190 kB] Fetched 1190 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcexb9kai/libucx0_1.19.0+ds-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpango-1.0-0 riscv64 1.56.3-2 [225 kB] Fetched 225 kB in 0s (9137 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiyyi1zao/libpango-1.0-0_1.56.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 librav1e0.8 riscv64 0.8.1-5 [653 kB] Fetched 653 kB in 0s (9854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpouol9y_4/librav1e0.8_0.8.1-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxnvctrl0 riscv64 535.171.04-1+b2 [14.5 kB] Fetched 14.5 kB in 0s (276 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppysc9t_7/libxnvctrl0_535.171.04-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 ncurses-bin riscv64 6.5+20250216-2 [436 kB] Fetched 436 kB in 0s (6810 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_j5omhwc/ncurses-bin_6.5+20250216-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-hdf5plugin all 5.1.0-1 [27.1 kB] Fetched 27.1 kB in 0s (62.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjep6u1lr/python3-hdf5plugin_5.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xkb-data all 2.42-1 [790 kB] Fetched 790 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxx1_cet/xkb-data_2.42-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-mrcfile all 1.5.4-2 [118 kB] Fetched 118 kB in 0s (2140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7gecvm6a/python3-mrcfile_1.5.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (1327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1mw2dy0b/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b1 [182 kB] Fetched 182 kB in 0s (7504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqceyjl8/libevent-2.1-7t64_2.1.12-stable-10+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 findutils riscv64 4.10.0-3 [706 kB] Fetched 706 kB in 0s (20.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu8tge6ex/findutils_4.10.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglx-dev riscv64 1.7.0-1+b2 [15.8 kB] Fetched 15.8 kB in 0s (783 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpifnaj8ev/libglx-dev_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaec-dev riscv64 1.1.4-2 [42.0 kB] Fetched 42.0 kB in 0s (788 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy4xndo4y/libaec-dev_1.1.4-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgav1-1 riscv64 0.19.0-3+b1 [349 kB] Fetched 349 kB in 0s (5653 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpus5kozxw/libgav1-1_0.19.0-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1-dev riscv64 2.7.3-1 [334 kB] Fetched 334 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnm8nedm7/libexpat1-dev_2.7.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 procps riscv64 2:4.0.4-9 [880 kB] Fetched 880 kB in 0s (22.7 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_riscv64.deb' to '/srv/rebuilderd/tmp/tmpc8fq8q1_/procps_4.0.4-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rpcsvc-proto riscv64 1.4.3-1+b2 [62.3 kB] Fetched 62.3 kB in 0s (2950 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkckahw0z/rpcsvc-proto_1.4.3-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebpdemux2 riscv64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (5094 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9u95brb6/libwebpdemux2_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjbig0 riscv64 2.1-6.1+b2 [33.0 kB] Fetched 33.0 kB in 0s (1608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7llm0bym/libjbig0_2.1-6.1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libopengl-dev riscv64 1.7.0-1+b2 [5372 B] Fetched 5372 B in 0s (271 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpreqtilfy/libopengl-dev_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtk8.6 riscv64 8.6.17-1 [800 kB] Fetched 800 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qurwyru/libtk8.6_8.6.17-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5dbus5t64 riscv64 5.15.17+dfsg-4 [224 kB] Fetched 224 kB in 0s (3885 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5qe6oy9a/libqt5dbus5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwxgtk-gl3.2-1t64 riscv64 3.2.8+dfsg-2 [85.6 kB] Fetched 85.6 kB in 0s (1574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2uy72xes/libwxgtk-gl3.2-1t64_3.2.8+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libglib2.0-0t64 riscv64 2.86.1-1 [1550 kB] Fetched 1550 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphx1_g8h9/libglib2.0-0t64_2.86.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxss1 riscv64 1:1.2.3-1+b3 [16.9 kB] Fetched 16.9 kB in 0s (323 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpbohcu_9b/libxss1_1.2.3-1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxext6 riscv64 2:1.3.4-1+b3 [51.7 kB] Fetched 51.7 kB in 0s (2449 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1anudla7/libxext6_1.3.4-1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-dev riscv64 3.13.7-1 [10.5 kB] Fetched 10.5 kB in 0s (200 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_jzkk34/libpython3-dev_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pymol-data all 3.1.0+dfsg-1 [1430 kB] Fetched 1430 kB in 2s (925 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_xk69w1/pymol-data_3.1.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnotify4 riscv64 0.8.6-2 [26.4 kB] Fetched 26.4 kB in 0s (498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0js1bufn/libnotify4_0.8.6-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtcl8.6 riscv64 8.6.17+dfsg-1 [1066 kB] Fetched 1066 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprni_zscs/libtcl8.6_8.6.17+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-bin riscv64 2.41-12 [606 kB] Fetched 606 kB in 0s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvu_bb5wy/libc-bin_2.41-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 file riscv64 1:5.46-5 [43.4 kB] Fetched 43.4 kB in 0s (1907 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpbeokxrpm/file_5.46-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgcrypt20 riscv64 1.11.2-2 [870 kB] Fetched 870 kB in 0s (12.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdnj5ae1/libgcrypt20_1.11.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgprofng0 riscv64 2.45-7 [717 kB] Fetched 717 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyoo9r2jr/libgprofng0_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libimagequant0 riscv64 4.4.0-3 [244 kB] Fetched 244 kB in 0s (4214 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kvib1k1/libimagequant0_4.4.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxrandr2 riscv64 2:1.5.4-1+b3 [37.0 kB] Fetched 37.0 kB in 0s (1810 kB/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmplf6spt_e/libxrandr2_1.5.4-1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libngtcp2-crypto-ossl-dev riscv64 1.16.0-1 [51.8 kB] Fetched 51.8 kB in 0s (971 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3fq9ltlu/libngtcp2-crypto-ossl-dev_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libffi8 riscv64 3.5.2-2 [21.8 kB] Fetched 21.8 kB in 0s (1089 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpemjh1zwe/libffi8_3.5.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debianutils riscv64 5.23.2 [91.7 kB] Fetched 91.7 kB in 0s (4202 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkp1glf5h/debianutils_5.23.2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Fetched 319 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy7pae1dq/libjs-jquery_3.7.1+dfsg+~3.5.33-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libngtcp2-crypto-gnutls8 riscv64 1.16.0-1 [25.3 kB] Fetched 25.3 kB in 0s (480 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ma18vp5/libngtcp2-crypto-gnutls8_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblerc4 riscv64 4.0.0+ds-5 [181 kB] Fetched 181 kB in 0s (7645 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeap0oun7/liblerc4_4.0.0+ds-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwacom9 riscv64 2.16.1-1 [25.8 kB] Fetched 25.8 kB in 0s (488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzffdn36w/libwacom9_2.16.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5printsupport5t64 riscv64 5.15.17+dfsg-4 [208 kB] Fetched 208 kB in 0s (3641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvp8cnuhx/libqt5printsupport5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (1095 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmpik1oe8lq/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xinerama0 riscv64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (1912 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dx856lg/libxcb-xinerama0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm-amdgpu1 riscv64 2.4.127-1 [23.1 kB] Fetched 23.1 kB in 0s (1136 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuhlgc2s0/libdrm-amdgpu1_2.4.127-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgfortran5 riscv64 15.2.0-4 [421 kB] Fetched 421 kB in 0s (6834 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvzpfn4fq/libgfortran5_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hdf5-helpers riscv64 1.14.5+repack-4 [26.7 kB] Fetched 26.7 kB in 0s (498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1lecozpu/hdf5-helpers_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (259 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9o_h2yhr/python3-autocommand_2.2.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsz2 riscv64 1.1.4-2 [7900 B] Fetched 7900 B in 0s (150 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7bars8m8/libsz2_1.1.4-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxfixes3 riscv64 1:6.0.0-2+b4 [20.3 kB] Fetched 20.3 kB in 0s (1006 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpcu743c1p/libxfixes3_6.0.0-2+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libitm1 riscv64 15.2.0-4 [25.5 kB] Fetched 25.5 kB in 0s (482 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5vlos851/libitm1_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam0g riscv64 1.7.0-5 [70.2 kB] Fetched 70.2 kB in 0s (3293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvms75cx_/libpam0g_1.7.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gettext-base riscv64 0.23.1-2+b1 [243 kB] Fetched 243 kB in 0s (4209 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4i1ihi_n/gettext-base_0.23.1-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpsl5t64 riscv64 0.21.2-1.1+b1 [57.3 kB] Fetched 57.3 kB in 0s (2739 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyghxj1re/libpsl5t64_0.21.2-1.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-files riscv64 14 [72.9 kB] Fetched 72.9 kB in 0s (3401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0cfuth0w/base-files_14_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgnutls30t64 riscv64 3.8.10-2 [1463 kB] Fetched 1463 kB in 0s (15.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn70irkvy/libgnutls30t64_3.8.10-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 cpp-15 riscv64 15.2.0-4 [1272 B] Fetched 1272 B in 0s (24.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9o1hbkb/cpp-15_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 adwaita-icon-theme all 49.0-1 [507 kB] Fetched 507 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp551nsuil/adwaita-icon-theme_49.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdeflate0 riscv64 1.23-2 [38.8 kB] Fetched 38.8 kB in 0s (1896 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8jwi0k9n/libdeflate0_1.23-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 perl-modules-5.40 all 5.40.1-6 [3019 kB] Fetched 3019 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpylm4g2z7/perl-modules-5.40_5.40.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pybind11-dev all 3.0.1-2 [240 kB] Fetched 240 kB in 0s (4162 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptv5ejprt/pybind11-dev_3.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzma5 riscv64 5.8.1-2 [312 kB] Fetched 312 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ahdhnmf/liblzma5_5.8.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (3908 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9skg540/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fftw2 riscv64 2.1.5-7+b1 [212 kB] Fetched 212 kB in 0s (3717 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvt5xvdxj/fftw2_2.1.5-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnettle8t64 riscv64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp54a_wohj/libnettle8t64_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzf1 riscv64 3.6-4+b3 [9984 B] Fetched 9984 B in 0s (190 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf_i44v_n/liblzf1_3.6-4+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libclipper2 riscv64 2.1.20201109-2+b3 [1155 kB] Fetched 1155 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxbr1tohy/libclipper2_2.1.20201109-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-attr all 25.4.0-1 [73.1 kB] Fetched 73.1 kB in 0s (1355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2zrqkmyu/python3-attr_25.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-fonttools riscv64 4.57.0-2 [1427 kB] Fetched 1427 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprmo6apk7/python3-fonttools_4.57.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbrotli1 riscv64 1.1.0-2+b7 [358 kB] Fetched 358 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5qcp9sh8/libbrotli1_1.1.0-2+b7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl riscv64 3.5.4-1 [1474 kB] Fetched 1474 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph522cw9d/openssl_3.5.4-1_riscv64.deb' Downloading dependency 125 of 631: xml-core:riscv64=0.19 Downloading dependency 126 of 631: python3-pyqt5.sip:riscv64=12.17.1-1 Downloading dependency 127 of 631: fonts-lyx:riscv64=2.4.4-2 Downloading dependency 128 of 631: libapparmor1:riscv64=4.1.0-1 Downloading dependency 129 of 631: liblzma-dev:riscv64=5.8.1-2 Downloading dependency 130 of 631: groff-base:riscv64=1.23.0-9 Downloading dependency 131 of 631: libpython3.13-stdlib:riscv64=3.13.9-1 Downloading dependency 132 of 631: libfftw3-dev:riscv64=3.3.10-2+b1 Downloading dependency 133 of 631: fonts-dejavu-core:riscv64=2.37-8 Downloading dependency 134 of 631: libseccomp2:riscv64=2.6.0-2 Downloading dependency 135 of 631: libaudit-common:riscv64=1:4.1.2-1 Downloading dependency 136 of 631: python3-all:riscv64=3.13.7-1 Downloading dependency 137 of 631: libqt5sql5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 138 of 631: libjbig-dev:riscv64=2.1-6.1+b2 Downloading dependency 139 of 631: libicu76:riscv64=76.1-4 Downloading dependency 140 of 631: libwacom-common:riscv64=2.16.1-1 Downloading dependency 141 of 631: libgpg-error0:riscv64=1.56-2 Downloading dependency 142 of 631: libboost-serialization1.83-dev:riscv64=1.83.0-5 Downloading dependency 143 of 631: libjpeg-dev:riscv64=1:2.1.5-4 Downloading dependency 144 of 631: readline-common:riscv64=8.3-3 Downloading dependency 145 of 631: libglew2.2:riscv64=2.2.0-4+b2 Downloading dependency 146 of 631: libgcc-s1:riscv64=15.2.0-4 Downloading dependency 147 of 631: libstdc++-15-dev:riscv64=15.2.0-4 Downloading dependency 148 of 631: python3-pyparsing:riscv64=3.1.3-1 Downloading dependency 149 of 631: libldap-dev:riscv64=2.6.10+dfsg-1 Downloading dependency 150 of 631: libcrypt-dev:riscv64=1:4.4.38-1 Downloading dependency 151 of 631: libtsan2:riscv64=15.2.0-4 Downloading dependency 152 of 631: media-types:riscv64=14.0.0 Downloading dependency 153 of 631: python3-opengl:riscv64=3.1.10+dfsg-1 Downloading dependency 154 of 631: libcurl3t64-gnutls:riscv64=8.17.0~rc2-1 Downloading dependency 155 of 631: libkdb5-10t64:riscv64=1.21.3-5 Downloading dependency 156 of 631: libx11-data:riscv64=2:1.8.12-1 Downloading dependency 157 of 631: python3-urllib3:riscv64=2.5.0-1 Downloading dependency 158 of 631: tk8.6-blt2.5:riscv64=2.5.3+dfsg-8 Downloading dependency 159 of 631: python3-pygments:riscv64=2.18.0+dfsg-2 Downloading dependency 160 of 631: libdebhelper-perl:riscv64=13.28 Downloading dependency 161 of 631: libsmartcols1:riscv64=2.41.2-4 Downloading dependency 162 of 631: xz-utils:riscv64=5.8.1-2 Downloading dependency 163 of 631: binutils-common:riscv64=2.45-7 Downloading dependency 164 of 631: dh-strip-nondeterminism:riscv64=1.15.0-1 Downloading dependency 165 of 631: libboost-chrono1.83-dev:riscv64=1.83.0-5 Downloading dependency 166 of 631: jq:riscv64=1.8.1-4 Downloading dependency 167 of 631: libglu1-mesa-dev:riscv64=9.0.2-1.1+b3 Downloading dependency 168 of 631: perl:riscv64=5.40.1-6 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dependency 184 of 631: libevent-2.1-7t64:riscv64=2.1.12-stable-10+b1 Downloading dependency 185 of 631: findutils:riscv64=4.10.0-3 Downloading dependency 186 of 631: libglx-dev:riscv64=1.7.0-1+b2 Downloading dependency 187 of 631: libaec-dev:riscv64=1.1.4-2 Downloading dependency 188 of 631: libgav1-1:riscv64=0.19.0-3+b1 Downloading dependency 189 of 631: libexpat1-dev:riscv64=2.7.3-1 Downloading dependency 190 of 631: procps:riscv64=2:4.0.4-9 Downloading dependency 191 of 631: rpcsvc-proto:riscv64=1.4.3-1+b2 Downloading dependency 192 of 631: libwebpdemux2:riscv64=1.5.0-0.1 Downloading dependency 193 of 631: libjbig0:riscv64=2.1-6.1+b2 Downloading dependency 194 of 631: libopengl-dev:riscv64=1.7.0-1+b2 Downloading dependency 195 of 631: libtk8.6:riscv64=8.6.17-1 Downloading dependency 196 of 631: libqt5dbus5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 197 of 631: libwxgtk-gl3.2-1t64:riscv64=3.2.8+dfsg-2 Downloading dependency 198 of 631: libglib2.0-0t64:riscv64=2.86.1-1 Downloading dependency 199 of 631: libxss1:riscv64=1:1.2.3-1+b3 Downloading dependency 200 of 631: libxext6:riscv64=2:1.3.4-1+b3 Downloading dependency 201 of 631: libpython3-dev:riscv64=3.13.7-1 Downloading dependency 202 of 631: pymol-data:riscv64=3.1.0+dfsg-1 Downloading dependency 203 of 631: libnotify4:riscv64=0.8.6-2 Downloading dependency 204 of 631: libtcl8.6:riscv64=8.6.17+dfsg-1 Downloading dependency 205 of 631: libc-bin:riscv64=2.41-12 Downloading dependency 206 of 631: file:riscv64=1:5.46-5 Downloading dependency 207 of 631: libgcrypt20:riscv64=1.11.2-2 Downloading dependency 208 of 631: libgprofng0:riscv64=2.45-7 Downloading dependency 209 of 631: libimagequant0:riscv64=4.4.0-3 Downloading dependency 210 of 631: libxrandr2:riscv64=2:1.5.4-1+b3 Downloading dependency 211 of 631: libngtcp2-crypto-ossl-dev:riscv64=1.16.0-1 Downloading dependency 212 of 631: libffi8:riscv64=3.5.2-2 Downloading dependency 213 of 631: debianutils:riscv64=5.23.2 Downloading dependency 214 of 631: libjs-jquery:riscv64=3.7.1+dfsg+~3.5.33-1 Downloading dependency 215 of 631: libngtcp2-crypto-gnutls8:riscv64=1.16.0-1 Downloading dependency 216 of 631: liblerc4:riscv64=4.0.0+ds-5 Downloading dependency 217 of 631: libwacom9:riscv64=2.16.1-1 Downloading dependency 218 of 631: libqt5printsupport5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 219 of 631: xorg-sgml-doctools:riscv64=1:1.11-1.1 Downloading dependency 220 of 631: libxcb-xinerama0:riscv64=1.17.0-2+b1 Downloading dependency 221 of 631: libdrm-amdgpu1:riscv64=2.4.127-1 Downloading dependency 222 of 631: libgfortran5:riscv64=15.2.0-4 Downloading dependency 223 of 631: hdf5-helpers:riscv64=1.14.5+repack-4 Downloading dependency 224 of 631: python3-autocommand:riscv64=2.2.2-3 Downloading dependency 225 of 631: libsz2:riscv64=1.1.4-2 Downloading dependency 226 of 631: libxfixes3:riscv64=1:6.0.0-2+b4 Downloading dependency 227 of 631: libitm1:riscv64=15.2.0-4 Downloading dependency 228 of 631: libpam0g:riscv64=1.7.0-5 Downloading dependency 229 of 631: gettext-base:riscv64=0.23.1-2+b1 Downloading dependency 230 of 631: libpsl5t64:riscv64=0.21.2-1.1+b1 Downloading dependency 231 of 631: base-files:riscv64=14 Downloading dependency 232 of 631: libgnutls30t64:riscv64=3.8.10-2 Downloading dependency 233 of 631: cpp-15:riscv64=15.2.0-4 Downloading dependency 234 of 631: adwaita-icon-theme:riscv64=49.0-1 Downloading dependency 235 of 631: libdeflate0:riscv64=1.23-2 Downloading dependency 236 of 631: perl-modules-5.40:riscv64=5.40.1-6 Downloading dependency 237 of 631: pybind11-dev:riscv64=3.0.1-2 Downloading dependency 238 of 631: liblzma5:riscv64=5.8.1-2 Downloading dependency 239 of 631: python3-pkg-resources:riscv64=78.1.1-0.1 Downloading dependency 240 of 631: fftw2:riscv64=2.1.5-7+b1 Downloading dependency 241 of 631: libnettle8t64:riscv64=3.10.2-1 Downloading dependency 242 of 631: liblzf1:riscv64=3.6-4+b3 Downloading dependency 243 of 631: libclipper2:riscv64=2.1.20201109-2+b3 Downloading dependency 244 of 631: python3-attr:riscv64=25.4.0-1 Downloading dependency 245 of 631: python3-fonttools:riscv64=4.57.0-2 Downloading dependency 246 of 631: libbrotli1:riscv64=1.1.0-2+b7 Downloading dependency 247 of 631: openssl:riscv64=3.5.4-1 Downloading dependency 248 of 631: libfontconfig1:riscv64=2.15.0-2.4Get:1 http://deb.debian.org/debian unstable/main riscv64 libfontconfig1 riscv64 2.15.0-2.4 [399 kB] Fetched 399 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphham0iax/libfontconfig1_2.15.0-2.4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pil riscv64 12.0.0-1 [534 kB] Fetched 534 kB in 0s (8367 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1uluu7tw/python3-pil_12.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libccp4-data all 8.0.0-5 [62.5 kB] Fetched 62.5 kB in 1s (64.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wnotjjs/libccp4-data_8.0.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libkeyutils1 riscv64 1.6.3-6 [9480 B] Fetched 9480 B in 0s (472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp259uxdqr/libkeyutils1_1.6.3-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libthai0 riscv64 0.1.29-2+b1 [49.2 kB] Fetched 49.2 kB in 0s (2373 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl995m6yi/libthai0_0.1.29-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libvulkan1 riscv64 1.4.321.0-1 [132 kB] Fetched 132 kB in 0s (2372 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpycl4_6dd/libvulkan1_1.4.321.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libantlr3c-3.4-0 riscv64 3.4+dfsg-4+b2 [50.4 kB] Fetched 50.4 kB in 0s (938 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3jb1hpwg/libantlr3c-3.4-0_3.4+dfsg-4+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgles2 riscv64 1.7.0-1+b2 [21.0 kB] Fetched 21.0 kB in 0s (391 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptva557m9/libgles2_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-keysyms1 riscv64 0.4.1-1 [16.6 kB] Fetched 16.6 kB in 0s (824 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8exqtuk6/libxcb-keysyms1_0.4.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 man-db riscv64 2.13.1-1 [1458 kB] Fetched 1458 kB in 0s (28.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyuqeonqs/man-db_2.13.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libncursesw6 riscv64 6.5+20250216-2 [141 kB] Fetched 141 kB in 0s (2519 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptbwqhymm/libncursesw6_6.5+20250216-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-cpp-310 riscv64 1.14.5+repack-4 [131 kB] Fetched 131 kB in 0s (2350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1vbaseuk/libhdf5-cpp-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdatrie1 riscv64 0.2.13-4 [38.4 kB] Fetched 38.4 kB in 0s (1881 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpaxc_s0/libdatrie1_0.2.13-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libubsan1 riscv64 15.2.0-4 [1177 kB] Fetched 1177 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe1844sl1/libubsan1_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-platformdirs all 4.4.0-1 [16.7 kB] Fetched 16.7 kB in 0s (293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqyrbxdub/python3-platformdirs_4.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-dev riscv64 3.13.7-1 [26.1 kB] Fetched 26.1 kB in 0s (492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahl4onf6/python3-dev_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-cpp-310 riscv64 1.14.5+repack-4 [24.3 kB] Fetched 24.3 kB in 0s (459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp_71mw31/libhdf5-hl-cpp-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libz3-4 riscv64 4.13.3-1 [8514 kB] Fetched 8514 kB in 0s (35.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkgib590/libz3-4_4.13.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmqjw5f17/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-wxgtk4.0 riscv64 4.2.3+dfsg-2 [7263 kB] Fetched 7263 kB in 1s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsaw4d9yr/python3-wxgtk4.0_4.2.3+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssl3t64 riscv64 3.5.4-1 [2206 kB] Fetched 2206 kB in 0s (33.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_wamljsl/libssl3t64_3.5.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (2849 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpntwhstkh/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsemanage-common all 3.9-1 [7888 B] Fetched 7888 B in 0s (150 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnfv1a478/libsemanage-common_3.9-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 krb5-multidev riscv64 1.21.3-5 [126 kB] Fetched 126 kB in 0s (2244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqwuk28_5/krb5-multidev_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-python-dev riscv64 1.83.0.2+b2 [3880 B] Fetched 3880 B in 0s (73.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnl_1wwlw/libboost-python-dev_1.83.0.2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-system1.83.0 riscv64 1.83.0-5 [230 kB] Fetched 230 kB in 0s (4005 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg9vy2gq5/libboost-system1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-mpmath all 1.3.0-2 [419 kB] Fetched 419 kB in 0s (6813 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps7g25t69/python3-mpmath_1.3.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qtuvvzj/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libccp4-dev riscv64 8.0.0-5 [43.0 kB] Fetched 43.0 kB in 1s (56.7 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwbc1thwi/libccp4-dev_8.0.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (217 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsd_8pe2o/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-date-time1.83-dev riscv64 1.83.0-5 [239 kB] Fetched 239 kB in 0s (4145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzl965qkw/libboost-date-time1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkadm5srv-mit12 riscv64 1.21.3-5 [54.9 kB] Fetched 54.9 kB in 0s (1021 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_6c34gp/libkadm5srv-mit12_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp riscv64 4:15.2.0-4 [1572 B] Fetched 1572 B in 0s (75.5 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_nn4ptqk/cpp_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-fs all 2.4.16-8 [95.2 kB] Fetched 95.2 kB in 0s (1743 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp60iywuqw/python3-fs_2.4.16-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssl-dev riscv64 3.5.4-1 [6304 kB] Fetched 6304 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnc_589n6/libssl-dev_3.5.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsepol2 riscv64 3.9-2 [306 kB] Fetched 306 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplat8kubl/libsepol2_3.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-thread1.83-dev riscv64 1.83.0-5 [445 kB] Fetched 445 kB in 0s (7151 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaqjdyduu/libboost-thread1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglvnd0 riscv64 1.7.0-1+b2 [62.6 kB] Fetched 62.6 kB in 0s (2966 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5q1u5tyq/libglvnd0_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproc2-0 riscv64 2:4.0.4-9 [65.9 kB] Fetched 65.9 kB in 0s (1209 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_riscv64.deb' to '/srv/rebuilderd/tmp/tmpl8mpdosr/libproc2-0_4.0.4-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libatk-bridge2.0-0t64 riscv64 2.58.1-1 [69.1 kB] Fetched 69.1 kB in 0s (1278 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5487uq6v/libatk-bridge2.0-0t64_2.58.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssm2 riscv64 1.4.0-2+b3 [82.2 kB] Fetched 82.2 kB in 0s (1505 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltqzlnsa/libssm2_1.4.0-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-riscv64-linux-gnu riscv64 4:15.2.0-4 [5284 B] Fetched 5284 B in 0s (266 kB/s) dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmptkjvmpup/cpp-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssm-dev riscv64 1.4.0-2+b3 [15.2 kB] Fetched 15.2 kB in 0s (288 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa74yutcg/libssm-dev_1.4.0-2+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libatspi2.0-0t64 riscv64 2.58.1-1 [80.5 kB] Fetched 80.5 kB in 0s (1484 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpof8itx6k/libatspi2.0-0t64_2.58.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzopfli1 riscv64 1.0.3-3 [106 kB] Fetched 106 kB in 0s (1933 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwb9203k/libzopfli1_1.0.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-tqdm all 4.67.1-6 [90.9 kB] Fetched 90.9 kB in 0s (1662 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplran8qk9/python3-tqdm_4.67.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librtmp-dev riscv64 2.4+20151223.gitfa8646d.1-3 [119 kB] Fetched 119 kB in 0s (2162 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprrt4oyi3/librtmp-dev_2.4+20151223.gitfa8646d.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnghttp2-dev riscv64 1.64.0-1.1+b1 [220 kB] Fetched 220 kB in 0s (3832 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9b9ed80j/libnghttp2-dev_1.64.0-1.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-charset-normalizer riscv64 3.4.3-1 [131 kB] Fetched 131 kB in 0s (2352 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfgmothii/python3-charset-normalizer_3.4.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-lz4 riscv64 4.4.4+dfsg-3 [25.2 kB] Fetched 25.2 kB in 0s (478 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp45a24aji/python3-lz4_4.4.4+dfsg-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5test5t64 riscv64 5.15.17+dfsg-4 [149 kB] Fetched 149 kB in 0s (2654 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnefawljj/libqt5test5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libyuv0 riscv64 0.0.1919.20250919-1 [113 kB] Fetched 113 kB in 0s (2053 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl1z0rpyd/libyuv0_0.0.1919.20250919-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-matplotlib riscv64 3.10.7+dfsg1-1 [22.6 MB] Fetched 22.6 MB in 1s (22.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxaldsy28/python3-matplotlib_3.10.7+dfsg1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-stdlib riscv64 3.13.7-1 [10.2 kB] Fetched 10.2 kB in 0s (490 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7z_n1z34/libpython3-stdlib_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmmdb2-dev riscv64 2.0.22-1+b2 [92.9 kB] Fetched 92.9 kB in 0s (1698 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkoc9iovw/libmmdb2-dev_2.0.22-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmount1 riscv64 2.41.2-4 [226 kB] Fetched 226 kB in 0s (9109 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2fn832jh/libmount1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpsl-dev riscv64 0.21.2-1.1+b1 [87.2 kB] Fetched 87.2 kB in 0s (1586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgmq6k8tv/libpsl-dev_0.21.2-1.1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssh2-1-dev riscv64 1.11.1-1 [560 kB] Fetched 560 kB in 0s (8664 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnnzhjoyf/libssh2-1-dev_1.11.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 passwd riscv64 1:4.18.0-2 [1284 kB] Fetched 1284 kB in 0s (27.5 MB/s) dpkg-name: info: moved 'passwd_1%3a4.18.0-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1k6znii6/passwd_4.18.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgtk-3-common all 3.24.51-1 [4922 kB] Fetched 4922 kB in 0s (40.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ygedprk/libgtk-3-common_3.24.51-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit1 riscv64 1:4.1.2-1 [58.2 kB] Fetched 58.2 kB in 0s (2773 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpexmztse3/libaudit1_4.1.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmtdev1t64 riscv64 1.1.7-1 [22.6 kB] Fetched 22.6 kB in 0s (427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1lwuz6_/libmtdev1t64_1.1.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm-compat4t64 riscv64 1.26-1 [52.9 kB] Fetched 52.9 kB in 0s (2545 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaaydforl/libgdbm-compat4t64_1.26-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-util1 riscv64 0.4.1-1 [23.2 kB] Fetched 23.2 kB in 0s (439 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq501lk5g/libxcb-util1_0.4.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libstdc++6 riscv64 15.2.0-4 [714 kB] Fetched 714 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp430mr3yy/libstdc++6_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libsframe2 riscv64 2.45-7 [80.5 kB] Fetched 80.5 kB in 0s (1480 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmped1gmutu/libsframe2_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-iniconfig all 2.1.0-1 [7432 B] Fetched 7432 B in 0s (140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7xoa48yv/python3-iniconfig_2.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pil.imagetk riscv64 12.0.0-1 [80.9 kB] Fetched 80.9 kB in 0s (1492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9s5bjcnt/python3-pil.imagetk_12.0.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-tk riscv64 3.13.9-1 [106 kB] Fetched 106 kB in 0s (1941 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd38ghrgq/python3.13-tk_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 scons all 4.8.1+dfsg-1 [548 kB] Fetched 548 kB in 0s (8510 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinjfizqv/scons_4.8.1+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavif16 riscv64 1.3.0-1+b1 [138 kB] Fetched 138 kB in 0s (2483 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1mrlnyy5/libavif16_1.3.0-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pkgconf-bin riscv64 1.8.1-4 [29.8 kB] Fetched 29.8 kB in 0s (1466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2m6a2ma/pkgconf-bin_1.8.1-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcc1-0 riscv64 15.2.0-4 [40.2 kB] Fetched 40.2 kB in 0s (754 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2ws_7t2/libcc1-0_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 w3c-sgml-lib all 1.3-3 [273 kB] Fetched 273 kB in 0s (4664 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4qjgucf_/w3c-sgml-lib_1.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhogweed6t64 riscv64 3.10.2-1 [336 kB] Fetched 336 kB in 0s (12.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo4qvjbxq/libhogweed6t64_3.10.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdamage1 riscv64 1:1.1.6-1+b2 [15.3 kB] Fetched 15.3 kB in 0s (749 kB/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.6-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpn9_s8btx/libxdamage1_1.1.6-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-10 [60.6 kB] Fetched 60.6 kB in 0s (2851 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpp74aq9/libsasl2-2_2.1.28+dfsg1-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdouble-conversion3 riscv64 3.3.1-2 [42.2 kB] Fetched 42.2 kB in 0s (794 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdvl256c/libdouble-conversion3_3.3.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnl-route-3-200 riscv64 3.11.0-2 [193 kB] Fetched 193 kB in 0s (3396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq9o2tt6o/libnl-route-3-200_3.11.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ibzhosd/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwxgtk3.2-1t64 riscv64 3.2.8+dfsg-2 [4621 kB] Fetched 4621 kB in 0s (26.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdwvqfku8/libwxgtk3.2-1t64_3.2.8+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-client3 riscv64 0.8-17 [48.2 kB] Fetched 48.2 kB in 0s (2321 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp548zhsra/libavahi-client3_0.8-17_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-rlpycairo all 0.3.0-4 [10.1 kB] Fetched 10.1 kB in 0s (192 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq1yet6lc/python3-rlpycairo_0.3.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libopengl0 riscv64 1.7.0-1+b2 [40.4 kB] Fetched 40.4 kB in 0s (1960 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz031bx1z/libopengl0_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sphinx-rtd-theme-common all 3.0.2+dfsg-3 [1023 kB] Fetched 1023 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4uond5sy/sphinx-rtd-theme-common_3.0.2+dfsg-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyqt5.qtopengl riscv64 5.15.11+dfsg-3 [210 kB] Fetched 210 kB in 1s (181 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxc8xtsw7/python3-pyqt5.qtopengl_5.15.11+dfsg-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdeflate-dev riscv64 1.23-2 [80.1 kB] Fetched 80.1 kB in 0s (3345 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjca7485a/libdeflate-dev_1.23-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules-bin riscv64 1.7.0-5 [49.3 kB] Fetched 49.3 kB in 0s (2360 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd2lrge6g/libpam-modules-bin_1.7.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gzip riscv64 1.13-1 [139 kB] Fetched 139 kB in 0s (6147 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv25m_7cz/gzip_1.13-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfuse3-4 riscv64 3.17.4-1 [97.8 kB] Fetched 97.8 kB in 0s (1786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpylo7n0hd/libfuse3-4_3.17.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdrm2 riscv64 2.4.127-1 [40.4 kB] Fetched 40.4 kB in 0s (1904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplv0zoc_d/libdrm2_2.4.127-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libngtcp2-16 riscv64 1.16.0-1 [141 kB] Fetched 141 kB in 0s (6141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_5pydamb/libngtcp2-16_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB] Fetched 33.0 kB in 0s (621 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprwze0icy/python3-ufolib2_0.17.1+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-serialization1.83.0 riscv64 1.83.0-5 [334 kB] Fetched 334 kB in 0s (5590 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4396w4od/libboost-serialization1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xfonts-utils riscv64 1:7.7+7 [91.9 kB] Fetched 91.9 kB in 0s (1657 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_riscv64.deb' to '/srv/rebuilderd/tmp/tmp54nuxd43/xfonts-utils_7.7+7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbrotli-dev riscv64 1.1.0-2+b7 [798 kB] Fetched 798 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjlfhiji4/libbrotli-dev_1.1.0-2+b7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sgml-base all 1.31+nmu1 [10.9 kB] Fetched 10.9 kB in 0s (537 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1gpjx3ma/sgml-base_1.31+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ibverbs-providers riscv64 56.1-1+b1 [382 kB] Fetched 382 kB in 0s (6288 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbur9379g/ibverbs-providers_56.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 at-spi2-common all 2.58.1-1 [173 kB] Fetched 173 kB in 0s (3069 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqfo8dzpf/at-spi2-common_2.58.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-all-dev riscv64 3.13.7-1 [1068 B] Fetched 1068 B in 0s (20.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph515hqwi/libpython3-all-dev_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwayland-egl1 riscv64 1.24.0-2+b1 [6116 B] Fetched 6116 B in 0s (303 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeoy2d1zv/libwayland-egl1_1.24.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1 riscv64 2.7.3-1 [106 kB] Fetched 106 kB in 0s (4748 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp0hutek4/libexpat1_2.7.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fontconfig-config riscv64 2.15.0-2.4 [318 kB] Fetched 318 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcsln85hs/fontconfig-config_2.15.0-2.4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-system1.83-dev riscv64 1.83.0-5 [232 kB] Fetched 232 kB in 0s (4029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2qwn8vlp/libboost-system1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-shape0 riscv64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (1921 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_8jmtjg/libxcb-shape0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxau-dev riscv64 1:1.0.11-1 [27.6 kB] Fetched 27.6 kB in 0s (1367 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpq0806f9d/libxau-dev_1.0.11-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (157 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptez_lud9/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcairo2 riscv64 1.18.4-1+b1 [544 kB] Fetched 544 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1wa9qwu8/libcairo2_1.18.4-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libisl23 riscv64 0.27-1 [664 kB] Fetched 664 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmbfxiooj/libisl23_0.27-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkrb5-dev riscv64 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (306 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3hiqu97a/libkrb5-dev_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtiffxx6 riscv64 4.7.1-1 [174 kB] Fetched 174 kB in 0s (7390 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx8ll3kkh/libtiffxx6_4.7.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxshmfence1 riscv64 1.3.3-1 [10.9 kB] Fetched 10.9 kB in 0s (203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1uske8v7/libxshmfence1_1.3.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libopenmpi40 riscv64 5.0.8-10+b1 [2309 kB] Fetched 2309 kB in 0s (22.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_75xfuu/libopenmpi40_5.0.8-10+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libatomic1 riscv64 15.2.0-4 [8532 B] Fetched 8532 B in 0s (141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mkhonud/libatomic1_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-nxmx all 0.0.4-1 [16.1 kB] Fetched 16.1 kB in 1s (28.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_xx4afp/python3-nxmx_0.0.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpangocairo-1.0-0 riscv64 1.56.3-2 [35.0 kB] Fetched 35.0 kB in 0s (1663 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsa0r4hjh/libpangocairo-1.0-0_1.56.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdk-pixbuf-2.0-0 riscv64 2.44.4+dfsg-1 [141 kB] Fetched 141 kB in 0s (6184 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0m3js8rf/libgdk-pixbuf-2.0-0_2.44.4+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (1900 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgcyhx58r/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-psutil riscv64 7.1.0-1 [224 kB] Fetched 224 kB in 0s (3892 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph48b849_/python3-psutil_7.1.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-riscv64-linux-gnu riscv64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (72.0 kB/s) dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpq0f17dmn/gcc-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (600 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwzmc5qqq/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-glx0 riscv64 1.17.0-2+b1 [123 kB] Fetched 123 kB in 0s (5453 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3bzgoc5/libxcb-glx0_1.17.0-2+b1_riscv64.deb' Downloading dependency 249 of 631: python3-pil:riscv64=12.0.0-1 Downloading dependency 250 of 631: libccp4-data:riscv64=8.0.0-5 Downloading dependency 251 of 631: libkeyutils1:riscv64=1.6.3-6 Downloading dependency 252 of 631: libthai0:riscv64=0.1.29-2+b1 Downloading dependency 253 of 631: libvulkan1:riscv64=1.4.321.0-1 Downloading dependency 254 of 631: libantlr3c-3.4-0:riscv64=3.4+dfsg-4+b2 Downloading dependency 255 of 631: libgles2:riscv64=1.7.0-1+b2 Downloading dependency 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libyuv0:riscv64=0.0.1919.20250919-1 Downloading dependency 300 of 631: python3-matplotlib:riscv64=3.10.7+dfsg1-1 Downloading dependency 301 of 631: libpython3-stdlib:riscv64=3.13.7-1 Downloading dependency 302 of 631: libmmdb2-dev:riscv64=2.0.22-1+b2 Downloading dependency 303 of 631: libmount1:riscv64=2.41.2-4 Downloading dependency 304 of 631: libpsl-dev:riscv64=0.21.2-1.1+b1 Downloading dependency 305 of 631: libssh2-1-dev:riscv64=1.11.1-1 Downloading dependency 306 of 631: passwd:riscv64=1:4.18.0-2 Downloading dependency 307 of 631: libgtk-3-common:riscv64=3.24.51-1 Downloading dependency 308 of 631: libaudit1:riscv64=1:4.1.2-1 Downloading dependency 309 of 631: libmtdev1t64:riscv64=1.1.7-1 Downloading dependency 310 of 631: libgdbm-compat4t64:riscv64=1.26-1 Downloading dependency 311 of 631: libxcb-util1:riscv64=0.4.1-1 Downloading dependency 312 of 631: libstdc++6:riscv64=15.2.0-4 Downloading dependency 313 of 631: libsframe2:riscv64=2.45-7 Downloading dependency 314 of 631: 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libavahi-client3:riscv64=0.8-17 Downloading dependency 330 of 631: python3-rlpycairo:riscv64=0.3.0-4 Downloading dependency 331 of 631: libopengl0:riscv64=1.7.0-1+b2 Downloading dependency 332 of 631: sphinx-rtd-theme-common:riscv64=3.0.2+dfsg-3 Downloading dependency 333 of 631: python3-pyqt5.qtopengl:riscv64=5.15.11+dfsg-3 Downloading dependency 334 of 631: libdeflate-dev:riscv64=1.23-2 Downloading dependency 335 of 631: libpam-modules-bin:riscv64=1.7.0-5 Downloading dependency 336 of 631: gzip:riscv64=1.13-1 Downloading dependency 337 of 631: libfuse3-4:riscv64=3.17.4-1 Downloading dependency 338 of 631: libdrm2:riscv64=2.4.127-1 Downloading dependency 339 of 631: libngtcp2-16:riscv64=1.16.0-1 Downloading dependency 340 of 631: python3-ufolib2:riscv64=0.17.1+dfsg1-1 Downloading dependency 341 of 631: libboost-serialization1.83.0:riscv64=1.83.0-5 Downloading dependency 342 of 631: xfonts-utils:riscv64=1:7.7+7 Downloading dependency 343 of 631: libbrotli-dev:riscv64=1.1.0-2+b7 Downloading dependency 344 of 631: sgml-base:riscv64=1.31+nmu1 Downloading dependency 345 of 631: ibverbs-providers:riscv64=56.1-1+b1 Downloading dependency 346 of 631: at-spi2-common:riscv64=2.58.1-1 Downloading dependency 347 of 631: libpython3-all-dev:riscv64=3.13.7-1 Downloading dependency 348 of 631: libwayland-egl1:riscv64=1.24.0-2+b1 Downloading dependency 349 of 631: libexpat1:riscv64=2.7.3-1 Downloading dependency 350 of 631: fontconfig-config:riscv64=2.15.0-2.4 Downloading dependency 351 of 631: libboost-system1.83-dev:riscv64=1.83.0-5 Downloading dependency 352 of 631: libxcb-shape0:riscv64=1.17.0-2+b1 Downloading dependency 353 of 631: libxau-dev:riscv64=1:1.0.11-1 Downloading dependency 354 of 631: python3-jaraco.context:riscv64=6.0.1-1 Downloading dependency 355 of 631: libcairo2:riscv64=1.18.4-1+b1 Downloading dependency 356 of 631: libisl23:riscv64=0.27-1 Downloading dependency 357 of 631: libkrb5-dev:riscv64=1.21.3-5 Downloading dependency 358 of 631: libtiffxx6:riscv64=4.7.1-1 Downloading dependency 359 of 631: libxshmfence1:riscv64=1.3.3-1 Downloading dependency 360 of 631: libopenmpi40:riscv64=5.0.8-10+b1 Downloading dependency 361 of 631: libatomic1:riscv64=15.2.0-4 Downloading dependency 362 of 631: python3-nxmx:riscv64=0.0.4-1 Downloading dependency 363 of 631: libpangocairo-1.0-0:riscv64=1.56.3-2 Downloading dependency 364 of 631: libgdk-pixbuf-2.0-0:riscv64=2.44.4+dfsg-1 Downloading dependency 365 of 631: init-system-helpers:riscv64=1.69 Downloading dependency 366 of 631: python3-psutil:riscv64=7.1.0-1 Downloading dependency 367 of 631: gcc-riscv64-linux-gnu:riscv64=4:15.2.0-4 Downloading dependency 368 of 631: dh-autoreconf:riscv64=21 Downloading dependency 369 of 631: libxcb-glx0:riscv64=1.17.0-2+b1 Downloading dependency 370 of 631: libgomp1:riscv64=15.2.0-4Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgomp1 riscv64 15.2.0-4 [131 kB] Fetched 131 kB in 0s (2374 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvmb8mqhi/libgomp1_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-lato all 2.015-1 [2780 kB] Fetched 2780 kB in 0s (23.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk5w24bol/fonts-lato_2.015-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (2890 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcevmy9cb/ca-certificates_20250419_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libraqm0 riscv64 0.10.3-1 [13.9 kB] Fetched 13.9 kB in 0s (263 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoiu3wyp9/libraqm0_0.10.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.46-1 [301 kB] Fetched 301 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzljwp_a0/libpcre2-8-0_10.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgl1 riscv64 1.7.0-1+b2 [115 kB] Fetched 115 kB in 0s (5107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq7qhvqcx/libgl1_1.7.0-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtasn1-6-dev riscv64 4.20.0-2 [149 kB] Fetched 149 kB in 0s (2672 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpavnvh76d/libtasn1-6-dev_4.20.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (18.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpejllp86g/x11proto-dev_2024.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libibverbs1 riscv64 56.1-1+b1 [62.9 kB] Fetched 62.9 kB in 0s (1166 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa185u584/libibverbs1_56.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (807 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp2jy7k0_d/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtiff-dev riscv64 4.7.1-1 [837 kB] Fetched 837 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpotx_ysyg/libtiff-dev_4.7.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libsystemd0 riscv64 258.1-1 [477 kB] Fetched 477 kB in 0s (7531 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplc6i6l83/libsystemd0_258.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (8893 kB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmpzby1r551/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcurl4t64 riscv64 8.17.0~rc2-1 [413 kB] Fetched 413 kB in 0s (6713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbtwgb0e/libcurl4t64_8.17.0~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcomposite1 riscv64 1:0.4.6-1 [16.3 kB] Fetched 16.3 kB in 0s (813 kB/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmptcra_jlz/libxcomposite1_0.4.6-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libattr1 riscv64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (1133 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp0f_krk69/libattr1_2.5.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnl-3-200 riscv64 3.11.0-2 [61.1 kB] Fetched 61.1 kB in 0s (1135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_xpkyig3/libnl-3-200_3.11.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 g++-15 riscv64 15.2.0-4 [23.4 kB] Fetched 23.4 kB in 0s (445 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjnhqjpmd/g++-15_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-dateutil all 2.9.0-4 [79.4 kB] Fetched 79.4 kB in 0s (1467 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_92x69vd/python3-dateutil_2.9.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-cycler all 0.12.1-2 [9616 B] Fetched 9616 B in 0s (183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8wavvngj/python3-cycler_0.12.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (9848 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1e5xc2u_/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglu1-mesa riscv64 9.0.2-1.1+b3 [180 kB] Fetched 180 kB in 0s (3174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfudp2rpl/libglu1-mesa_9.0.2-1.1+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 architecture-properties riscv64 0.2.6 [2336 B] Fetched 2336 B in 0s (44.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0zlyu_h9/architecture-properties_0.2.6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 shared-mime-info riscv64 2.4-5+b3 [756 kB] Fetched 756 kB in 0s (21.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcn7tfsv/shared-mime-info_2.4-5+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-icccm4 riscv64 0.4.2-1 [26.9 kB] Fetched 26.9 kB in 0s (510 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsmc0axmu/libxcb-icccm4_0.4.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-fortran-310 riscv64 1.14.5+repack-4 [114 kB] Fetched 114 kB in 0s (2077 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu8jptpnj/libhdf5-fortran-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhwloc15 riscv64 2.12.2-1 [158 kB] Fetched 158 kB in 0s (2825 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpolgd3x3j/libhwloc15_2.12.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbsd0 riscv64 0.12.2-2 [132 kB] Fetched 132 kB in 0s (5737 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6eqqjv_0/libbsd0_0.12.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libibmad5 riscv64 56.1-1+b1 [44.9 kB] Fetched 44.9 kB in 0s (845 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6npturb3/libibmad5_56.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgnutls28-dev riscv64 3.8.10-2 [2648 kB] Fetched 2648 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8r6sz75c/libgnutls28-dev_3.8.10-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebp7 riscv64 1.5.0-0.1 [286 kB] Fetched 286 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkloti2ds/libwebp7_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++ riscv64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (67.5 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp9u739chp/g++_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libx11-xcb1 riscv64 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (9767 kB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyuvq00tb/libx11-xcb1_1.8.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 mawk riscv64 1.3.4.20250131-1 [142 kB] Fetched 142 kB in 0s (6048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwr5i3cx7/mawk_1.3.4.20250131-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 coreutils riscv64 9.7-3 [3036 kB] Fetched 3036 kB in 0s (36.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08047r61/coreutils_9.7-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqhull-r8.0 riscv64 2020.2-7 [248 kB] Fetched 248 kB in 0s (4250 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsdyzb7f_/libqhull-r8.0_2020.2-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 login.defs all 1:4.18.0-2 [211 kB] Fetched 211 kB in 0s (3698 kB/s) dpkg-name: info: moved 'login.defs_1%3a4.18.0-2_all.deb' to '/srv/rebuilderd/tmp/tmpamjafg25/login.defs_4.18.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dwz riscv64 0.16-2 [115 kB] Fetched 115 kB in 0s (5158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp65lbw3__/dwz_0.16-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgssrpc4t64 riscv64 1.21.3-5 [60.7 kB] Fetched 60.7 kB in 0s (1127 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpue_121er/libgssrpc4t64_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5network5t64 riscv64 5.15.17+dfsg-4 [709 kB] Fetched 709 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfcfdvwxx/libqt5network5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-idna all 3.10-1 [42.0 kB] Fetched 42.0 kB in 0s (789 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8o8bhdv0/python3-idna_3.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-minimal riscv64 3.13.7-1 [27.2 kB] Fetched 27.2 kB in 0s (1328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnn6dz65/python3-minimal_3.13.7-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251028T025150Z sid/main riscv64 python3-scipy riscv64 1.16.2-3 [16.4 MB] Fetched 16.4 MB in 1s (20.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm02abiep/python3-scipy_1.16.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb1-dev riscv64 1.17.0-2+b1 [241 kB] Fetched 241 kB in 0s (9618 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_c2_hmft/libxcb1-dev_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsqlite3-0 riscv64 3.46.1-8 [910 kB] Fetched 910 kB in 0s (22.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkootscl/libsqlite3-0_3.46.1-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnghttp3-9 riscv64 1.12.0-1 [68.4 kB] Fetched 68.4 kB in 0s (3176 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpctltmaou/libnghttp3-9_1.12.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 cpp-15-riscv64-linux-gnu riscv64 15.2.0-4 [107 MB] Fetched 107 MB in 6s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6u8yccdg/cpp-15-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libegl-mesa0 riscv64 25.2.5-1 [121 kB] Fetched 121 kB in 1s (113 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwdifx8d/libegl-mesa0_25.2.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libevent-pthreads-2.1-7t64 riscv64 2.1.12-stable-10+b1 [54.1 kB] Fetched 54.1 kB in 1s (44.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaaxiu647/libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sed riscv64 4.9-2 [329 kB] Fetched 329 kB in 0s (5410 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw1h4wwn7/sed_4.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-dev-bin riscv64 2.41-12 [57.4 kB] Fetched 57.4 kB in 0s (2716 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvwe13qvy/libc-dev-bin_2.41-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Fetched 108 kB in 0s (1957 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpctzh9fco/python3-chardet_5.2.0+dfsg-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkrb5support0 riscv64 1.21.3-5 [34.0 kB] Fetched 34.0 kB in 0s (640 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn03odmxc/libkrb5support0_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-riscv64-linux-gnu riscv64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (60.3 kB/s) dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpa_r8rmqc/g++-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgnutls-dane0t64 riscv64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (7341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp776px5cl/libgnutls-dane0t64_3.8.10-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-2 [372 kB] Fetched 372 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc7pi_wiy/libzstd1_1.5.7+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-timer-dev riscv64 1.83.0.2+b2 [3712 B] Fetched 3712 B in 0s (71.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpayj4uq07/libboost-timer-dev_1.83.0.2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-minimal riscv64 3.13.9-1 [2169 kB] Fetched 2169 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcm_fo3fq/python3.13-minimal_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgl-dev riscv64 1.7.0-1+b2 [101 kB] Fetched 101 kB in 0s (4497 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_dtrvfi/libgl-dev_1.7.0-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 g++-15-riscv64-linux-gnu riscv64 15.2.0-4 [113 MB] Fetched 113 MB in 7s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7r_5i7ml/g++-15-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtiff6 riscv64 4.7.1-1 [354 kB] Fetched 354 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpicutx_vn/libtiff6_4.7.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libtinfo6 riscv64 6.5+20250216-2 [347 kB] Fetched 347 kB in 1s (258 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp11pbuvhw/libtinfo6_6.5+20250216-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpng16-16t64 riscv64 1.6.50-1 [286 kB] Fetched 286 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgemr26tx/libpng16-16t64_1.6.50-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebp-dev riscv64 1.5.0-0.1 [762 kB] Fetched 762 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0g31xx4h/libwebp-dev_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-reportlab all 4.4.4-2 [1170 kB] Fetched 1170 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgryrwqo/python3-reportlab_4.4.4-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libllvm19 riscv64 1:19.1.7-7 [24.8 MB] Fetched 24.8 MB in 1s (23.1 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-7_riscv64.deb' to '/srv/rebuilderd/tmp/tmpys12mjix/libllvm19_19.1.7-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsharpyuv0 riscv64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (5140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp225ux7xk/libsharpyuv0_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp94vpp4k0/libdpkg-perl_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bash riscv64 5.3-1 [1560 kB] Fetched 1560 kB in 0s (29.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpta_e10ps/bash_5.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfribidi0 riscv64 1.0.16-3 [27.7 kB] Fetched 27.7 kB in 0s (1362 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdmq6gz18/libfribidi0_1.0.16-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libelf1t64 riscv64 0.193-3 [195 kB] Fetched 195 kB in 0s (3432 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi68rpqi6/libelf1t64_0.193-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxrender1 riscv64 1:0.9.12-1 [28.5 kB] Fetched 28.5 kB in 0s (1402 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpz85ur35i/libxrender1_0.9.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libp11-kit0 riscv64 0.25.9-2 [449 kB] Fetched 449 kB in 0s (7250 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrb_u2ny/libp11-kit0_0.25.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwayland-client0 riscv64 1.24.0-2+b1 [28.5 kB] Fetched 28.5 kB in 0s (1396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6zcm9ki7/libwayland-client0_1.24.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libselinux1 riscv64 3.9-2 [88.5 kB] Fetched 88.5 kB in 0s (1623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rd2h3gl/libselinux1_3.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus-session-bus-common all 1.16.2-2 [52.3 kB] Fetched 52.3 kB in 0s (2510 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7oba63zb/dbus-session-bus-common_1.16.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libonig5 riscv64 6.9.10-1 [191 kB] Fetched 191 kB in 0s (3382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmqvoc2vp/libonig5_6.9.10-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-bin riscv64 3.3.10-2+b1 [44.9 kB] Fetched 44.9 kB in 0s (842 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps0d8h31w/libfftw3-bin_3.3.10-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic-mgc riscv64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (5541 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpcl7iasss/libmagic-mgc_5.46-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 automake all 1:1.18.1-2 [877 kB] Fetched 877 kB in 0s (12.3 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-2_all.deb' to '/srv/rebuilderd/tmp/tmp033vieuw/automake_1.18.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 systemd riscv64 258.1-1 [3162 kB] Fetched 3162 kB in 0s (25.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwkfoauji/systemd_258.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-certifi all 2025.1.31+ds-1 [9652 B] Fetched 9652 B in 0s (183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mh0_ihe/python3-certifi_2025.1.31+ds-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgssapi-krb5-2 riscv64 1.21.3-5 [143 kB] Fetched 143 kB in 0s (2562 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx5n0nwna/libgssapi-krb5-2_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libinput-bin riscv64 1.28.1-1 [26.6 kB] Fetched 26.6 kB in 0s (504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsoio2114/libinput-bin_1.28.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-render0 riscv64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (5161 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3r9lmm_r/libxcb-render0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 perl-base riscv64 5.40.1-6 [1662 kB] Fetched 1662 kB in 0s (19.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_rh99wf/perl-base_5.40.1-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-python all 6.20250414 [116 kB] Fetched 116 kB in 0s (2085 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpph4ds7ti/dh-python_6.20250414_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp-dev riscv64 2:6.3.0+dfsg-5 [1024 kB] Fetched 1024 kB in 0s (12.7 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmppe4u0fiy/libgmp-dev_6.3.0+dfsg-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libinput10 riscv64 1.28.1-1 [143 kB] Fetched 143 kB in 0s (2583 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9y7x9354/libinput10_1.28.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd4c0 riscv64 0.5.2-2+b1 [49.6 kB] Fetched 49.6 kB in 0s (932 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp25zozhhx/libmd4c0_0.5.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libngtcp2-crypto-ossl0 riscv64 1.16.0-1 [27.7 kB] Fetched 27.7 kB in 0s (1369 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6q5y371j/libngtcp2-crypto-ossl0_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-32-0 riscv64 10.46-1 [264 kB] Fetched 264 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyuz4i260/libpcre2-32-0_10.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgtk-3-0t64 riscv64 3.24.51-1 [2933 kB] Fetched 2933 kB in 0s (35.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmvxufi9k/libgtk-3-0t64_3.24.51-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libann-cctbx-dev riscv64 1.1.2+doc-9+b1 [78.6 kB] Fetched 78.6 kB in 1s (85.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphk0ltfck/libann-cctbx-dev_1.1.2+doc-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Fetched 978 kB in 0s (24.0 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmphyf61yza/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libharfbuzz0b riscv64 12.1.0-1 [583 kB] Fetched 583 kB in 0s (18.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj7g8rl0q/libharfbuzz0b_12.1.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus-bin riscv64 1.16.2-2 [78.5 kB] Fetched 78.5 kB in 0s (3685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwvblrpih/dbus-bin_1.16.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhwloc-plugins riscv64 2.12.2-1 [17.8 kB] Fetched 17.8 kB in 0s (338 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxwqqwxa/libhwloc-plugins_2.12.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgbm1 riscv64 25.2.5-1 [48.0 kB] Fetched 48.0 kB in 0s (904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8442rkt/libgbm1_25.2.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-dri3-0 riscv64 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (4792 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqb30fhzo/libxcb-dri3-0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-pint all 0.25-1 [229 kB] Fetched 229 kB in 2s (95.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptvngpw0z/python3-pint_0.25-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libann-cctbx0 riscv64 1.1.2+doc-9+b1 [32.3 kB] Fetched 32.3 kB in 1s (48.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp01lye7vg/libann-cctbx0_1.1.2+doc-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (985 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf9rytwbc/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libatk1.0-0t64 riscv64 2.58.1-1 [52.3 kB] Fetched 52.3 kB in 0s (980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeifk1y14/libatk1.0-0t64_2.58.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus-user-session riscv64 1.16.2-2 [52.1 kB] Fetched 52.1 kB in 0s (2529 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvfrb2kg3/dbus-user-session_1.16.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xkb1 riscv64 1.17.0-2+b1 [130 kB] Fetched 130 kB in 0s (2354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpci72174t/libxcb-xkb1_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-tk riscv64 3.13.9-1 [8688 B] Fetched 8688 B in 0s (166 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmdav_1lg/python3-tk_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuchardet0 riscv64 0.0.8-2 [68.3 kB] Fetched 68.3 kB in 0s (3277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpblnjapjl/libuchardet0_0.0.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gcc-15 riscv64 15.2.0-4 [511 kB] Fetched 511 kB in 0s (8095 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm7uo4gou/gcc-15_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-timer1.83.0 riscv64 1.83.0-5 [235 kB] Fetched 235 kB in 0s (4076 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0p4_18xb/libboost-timer1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdmcp6 riscv64 1:1.1.5-1 [28.0 kB] Fetched 28.0 kB in 0s (1389 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpi23vvpo1/libxdmcp6_1.1.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfreetype6 riscv64 2.13.3+dfsg-1 [467 kB] Fetched 467 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxvzmky7/libfreetype6_2.13.3+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (4327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpomc9crp8/xtrans-dev_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libavahi-common3 riscv64 0.8-17 [44.3 kB] Fetched 44.3 kB in 0s (2135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ri7zhfn/libavahi-common3_0.8-17_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-hl-fortran-310 riscv64 1.14.5+repack-4 [43.7 kB] Fetched 43.7 kB in 0s (823 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcqet7x6p/libhdf5-hl-fortran-310_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwxbase3.2-1t64 riscv64 3.2.8+dfsg-2 [1003 kB] Fetched 1003 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkrd2nrs/libwxbase3.2-1t64_3.2.8+dfsg-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-exec riscv64 0.30 [25.3 kB] Fetched 25.3 kB in 0s (481 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyvs8pd3n/dh-exec_0.30_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5gui5t64 riscv64 5.15.17+dfsg-4 [3300 kB] Fetched 3300 kB in 0s (25.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7k8zrhs8/libqt5gui5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-contourpy riscv64 1.3.1-2 [210 kB] Fetched 210 kB in 0s (3679 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpximq_km6/python3-contourpy_1.3.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic1t64 riscv64 1:5.46-5 [117 kB] Fetched 117 kB in 0s (5287 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp8det4bq0/libmagic1t64_5.46-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtasn1-6 riscv64 4.20.0-2 [50.6 kB] Fetched 50.6 kB in 0s (2428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp23bx06sa/libtasn1-6_4.20.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-wheel all 0.46.1-2 [21.7 kB] Fetched 21.7 kB in 0s (411 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0vpy0o5y/python3-wheel_0.46.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dbus-daemon riscv64 1.16.2-2 [159 kB] Fetched 159 kB in 0s (6852 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprqdzncy9/dbus-daemon_1.16.2-2_riscv64.deb' Downloading dependency 371 of 631: fonts-lato:riscv64=2.015-1 Downloading dependency 372 of 631: ca-certificates:riscv64=20250419 Downloading dependency 373 of 631: libraqm0:riscv64=0.10.3-1 Downloading dependency 374 of 631: libpcre2-8-0:riscv64=10.46-1 Downloading dependency 375 of 631: libgl1:riscv64=1.7.0-1+b2 Downloading dependency 376 of 631: libtasn1-6-dev:riscv64=4.20.0-2 Downloading dependency 377 of 631: x11proto-dev:riscv64=2024.1-1 Downloading dependency 378 of 631: libibverbs1:riscv64=56.1-1+b1 Downloading dependency 379 of 631: libsensors-config:riscv64=1:3.6.2-2 Downloading dependency 380 of 631: libtiff-dev:riscv64=4.7.1-1 Downloading dependency 381 of 631: libsystemd0:riscv64=258.1-1 Downloading dependency 382 of 631: xfonts-encodings:riscv64=1:1.0.4-2.2 Downloading dependency 383 of 631: libcurl4t64:riscv64=8.17.0~rc2-1 Downloading dependency 384 of 631: libxcomposite1:riscv64=1:0.4.6-1 Downloading dependency 385 of 631: libattr1:riscv64=1:2.5.2-3 Downloading dependency 386 of 631: libnl-3-200:riscv64=3.11.0-2 Downloading dependency 387 of 631: g++-15:riscv64=15.2.0-4 Downloading dependency 388 of 631: python3-dateutil:riscv64=2.9.0-4 Downloading dependency 389 of 631: python3-cycler:riscv64=0.12.1-2 Downloading dependency 390 of 631: libpam-runtime:riscv64=1.7.0-5 Downloading dependency 391 of 631: libglu1-mesa:riscv64=9.0.2-1.1+b3 Downloading dependency 392 of 631: architecture-properties:riscv64=0.2.6 Downloading dependency 393 of 631: shared-mime-info:riscv64=2.4-5+b3 Downloading dependency 394 of 631: libxcb-icccm4:riscv64=0.4.2-1 Downloading dependency 395 of 631: libhdf5-fortran-310:riscv64=1.14.5+repack-4 Downloading dependency 396 of 631: libhwloc15:riscv64=2.12.2-1 Downloading dependency 397 of 631: libbsd0:riscv64=0.12.2-2 Downloading dependency 398 of 631: libibmad5:riscv64=56.1-1+b1 Downloading dependency 399 of 631: libgnutls28-dev:riscv64=3.8.10-2 Downloading dependency 400 of 631: libwebp7:riscv64=1.5.0-0.1 Downloading dependency 401 of 631: g++:riscv64=4:15.2.0-4 Downloading dependency 402 of 631: libx11-xcb1:riscv64=2:1.8.12-1 Downloading dependency 403 of 631: mawk:riscv64=1.3.4.20250131-1 Downloading dependency 404 of 631: coreutils:riscv64=9.7-3 Downloading dependency 405 of 631: libqhull-r8.0:riscv64=2020.2-7 Downloading dependency 406 of 631: login.defs:riscv64=1:4.18.0-2 Downloading dependency 407 of 631: dwz:riscv64=0.16-2 Downloading dependency 408 of 631: libgssrpc4t64:riscv64=1.21.3-5 Downloading dependency 409 of 631: libqt5network5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 410 of 631: python3-idna:riscv64=3.10-1 Downloading dependency 411 of 631: python3-minimal:riscv64=3.13.7-1 Downloading dependency 412 of 631: python3-scipy:riscv64=1.16.2-3 Downloading dependency 413 of 631: libxcb1-dev:riscv64=1.17.0-2+b1 Downloading dependency 414 of 631: libsqlite3-0:riscv64=3.46.1-8 Downloading dependency 415 of 631: libnghttp3-9:riscv64=1.12.0-1 Downloading dependency 416 of 631: cpp-15-riscv64-linux-gnu:riscv64=15.2.0-4 Downloading dependency 417 of 631: libegl-mesa0:riscv64=25.2.5-1 Downloading dependency 418 of 631: libevent-pthreads-2.1-7t64:riscv64=2.1.12-stable-10+b1 Downloading dependency 419 of 631: sed:riscv64=4.9-2 Downloading dependency 420 of 631: libc-dev-bin:riscv64=2.41-12 Downloading dependency 421 of 631: python3-chardet:riscv64=5.2.0+dfsg-2 Downloading dependency 422 of 631: libkrb5support0:riscv64=1.21.3-5 Downloading dependency 423 of 631: g++-riscv64-linux-gnu:riscv64=4:15.2.0-4 Downloading dependency 424 of 631: libgnutls-dane0t64:riscv64=3.8.10-2 Downloading dependency 425 of 631: libzstd1:riscv64=1.5.7+dfsg-2 Downloading dependency 426 of 631: libboost-timer-dev:riscv64=1.83.0.2+b2 Downloading dependency 427 of 631: python3.13-minimal:riscv64=3.13.9-1 Downloading dependency 428 of 631: libgl-dev:riscv64=1.7.0-1+b2 Downloading dependency 429 of 631: g++-15-riscv64-linux-gnu:riscv64=15.2.0-4 Downloading dependency 430 of 631: libtiff6:riscv64=4.7.1-1 Downloading dependency 431 of 631: libtinfo6:riscv64=6.5+20250216-2 Downloading dependency 432 of 631: libpng16-16t64:riscv64=1.6.50-1 Downloading dependency 433 of 631: libwebp-dev:riscv64=1.5.0-0.1 Downloading dependency 434 of 631: python3-reportlab:riscv64=4.4.4-2 Downloading dependency 435 of 631: libllvm19:riscv64=1:19.1.7-7 Downloading dependency 436 of 631: libsharpyuv0:riscv64=1.5.0-0.1 Downloading dependency 437 of 631: libdpkg-perl:riscv64=1.22.21 Downloading dependency 438 of 631: bash:riscv64=5.3-1 Downloading dependency 439 of 631: libfribidi0:riscv64=1.0.16-3 Downloading dependency 440 of 631: libelf1t64:riscv64=0.193-3 Downloading dependency 441 of 631: libxrender1:riscv64=1:0.9.12-1 Downloading dependency 442 of 631: libp11-kit0:riscv64=0.25.9-2 Downloading dependency 443 of 631: libwayland-client0:riscv64=1.24.0-2+b1 Downloading dependency 444 of 631: libselinux1:riscv64=3.9-2 Downloading dependency 445 of 631: dbus-session-bus-common:riscv64=1.16.2-2 Downloading dependency 446 of 631: libonig5:riscv64=6.9.10-1 Downloading dependency 447 of 631: libfftw3-bin:riscv64=3.3.10-2+b1 Downloading dependency 448 of 631: libmagic-mgc:riscv64=1:5.46-5 Downloading dependency 449 of 631: automake:riscv64=1:1.18.1-2 Downloading dependency 450 of 631: systemd:riscv64=258.1-1 Downloading dependency 451 of 631: python3-certifi:riscv64=2025.1.31+ds-1 Downloading dependency 452 of 631: libgssapi-krb5-2:riscv64=1.21.3-5 Downloading dependency 453 of 631: libinput-bin:riscv64=1.28.1-1 Downloading dependency 454 of 631: libxcb-render0:riscv64=1.17.0-2+b1 Downloading dependency 455 of 631: perl-base:riscv64=5.40.1-6 Downloading dependency 456 of 631: dh-python:riscv64=6.20250414 Downloading dependency 457 of 631: libgmp-dev:riscv64=2:6.3.0+dfsg-5 Downloading dependency 458 of 631: libinput10:riscv64=1.28.1-1 Downloading dependency 459 of 631: libmd4c0:riscv64=0.5.2-2+b1 Downloading dependency 460 of 631: libngtcp2-crypto-ossl0:riscv64=1.16.0-1 Downloading dependency 461 of 631: libpcre2-32-0:riscv64=10.46-1 Downloading dependency 462 of 631: libgtk-3-0t64:riscv64=3.24.51-1 Downloading dependency 463 of 631: libann-cctbx-dev:riscv64=1.1.2+doc-9+b1 Downloading dependency 464 of 631: zlib1g-dev:riscv64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 465 of 631: libharfbuzz0b:riscv64=12.1.0-1 Downloading dependency 466 of 631: dbus-bin:riscv64=1.16.2-2 Downloading dependency 467 of 631: libhwloc-plugins:riscv64=2.12.2-1 Downloading dependency 468 of 631: libgbm1:riscv64=25.2.5-1 Downloading dependency 469 of 631: libxcb-dri3-0:riscv64=1.17.0-2+b1 Downloading dependency 470 of 631: python3-pint:riscv64=0.25-1 Downloading dependency 471 of 631: libann-cctbx0:riscv64=1.1.2+doc-9+b1 Downloading dependency 472 of 631: libfile-stripnondeterminism-perl:riscv64=1.15.0-1 Downloading dependency 473 of 631: libatk1.0-0t64:riscv64=2.58.1-1 Downloading dependency 474 of 631: dbus-user-session:riscv64=1.16.2-2 Downloading dependency 475 of 631: libxcb-xkb1:riscv64=1.17.0-2+b1 Downloading dependency 476 of 631: python3-tk:riscv64=3.13.9-1 Downloading dependency 477 of 631: libuchardet0:riscv64=0.0.8-2 Downloading dependency 478 of 631: gcc-15:riscv64=15.2.0-4 Downloading dependency 479 of 631: libboost-timer1.83.0:riscv64=1.83.0-5 Downloading dependency 480 of 631: libxdmcp6:riscv64=1:1.1.5-1 Downloading dependency 481 of 631: libfreetype6:riscv64=2.13.3+dfsg-1 Downloading dependency 482 of 631: xtrans-dev:riscv64=1.6.0-1 Downloading dependency 483 of 631: libavahi-common3:riscv64=0.8-17 Downloading dependency 484 of 631: libhdf5-hl-fortran-310:riscv64=1.14.5+repack-4 Downloading dependency 485 of 631: libwxbase3.2-1t64:riscv64=3.2.8+dfsg-2 Downloading dependency 486 of 631: dh-exec:riscv64=0.30 Downloading dependency 487 of 631: libqt5gui5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 488 of 631: python3-contourpy:riscv64=1.3.1-2 Downloading dependency 489 of 631: libmagic1t64:riscv64=1:5.46-5 Downloading dependency 490 of 631: libtasn1-6:riscv64=4.20.0-2 Downloading dependency 491 of 631: python3-wheel:riscv64=0.46.1-2 Downloading dependency 492 of 631: dbus-daemon:riscv64=1.16.2-2 Downloading dependency 493 of 631: python-matplotlib-data:riscv64=3.10.7+dfsg1-1Get:1 http://deb.debian.org/debian unstable/main riscv64 python-matplotlib-data all 3.10.7+dfsg1-1 [2737 kB] Fetched 2737 kB in 0s (23.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wrfxk51/python-matplotlib-data_3.10.7+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (206 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhm7izdt/python3-zipp_3.23.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libp11-kit-dev riscv64 0.25.9-2 [220 kB] Fetched 220 kB in 0s (3858 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvex6buui/libp11-kit-dev_0.25.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gettext riscv64 0.23.1-2+b1 [1682 kB] Fetched 1682 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxeng2qsk/gettext_0.23.1-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libhdf5-dev riscv64 1.14.5+repack-4 [7317 kB] Fetched 7317 kB in 1s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kw_fhqv/libhdf5-dev_1.14.5+repack-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpc3 riscv64 1.3.1-2 [56.4 kB] Fetched 56.4 kB in 0s (2668 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6rxqw69x/libmpc3_1.3.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblas3 riscv64 3.12.1-7 [123 kB] Fetched 123 kB in 0s (1937 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi52q11h3/libblas3_3.12.1-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB] Fetched 106 kB in 0s (1935 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmppzm57c_j/libcrypt1_4.4.38-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5core5t64 riscv64 5.15.17+dfsg-4 [1941 kB] Fetched 1941 kB in 0s (20.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppd91vvcg/libqt5core5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssh2-1t64 riscv64 1.11.1-1 [249 kB] Fetched 249 kB in 0s (9860 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp64n33d0t/libssh2-1t64_1.11.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 mesa-libgallium riscv64 25.2.5-1 [9635 kB] Fetched 9635 kB in 1s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8xlqf7ch/mesa-libgallium_25.2.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libice6 riscv64 2:1.1.1-1 [64.8 kB] Fetched 64.8 kB in 0s (1197 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpyy7ct864/libice6_1.1.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-biopython riscv64 1.85+dfsg-5 [1671 kB] Fetched 1671 kB in 0s (19.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx76f4jwf/python3-biopython_1.85+dfsg-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc riscv64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (256 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpm79vark0/gcc_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Fetched 517 kB in 0s (8168 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpegly578u/fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcap-ng0 riscv64 0.8.5-4+b1 [17.2 kB] Fetched 17.2 kB in 0s (850 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyoexgu1r/libcap-ng0_0.8.5-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgl1-mesa-dri riscv64 25.2.5-1 [45.6 kB] Fetched 45.6 kB in 0s (856 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkey9me3/libgl1-mesa-dri_25.2.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 make riscv64 4.4.1-2 [463 kB] Fetched 463 kB in 0s (7446 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0qoizjau/make_4.4.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libepoxy0 riscv64 1.5.10-2 [185 kB] Fetched 185 kB in 0s (7744 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6hqa401k/libepoxy0_1.5.10-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfabric1 riscv64 2.1.0-1.1 [601 kB] Fetched 601 kB in 0s (9070 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0h5_0_94/libfabric1_2.1.0-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Fetched 27.6 kB in 0s (522 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8stmhuwu/libjs-sphinxdoc_8.2.3-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libxkbcommon0 riscv64 1.7.0-2.1 [112 kB] Fetched 112 kB in 0s (2035 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo72cks0l/libxkbcommon0_1.7.0-2.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fontconfig riscv64 2.15.0-2.4 [462 kB] Fetched 462 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpno7krwuq/fontconfig_2.15.0-2.4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-dev riscv64 1.83.0.2+b2 [3832 B] Fetched 3832 B in 0s (73.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumbaxxpt/libboost-dev_1.83.0.2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-numpy-dev riscv64 1:2.3.3+ds-3 [185 kB] Fetched 185 kB in 0s (3269 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.3+ds-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpglyfh67q/python3-numpy-dev_2.3.3+ds-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqt5xml5t64 riscv64 5.15.17+dfsg-4 [130 kB] Fetched 130 kB in 0s (2333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9w0u6q1/libqt5xml5t64_5.15.17+dfsg-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 liblcms2-2 riscv64 2.16-2 [169 kB] Fetched 169 kB in 0s (3013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpov0y7agi/liblcms2-2_2.16-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libwebpdecoder3 riscv64 1.5.0-0.1 [186 kB] Fetched 186 kB in 0s (7791 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj0mhh94x/libwebpdecoder3_1.5.0-0.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-dev riscv64 3.13.9-1 [16.7 MB] Fetched 16.7 MB in 1s (20.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxyomrqco/libpython3.13-dev_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblapack3 riscv64 3.12.1-7 [1971 kB] Fetched 1971 kB in 0s (31.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1kbgxq72/liblapack3_3.12.1-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libcolord2 riscv64 1.4.8-1 [140 kB] Fetched 140 kB in 0s (2124 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgtclgcgn/libcolord2_1.4.8-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 binutils riscv64 2.45-7 [268 kB] Fetched 268 kB in 0s (4632 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqnwpnavn/binutils_2.45-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuuid1 riscv64 2.41.2-4 [40.0 kB] Fetched 40.0 kB in 0s (1939 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1rj89dpb/libuuid1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsensors5 riscv64 1:3.6.2-2 [36.9 kB] Fetched 36.9 kB in 0s (689 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmprqe9_m9j/libsensors5_3.6.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libxxf86vm1 riscv64 1:1.1.4-1+b4 [19.8 kB] Fetched 19.8 kB in 0s (376 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmppk82s4n5/libxxf86vm1_1.1.4-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libsystemd-shared riscv64 258.1-1 [2220 kB] Fetched 2220 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6jlq06jf/libsystemd-shared_258.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsm6 riscv64 2:1.2.6-1 [37.3 kB] Fetched 37.3 kB in 0s (1828 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpi7krs0my/libsm6_1.2.6-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librdmacm1t64 riscv64 56.1-1+b1 [72.7 kB] Fetched 72.7 kB in 0s (1344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplw_tyus6/librdmacm1t64_56.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-h5py-serial riscv64 3.14.0-3 [1099 kB] Fetched 1099 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpirc4_go9/python3-h5py-serial_3.14.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-shm0 riscv64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (4793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjybesf7l/libxcb-shm0_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 mount riscv64 2.41.2-4 [168 kB] Fetched 168 kB in 0s (7069 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu25xfte2/mount_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libidn2-0 riscv64 2.3.8-4 [110 kB] Fetched 110 kB in 0s (4743 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5hptnf75/libidn2-0_2.3.8-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libidn2-dev riscv64 2.3.8-4 [135 kB] Fetched 135 kB in 0s (2434 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp480vl1i7/libidn2-dev_2.3.8-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libctf0 riscv64 2.45-7 [96.1 kB] Fetched 96.1 kB in 0s (1762 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj498dqc5/libctf0_2.45-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 base-passwd riscv64 3.6.7 [53.8 kB] Fetched 53.8 kB in 0s (1006 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp95r5243s/base-passwd_3.6.7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bzip2 riscv64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (1943 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt__zah3k/bzip2_1.0.8-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 build-essential riscv64 12.12 [4628 B] Fetched 4628 B in 0s (237 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprp2_i9ox/build-essential_12.12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (1883 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0mcsz5c6/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpfr6 riscv64 4.2.2-2 [664 kB] Fetched 664 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpocnmsqo_/libmpfr6_4.2.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-thread-dev riscv64 1.83.0.2+b2 [3608 B] Fetched 3608 B in 0s (69.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpntatxfsq/libboost-thread-dev_1.83.0.2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-pip all 25.2+dfsg-1 [1386 kB] Fetched 1386 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9gznrds/python3-pip_25.2+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251028T025150Z sid/main riscv64 libunbound8 riscv64 1.24.1-1 [616 kB] Fetched 616 kB in 0s (9368 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8wuhqpso/libunbound8_1.24.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxinerama1 riscv64 2:1.1.4-3+b4 [16.0 kB] Fetched 16.0 kB in 0s (789 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpno39jc7n/libxinerama1_1.1.4-3+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 patch riscv64 2.8-2 [134 kB] Fetched 134 kB in 0s (5832 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxv0xhv8/patch_2.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtool all 2.5.4-7 [540 kB] Fetched 540 kB in 0s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40zktwo4/libtool_2.5.4-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcap2 riscv64 1:2.75-10+b1 [29.3 kB] Fetched 29.3 kB in 0s (1451 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpizqtpb08/libcap2_2.75-10+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13 riscv64 3.13.9-1 [764 kB] Fetched 764 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzn1renya/python3.13_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libeigen3-dev all 3.4.0-5 [1034 kB] Fetched 1034 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9erqbjl/libeigen3-dev_3.4.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-double3 riscv64 3.3.10-2+b1 [378 kB] Fetched 378 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpum62xr11/libfftw3-double3_3.3.10-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sfftw2 riscv64 2.1.5-7+b1 [212 kB] Fetched 212 kB in 0s (3697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsz2bs56t/sfftw2_2.1.5-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-chrono1.83.0t64 riscv64 1.83.0-5 [240 kB] Fetched 240 kB in 0s (4174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_o4gkm6d/libboost-chrono1.83.0t64_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6 riscv64 2.41-12 [2472 kB] Fetched 2472 kB in 0s (34.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_p7vfym/libc6_2.41-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-flexcache all 0.3-2 [13.5 kB] Fetched 13.5 kB in 0s (31.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpglatsifb/python3-flexcache_0.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd-dev riscv64 1.5.7+dfsg-2 [1618 kB] Fetched 1618 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3h9ts36/libzstd-dev_1.5.7+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-six all 1.17.0-1 [16.5 kB] Fetched 16.5 kB in 0s (314 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd44_qzf9/python3-six_1.17.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaec0 riscv64 1.1.4-2 [24.1 kB] Fetched 24.1 kB in 0s (459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbc_l06jr/libaec0_1.1.4-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libevdev2 riscv64 1.13.4+dfsg-1 [29.6 kB] Fetched 29.6 kB in 0s (561 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfp9qwi36/libevdev2_1.13.4+dfsg-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pycbf riscv64 0.9.7+dfsg1-5.1 [167 kB] Fetched 167 kB in 1s (158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl6tb5wd5/python3-pycbf_0.9.7+dfsg1-5.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gcc-15-riscv64-linux-gnu riscv64 15.2.0-4 [119 MB] Fetched 119 MB in 3s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq68eqx6v/gcc-15-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-numpy1.83.0 riscv64 1.83.0-5 [241 kB] Fetched 241 kB in 1s (199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxd39bl5/libboost-numpy1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1131 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0o732pr9/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libacl1 riscv64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (1599 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx5z94q3g/libacl1_2.3.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblerc-dev riscv64 4.0.0+ds-5 [724 kB] Fetched 724 kB in 0s (20.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldmmppfj/liblerc-dev_4.0.0+ds-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 dconf-gsettings-backend riscv64 0.49.0-1 [29.2 kB] Fetched 29.2 kB in 0s (553 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpho97fet3/dconf-gsettings-backend_0.49.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmmdb2-0 riscv64 2.0.22-1+b2 [346 kB] Fetched 346 kB in 0s (9310 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5560sbdh/libmmdb2-0_2.0.22-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 blt riscv64 2.5.3+dfsg-8 [5984 B] Fetched 5984 B in 0s (113 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyjf_euh4/blt_2.5.3+dfsg-8_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 liblz4-1 riscv64 1.10.0-4 [85.8 kB] Fetched 85.8 kB in 0s (1574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbywpkraa/liblz4-1_1.10.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ocl-icd-libopencl1 riscv64 2.3.4-1 [42.3 kB] Fetched 42.3 kB in 0s (1988 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwr2gmr93/ocl-icd-libopencl1_2.3.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-dev riscv64 3.13.9-1 [508 kB] Fetched 508 kB in 0s (8058 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw1sgb5nz/python3.13-dev_3.13.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvg7qjrj_/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libglx-mesa0 riscv64 25.2.5-1 [126 kB] Fetched 126 kB in 0s (2288 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1306xb_8/libglx-mesa0_25.2.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libglut3.12 riscv64 3.4.0-6 [136 kB] Fetched 136 kB in 0s (2446 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdahtcvxi/libglut3.12_3.4.0-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjpeg62-turbo riscv64 1:2.1.5-4 [155 kB] Fetched 155 kB in 0s (6659 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpge0p7qas/libjpeg62-turbo_2.1.5-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxau6 riscv64 1:1.0.11-1 [20.5 kB] Fetched 20.5 kB in 0s (1017 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmppwk_5zr_/libxau6_1.0.11-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6-dev riscv64 2.41-12 [3127 kB] Fetched 3127 kB in 0s (25.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvg4pemaj/libc6-dev_2.41-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdbus-1-3 riscv64 1.16.2-2 [181 kB] Fetched 181 kB in 0s (7668 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdvtkjlf/libdbus-1-3_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgnutls-openssl27t64 riscv64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (7349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkf95o4sq/libgnutls-openssl27t64_3.8.10-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rsync riscv64 3.4.1+ds1-6 [430 kB] Fetched 430 kB in 0s (6954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo6dh9mxp/rsync_3.4.1+ds1-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgraphite2-3 riscv64 1.3.14-11 [79.1 kB] Fetched 79.1 kB in 0s (3737 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ao2406t/libgraphite2-3_1.3.14-11_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-10 [719 kB] Fetched 719 kB in 0s (20.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsqk_y17y/libdb5.3t64_5.3.28+dfsg2-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpangoft2-1.0-0 riscv64 1.56.3-2 [56.2 kB] Fetched 56.2 kB in 0s (2682 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxw17g4g9/libpangoft2-1.0-0_1.56.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-long3 riscv64 3.3.10-2+b1 [705 kB] Fetched 705 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp__auhrck/libfftw3-long3_3.3.10-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-timer1.83-dev riscv64 1.83.0-5 [249 kB] Fetched 249 kB in 0s (4304 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps5a_rsnu/libboost-timer1.83-dev_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (8887 kB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmppkpvtzmy/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-sync1 riscv64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (4912 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptj4d7pyr/libxcb-sync1_1.17.0-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcursor1 riscv64 1:1.2.3-1 [40.2 kB] Fetched 40.2 kB in 0s (1950 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp0hfah092/libxcursor1_1.2.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bsdextrautils riscv64 2.41.2-4 [102 kB] Fetched 102 kB in 0s (4685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqrv3c8a0/bsdextrautils_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-lxml riscv64 6.0.2-1 [1430 kB] Fetched 1430 kB in 0s (28.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqtbyebk7/python3-lxml_6.0.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dash riscv64 0.5.12-12 [101 kB] Fetched 101 kB in 0s (4614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu7b03zj7/dash_0.5.12-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-cairo riscv64 1.27.0-2 [114 kB] Fetched 114 kB in 0s (2081 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeev48o97/python3-cairo_1.27.0-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcairo-gobject2 riscv64 1.18.4-1+b1 [130 kB] Fetched 130 kB in 0s (5728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vf6kej2/libcairo-gobject2_1.18.4-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 util-linux riscv64 2.41.2-4 [1158 kB] Fetched 1158 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzdyhl1kf/util-linux_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfftw3-single3 riscv64 3.3.10-2+b1 [381 kB] Fetched 381 kB in 0s (6300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpru5zkk_v/libfftw3-single3_3.3.10-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 fftw-dev riscv64 2.1.5-7+b1 [298 kB] Fetched 298 kB in 0s (5021 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg8mn5yvm/fftw-dev_2.1.5-7+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 sysvinit-utils riscv64 3.15-5 [34.5 kB] Fetched 34.5 kB in 0s (651 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59tvydx7/sysvinit-utils_3.15-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libngtcp2-dev riscv64 1.16.0-1 [452 kB] Fetched 452 kB in 0s (7305 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe8ku66fl/libngtcp2-dev_1.16.0-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-xfixes0 riscv64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (4939 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp091zni0x/libxcb-xfixes0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gcc-15-base riscv64 15.2.0-4 [52.8 kB] Fetched 52.8 kB in 0s (989 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp41amlvon/gcc-15-base_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-3 [58.7 kB] Fetched 58.7 kB in 0s (2804 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8_42_a7p/librtmp1_2.4+20151223.gitfa8646d.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libx11-dev riscv64 2:1.8.12-1 [1408 kB] Fetched 1408 kB in 0s (28.4 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmd7nl921/libx11-dev_1.8.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsemanage2 riscv64 3.9-1 [94.5 kB] Fetched 94.5 kB in 0s (1742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpghrq2whc/libsemanage2_3.9-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyqt5 riscv64 5.15.11+dfsg-3 [2523 kB] Fetched 2523 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpol5fnhzx/python3-pyqt5_5.15.11+dfsg-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxft2 riscv64 2.3.6-1+b4 [53.1 kB] Fetched 53.1 kB in 0s (2509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuwj7t09m/libxft2_2.3.6-1+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-5 [558 kB] Fetched 558 kB in 0s (17.5 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp64k2y_0m/libgmp10_6.3.0+dfsg-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libxslt1.1 riscv64 1.1.43-0.2 [158 kB] Fetched 158 kB in 0s (2829 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj7zk0z5e/libxslt1.1_1.1.43-0.2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 python3-zopfli riscv64 0.2.3.post1-1 [9892 B] Fetched 9892 B in 0s (189 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1193150t/python3-zopfli_0.2.3.post1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-thread1.83.0 riscv64 1.83.0-5 [268 kB] Fetched 268 kB in 0s (4614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp52rxugn/libboost-thread1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-freetype all 2.5.1-2 [89.4 kB] Fetched 89.4 kB in 0s (1644 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjck_t6q8/python3-freetype_2.5.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libkadm5clnt-mit12 riscv64 1.21.3-5 [42.2 kB] Fetched 42.2 kB in 0s (794 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp92qafx2j/libkadm5clnt-mit12_1.21.3-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-flexparser all 0.4-1 [42.9 kB] Fetched 42.9 kB in 1s (66.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpya20q_mj/python3-flexparser_0.4-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 liblsan0 riscv64 15.2.0-4 [1326 kB] Fetched 1326 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_o4u1wt/liblsan0_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpixman-1-0 riscv64 0.46.4-1 [178 kB] Fetched 178 kB in 0s (7598 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapa8jucm/libpixman-1-0_0.46.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxdmcp-dev riscv64 1:1.1.5-1 [52.9 kB] Fetched 52.9 kB in 0s (2544 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1l75nbuq/libxdmcp-dev_1.1.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcbf-dev riscv64 0.9.7+dfsg1-5.1 [1306 kB] Fetched 1306 kB in 2s (788 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3mcx6cpk/libcbf-dev_0.9.7+dfsg1-5.1_riscv64.deb' Downloading dependency 494 of 631: python3-zipp:riscv64=3.23.0-1 Downloading dependency 495 of 631: libp11-kit-dev:riscv64=0.25.9-2 Downloading dependency 496 of 631: gettext:riscv64=0.23.1-2+b1 Downloading dependency 497 of 631: libhdf5-dev:riscv64=1.14.5+repack-4 Downloading dependency 498 of 631: libmpc3:riscv64=1.3.1-2 Downloading dependency 499 of 631: libblas3:riscv64=3.12.1-7 Downloading dependency 500 of 631: libcrypt1:riscv64=1:4.4.38-1 Downloading dependency 501 of 631: libqt5core5t64:riscv64=5.15.17+dfsg-4 Downloading dependency 502 of 631: libssh2-1t64:riscv64=1.11.1-1 Downloading dependency 503 of 631: 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of 631: libgnutls-openssl27t64:riscv64=3.8.10-2 Downloading dependency 580 of 631: rsync:riscv64=3.4.1+ds1-6 Downloading dependency 581 of 631: libgraphite2-3:riscv64=1.3.14-11 Downloading dependency 582 of 631: libdb5.3t64:riscv64=5.3.28+dfsg2-10 Downloading dependency 583 of 631: libpangoft2-1.0-0:riscv64=1.56.3-2 Downloading dependency 584 of 631: libfftw3-long3:riscv64=3.3.10-2+b1 Downloading dependency 585 of 631: libboost-timer1.83-dev:riscv64=1.83.0-5 Downloading dependency 586 of 631: x11-common:riscv64=1:7.7+26 Downloading dependency 587 of 631: libxcb-sync1:riscv64=1.17.0-2+b1 Downloading dependency 588 of 631: libxcursor1:riscv64=1:1.2.3-1 Downloading dependency 589 of 631: bsdextrautils:riscv64=2.41.2-4 Downloading dependency 590 of 631: python3-lxml:riscv64=6.0.2-1 Downloading dependency 591 of 631: dash:riscv64=0.5.12-12 Downloading dependency 592 of 631: python3-cairo:riscv64=1.27.0-2 Downloading dependency 593 of 631: libcairo-gobject2:riscv64=1.18.4-1+b1 Downloading dependency 594 of 631: util-linux:riscv64=2.41.2-4 Downloading dependency 595 of 631: libfftw3-single3:riscv64=3.3.10-2+b1 Downloading dependency 596 of 631: fftw-dev:riscv64=2.1.5-7+b1 Downloading dependency 597 of 631: sysvinit-utils:riscv64=3.15-5 Downloading dependency 598 of 631: libngtcp2-dev:riscv64=1.16.0-1 Downloading dependency 599 of 631: libxcb-xfixes0:riscv64=1.17.0-2+b1 Downloading dependency 600 of 631: gcc-15-base:riscv64=15.2.0-4 Downloading dependency 601 of 631: librtmp1:riscv64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 602 of 631: libx11-dev:riscv64=2:1.8.12-1 Downloading dependency 603 of 631: libsemanage2:riscv64=3.9-1 Downloading dependency 604 of 631: python3-pyqt5:riscv64=5.15.11+dfsg-3 Downloading dependency 605 of 631: libxft2:riscv64=2.3.6-1+b4 Downloading dependency 606 of 631: libgmp10:riscv64=2:6.3.0+dfsg-5 Downloading dependency 607 of 631: libxslt1.1:riscv64=1.1.43-0.2 Downloading dependency 608 of 631: python3-zopfli:riscv64=0.2.3.post1-1 Downloading dependency 609 of 631: libboost-thread1.83.0:riscv64=1.83.0-5 Downloading dependency 610 of 631: python3-freetype:riscv64=2.5.1-2 Downloading dependency 611 of 631: libkadm5clnt-mit12:riscv64=1.21.3-5 Downloading dependency 612 of 631: python3-flexparser:riscv64=0.4-1 Downloading dependency 613 of 631: liblsan0:riscv64=15.2.0-4 Downloading dependency 614 of 631: libpixman-1-0:riscv64=0.46.4-1 Downloading dependency 615 of 631: libxdmcp-dev:riscv64=1:1.1.5-1 Downloading dependency 616 of 631: libcbf-dev:riscv64=0.9.7+dfsg1-5.1 Downloading dependency 617 of 631: libxcb-image0:riscv64=0.4.0-2+b2Get:1 http://deb.debian.org/debian unstable/main riscv64 libxcb-image0 riscv64 0.4.0-2+b2 [22.2 kB] Fetched 22.2 kB in 0s (414 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp8s_68ew/libxcb-image0_0.4.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3 riscv64 3.13.7-1 [28.3 kB] Fetched 28.3 kB in 0s (1397 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpew_u9g30/python3_3.13.7-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdk-pixbuf2.0-common all 2.44.4+dfsg-1 [313 kB] Fetched 313 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7lqq0_i4/libgdk-pixbuf2.0-common_2.44.4+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjq1 riscv64 1.8.1-4 [166 kB] Fetched 166 kB in 0s (2959 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5nafygtg/libjq1_1.8.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcom-err2 riscv64 1.47.2-3+b3 [24.7 kB] Fetched 24.7 kB in 0s (1228 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpen8m1m56/libcom-err2_1.47.2-3+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libboost-python1.83.0 riscv64 1.83.0-5 [302 kB] Fetched 302 kB in 0s (5141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ksi8_zx/libboost-python1.83.0_1.83.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpkgconf3 riscv64 1.8.1-4 [36.0 kB] Fetched 36.0 kB in 0s (1777 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi78hn985/libpkgconf3_1.8.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hostname riscv64 3.25 [10.7 kB] Fetched 10.7 kB in 0s (542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiayl1rw5/hostname_3.25_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libnetcdf22 riscv64 1:4.9.3-1+b1 [520 kB] Fetched 520 kB in 0s (8195 kB/s) dpkg-name: info: moved 'libnetcdf22_1%3a4.9.3-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmppkxnotgc/libnetcdf22_4.9.3-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcbf1t64 riscv64 0.9.7+dfsg1-5.1 [357 kB] Fetched 357 kB in 1s (254 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyk2derev/libcbf1t64_0.9.7+dfsg1-5.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libgcc-15-dev riscv64 15.2.0-4 [5686 kB] Fetched 5686 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4_by099b/libgcc-15-dev_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libperl5.40 riscv64 5.40.1-6 [3945 kB] Fetched 3945 kB in 0s (27.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7w4qvczd/libperl5.40_5.40.1-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 libqt5designer5 riscv64 5.15.17-3 [2782 kB] Fetched 2782 kB in 0s (23.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv61bl2wu/libqt5designer5_5.15.17-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpciaccess0 riscv64 0.17-3+b3 [51.6 kB] Fetched 51.6 kB in 0s (2503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp62wwk9s1/libpciaccess0_0.17-3+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main riscv64 gtk-update-icon-cache riscv64 4.20.2+ds-1 [53.2 kB] Fetched 53.2 kB in 0s (987 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wadirp8/gtk-update-icon-cache_4.20.2+ds-1_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpc260_pf9/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW 127.0.0.1 - - [24/Nov/2025 18:47:22] code 404, message File not found 127.0.0.1 - - [24/Nov/2025 18:47:22] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45061 ./ InRelease 127.0.0.1 - - [24/Nov/2025 18:47:22] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:45061 ./ Release [462 B] 127.0.0.1 - - [24/Nov/2025 18:47:22] code 404, message File not found 127.0.0.1 - - [24/Nov/2025 18:47:22] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45061 ./ Release.gpg 127.0.0.1 - - [24/Nov/2025 18:47:22] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:45061 ./ Packages [800 kB] Fetched 801 kB in 0s (12.3 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./gcc-15-base_15.2.0-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libc6_2.41-12_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libgcc-s1_15.2.0-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./mawk_1.3.4.20250131-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./base-files_14_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libtinfo6_6.5%2b20250216-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./debianutils_5.23.2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./bash_5.3-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libacl1_2.3.2-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libattr1_2.5.2-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libcap2_2.75-10%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - 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- [24/Nov/2025 18:47:23] "GET /./perl-base_5.40.1-6_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./sed_4.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libcap-ng0_0.8.5-4%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libaudit1_4.1.2-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libdb5.3t64_5.3.28%2bdfsg2-10_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libpam0g_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libpam-modules-bin_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libpam-modules_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libblkid1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libmount1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libsmartcols1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libudev1_258.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libuuid1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./util-linux_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libdebconfclient0_0.280_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./base-passwd_3.6.7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./libc-bin_2.41-12_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:23] "GET /./sysvinit-utils_3.15-5_riscv64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW 127.0.0.1 - - [24/Nov/2025 18:47:27] code 404, message File not found 127.0.0.1 - - [24/Nov/2025 18:47:27] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45061 ./ InRelease 127.0.0.1 - - [24/Nov/2025 18:47:27] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:45061 ./ Release 127.0.0.1 - - [24/Nov/2025 18:47:27] code 404, message File not found 127.0.0.1 - - [24/Nov/2025 18:47:27] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45061 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./mount_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./libseccomp2_2.6.0-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./libsystemd-shared_258.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./systemd_258.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./systemd-sysv_258.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./libdbus-1-3_1.16.2-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./dbus-bin_1.16.2-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:47:45] "GET /./dbus-session-bus-common_1.16.2-2_all.deb HTTP/1.1" 200 - 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127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./libboost-dev_1.83.0.2%2bb2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./libboost-thread-dev_1.83.0.2%2bb2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./python3-pip_25.2%2bdfsg-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./libeigen3-dev_3.4.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./python3-six_1.17.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./libcbf1t64_0.9.7%2bdfsg1-5.1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./python3-pycbf_0.9.7%2bdfsg1-5.1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./libcbf-dev_0.9.7%2bdfsg1-5.1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [24/Nov/2025 18:48:29] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpc260_pf9/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW Reading package lists... Building dependency tree... Reading state information... libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libblkid1 is already the newest version (2.41.2-4). comerr-dev is already the newest version (2.1-1.47.2-3+b3). comerr-dev set to manually installed. python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. python3-brotli is already the newest version (1.1.0-2+b7). python3-brotli set to manually installed. libxi6 is already the newest version (2:1.8.2-1). libxi6 set to manually installed. libcups2t64 is already the newest version (2.4.14-1). libcups2t64 set to manually installed. libevent-core-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-core-2.1-7t64 set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. systemd-sysv is already the newest version (258.1-1). systemd-sysv set to manually installed. libboost1.83-dev is already the newest version (1.83.0-5). libboost1.83-dev set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b1). libxcb-xinput0 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libibumad3 is already the newest version (56.1-1+b1). libibumad3 set to manually installed. python3-h5py is already the newest version (3.14.0-3). python3-h5py set to manually installed. libdav1d7 is already the newest version (1.5.1-1). libdav1d7 set to manually installed. libcloudproviders0 is already the newest version (0.3.6-3). libcloudproviders0 set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libpython3.13-minimal is already the newest version (3.13.9-1). libpython3.13-minimal set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-2). dbus-system-bus-common set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. libantlr3c-dev is already the newest version (3.4+dfsg-4+b2). libantlr3c-dev set to manually installed. diffutils is already the newest version (1:3.12-1). python3-ordered-set is already the newest version (4.1.0-1). python3-ordered-set set to manually installed. python3-all-dev is already the newest version (3.13.7-1). python3-all-dev set to manually installed. libpam-systemd is already the newest version (258.1-1). libpam-systemd set to manually installed. python3-legacy-cgi is already the newest version (2.6.3-1). python3-legacy-cgi set to manually installed. libboost-atomic1.83-dev is already the newest version (1.83.0-5). libboost-atomic1.83-dev set to manually installed. libhdf5-hl-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-310 set to manually installed. libboost-numpy-dev is already the newest version (1.83.0.2+b2). libboost-numpy-dev set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. libxtst6 is already the newest version (2:1.2.5-1). libxtst6 set to manually installed. libxxhash-dev is already the newest version (0.8.3-2). libxxhash-dev set to manually installed. libnghttp3-dev is already the newest version (1.12.0-1). libnghttp3-dev set to manually installed. python3-sympy is already the newest version (1.14.0-2). python3-sympy set to manually installed. dpkg is already the newest version (1.22.21). libgudev-1.0-0 is already the newest version (238-7). libgudev-1.0-0 set to manually installed. libpam-modules is already the newest version (1.7.0-5). libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. libccp4f0t64 is already the newest version (8.0.0-5). libccp4f0t64 set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). python3-numpy is already the newest version (1:2.3.3+ds-3). python3-numpy set to manually installed. libxxhash0 is already the newest version (0.8.3-2). libxxhash0 set to manually installed. libxcb-render-util0 is already the newest version (0.3.10-1). libxcb-render-util0 set to manually installed. libsvtav1enc2 is already the newest version (2.3.0+dfsg-1). libsvtav1enc2 set to manually installed. libthai-data is already the newest version (0.1.29-2). libthai-data set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libcurl4-openssl-dev is already the newest version (8.17.0~rc2-1). libcurl4-openssl-dev set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). libpopt0 is already the newest version (1.19+dfsg-2). libpopt0 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libdebconfclient0 is already the newest version (0.280). python3-requests is already the newest version (2.32.5+dfsg-1). python3-requests set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. debhelper is already the newest version (13.28). debhelper set to manually installed. libbinutils is already the newest version (2.45-7). libbinutils set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libegl1 is already the newest version (1.7.0-1+b2). libegl1 set to manually installed. libxml2-16 is already the newest version (2.14.6+dfsg-0.1). libxml2-16 set to manually installed. libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. libmunge2 is already the newest version (0.5.16-1). libmunge2 set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. debconf is already the newest version (1.5.91). libccp4c0t64 is already the newest version (8.0.0-5). libccp4c0t64 set to manually installed. libpcre2-16-0 is already the newest version (10.46-1). libpcre2-16-0 set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to manually installed. dbus is already the newest version (1.16.2-2). dbus set to manually installed. libboost-atomic1.83.0 is already the newest version (1.83.0-5). libboost-atomic1.83.0 set to manually installed. python3-pluggy is already the newest version (1.6.0-1). python3-pluggy set to manually installed. libboost-python1.83-dev is already the newest version (1.83.0-5). libboost-python1.83-dev set to manually installed. libclipper-dev is already the newest version (2.1.20201109-2+b3). libclipper-dev set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5). libgmpxx4ldbl set to manually installed. libhdf5-310 is already the newest version (1.14.5+repack-4). libhdf5-310 set to manually installed. fonts-urw-base35 is already the newest version (20200910-8). fonts-urw-base35 set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. unicode-data is already the newest version (16.0.0-1). unicode-data set to manually installed. sfftw-dev is already the newest version (2.1.5-7+b1). sfftw-dev set to manually installed. libasan8 is already the newest version (15.2.0-4). libasan8 set to manually installed. libqt5help5 is already the newest version (5.15.17-3). libqt5help5 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b1). libxcb-randr0 set to manually installed. libwayland-cursor0 is already the newest version (1.24.0-2+b1). libwayland-cursor0 set to manually installed. libboost-numpy1.83-dev is already the newest version (1.83.0-5). libboost-numpy1.83-dev set to manually installed. libabsl20240722 is already the newest version (20240722.0-4). libabsl20240722 set to manually installed. linux-libc-dev is already the newest version (6.16.12-2). linux-libc-dev set to manually installed. libxkbcommon-x11-0 is already the newest version (1.7.0-2.1). libxkbcommon-x11-0 set to manually installed. python3-procrunner is already the newest version (2.3.3-2). python3-procrunner set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. python3-msgpack is already the newest version (1.0.3-3+b5). python3-msgpack set to manually installed. libqt5opengl5t64 is already the newest version (5.15.17+dfsg-4). libqt5opengl5t64 set to manually installed. libqt5widgets5t64 is already the newest version (5.15.17+dfsg-4). libqt5widgets5t64 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). python3-pytest is already the newest version (8.4.2-1). python3-pytest set to manually installed. libopenjp2-7 is already the newest version (2.5.3-2.1). libopenjp2-7 set to manually installed. libaom3 is already the newest version (3.13.1-1). libaom3 set to manually installed. libdrm-common is already the newest version (2.4.127-1). libdrm-common set to manually installed. dconf-service is already the newest version (0.49.0-1). dconf-service set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. libctf-nobfd0 is already the newest version (2.45-7). libctf-nobfd0 set to manually installed. libpython3.13 is already the newest version (3.13.9-1). libpython3.13 set to manually installed. libpmix2t64 is already the newest version (6.0.0+really5.0.8-1). libpmix2t64 set to manually installed. python3-pymol is already the newest version (3.1.0+dfsg-1+b1). python3-pymol set to manually installed. python3-natsort is already the newest version (8.4.0-1). python3-natsort set to manually installed. grep is already the newest version (3.12-1). binutils-riscv64-linux-gnu is already the newest version (2.45-7). binutils-riscv64-linux-gnu set to manually installed. libavahi-common-data is already the newest version (0.8-17). libavahi-common-data set to manually installed. libudev1 is already the newest version (258.1-1). libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. python3-kiwisolver is already the newest version (1.4.10~rc0-1). python3-kiwisolver set to manually installed. xml-core is already the newest version (0.19). xml-core set to manually installed. python3-pyqt5.sip is already the newest version (12.17.1-1). python3-pyqt5.sip set to manually installed. fonts-lyx is already the newest version (2.4.4-2). fonts-lyx set to manually installed. libapparmor1 is already the newest version (4.1.0-1). libapparmor1 set to manually installed. liblzma-dev is already the newest version (5.8.1-2). liblzma-dev set to manually installed. groff-base is already the newest version (1.23.0-9). groff-base set to manually installed. libpython3.13-stdlib is already the newest version (3.13.9-1). libpython3.13-stdlib set to manually installed. libfftw3-dev is already the newest version (3.3.10-2+b1). libfftw3-dev set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). python3-all is already the newest version (3.13.7-1). python3-all set to manually installed. libqt5sql5t64 is already the newest version (5.15.17+dfsg-4). libqt5sql5t64 set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. libicu76 is already the newest version (76.1-4). libicu76 set to manually installed. libwacom-common is already the newest version (2.16.1-1). libwacom-common set to manually installed. libgpg-error0 is already the newest version (1.56-2). libgpg-error0 set to manually installed. libboost-serialization1.83-dev is already the newest version (1.83.0-5). libboost-serialization1.83-dev set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. libglew2.2 is already the newest version (2.2.0-4+b2). libglew2.2 set to manually installed. libgcc-s1 is already the newest version (15.2.0-4). libstdc++-15-dev is already the newest version (15.2.0-4). libstdc++-15-dev set to manually installed. python3-pyparsing is already the newest version (3.1.3-1). python3-pyparsing set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1). libldap-dev set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. libtsan2 is already the newest version (15.2.0-4). libtsan2 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3-opengl is already the newest version (3.1.10+dfsg-1). python3-opengl set to manually installed. libcurl3t64-gnutls is already the newest version (8.17.0~rc2-1). libcurl3t64-gnutls set to manually installed. libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. python3-urllib3 is already the newest version (2.5.0-1). python3-urllib3 set to manually installed. tk8.6-blt2.5 is already the newest version (2.5.3+dfsg-8). tk8.6-blt2.5 set to manually installed. python3-pygments is already the newest version (2.18.0+dfsg-2). python3-pygments set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. libsmartcols1 is already the newest version (2.41.2-4). xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. binutils-common is already the newest version (2.45-7). binutils-common set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libboost-chrono1.83-dev is already the newest version (1.83.0-5). libboost-chrono1.83-dev set to manually installed. jq is already the newest version (1.8.1-4). jq set to manually installed. libglu1-mesa-dev is already the newest version (9.0.2-1.1+b3). libglu1-mesa-dev set to manually installed. perl is already the newest version (5.40.1-6). perl set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libdconf1 is already the newest version (0.49.0-1). libdconf1 set to manually installed. adduser is already the newest version (3.153). adduser set to manually installed. libboost-date-time1.83.0 is already the newest version (1.83.0-5). libboost-date-time1.83.0 set to manually installed. liblz4-dev is already the newest version (1.10.0-4). liblz4-dev set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libucx0 is already the newest version (1.19.0+ds-1). libucx0 set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-2). libpango-1.0-0 set to manually installed. librav1e0.8 is already the newest version (0.8.1-5). librav1e0.8 set to manually installed. libxnvctrl0 is already the newest version (535.171.04-1+b2). libxnvctrl0 set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). python3-hdf5plugin is already the newest version (5.1.0-1). python3-hdf5plugin set to manually installed. xkb-data is already the newest version (2.42-1). xkb-data set to manually installed. python3-mrcfile is already the newest version (1.5.4-2). python3-mrcfile set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. findutils is already the newest version (4.10.0-3). libglx-dev is already the newest version (1.7.0-1+b2). libglx-dev set to manually installed. libaec-dev is already the newest version (1.1.4-2). libaec-dev set to manually installed. libgav1-1 is already the newest version (0.19.0-3+b1). libgav1-1 set to manually installed. libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. libopengl-dev is already the newest version (1.7.0-1+b2). libopengl-dev set to manually installed. libtk8.6 is already the newest version (8.6.17-1). libtk8.6 set to manually installed. libqt5dbus5t64 is already the newest version (5.15.17+dfsg-4). libqt5dbus5t64 set to manually installed. libwxgtk-gl3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxgtk-gl3.2-1t64 set to manually installed. libglib2.0-0t64 is already the newest version (2.86.1-1). libglib2.0-0t64 set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. libpython3-dev is already the newest version (3.13.7-1). libpython3-dev set to manually installed. pymol-data is already the newest version (3.1.0+dfsg-1). pymol-data set to manually installed. libnotify4 is already the newest version (0.8.6-2). libnotify4 set to manually installed. libtcl8.6 is already the newest version (8.6.17+dfsg-1). libtcl8.6 set to manually installed. libc-bin is already the newest version (2.41-12). file is already the newest version (1:5.46-5). file set to manually installed. libgcrypt20 is already the newest version (1.11.2-2). libgcrypt20 set to manually installed. libgprofng0 is already the newest version (2.45-7). libgprofng0 set to manually installed. libimagequant0 is already the newest version (4.4.0-3). libimagequant0 set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b3). libxrandr2 set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.16.0-1). libngtcp2-crypto-ossl-dev set to manually installed. libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. debianutils is already the newest version (5.23.2). libjs-jquery is already the newest version (3.7.1+dfsg+~3.5.33-1). libjs-jquery set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.16.0-1). libngtcp2-crypto-gnutls8 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. libwacom9 is already the newest version (2.16.1-1). libwacom9 set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.17+dfsg-4). libqt5printsupport5t64 set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. libxcb-xinerama0 is already the newest version (1.17.0-2+b1). libxcb-xinerama0 set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.127-1). libdrm-amdgpu1 set to manually installed. libgfortran5 is already the newest version (15.2.0-4). libgfortran5 set to manually installed. hdf5-helpers is already the newest version (1.14.5+repack-4). hdf5-helpers set to manually installed. python3-autocommand is already the newest version (2.2.2-3). python3-autocommand set to manually installed. libsz2 is already the newest version (1.1.4-2). libsz2 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b4). libxfixes3 set to manually installed. libitm1 is already the newest version (15.2.0-4). libitm1 set to manually installed. libpam0g is already the newest version (1.7.0-5). gettext-base is already the newest version (0.23.1-2+b1). gettext-base set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. base-files is already the newest version (14). libgnutls30t64 is already the newest version (3.8.10-2). libgnutls30t64 set to manually installed. cpp-15 is already the newest version (15.2.0-4). cpp-15 set to manually installed. adwaita-icon-theme is already the newest version (49.0-1). adwaita-icon-theme set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-6). perl-modules-5.40 set to manually installed. pybind11-dev is already the newest version (3.0.1-2). pybind11-dev set to manually installed. liblzma5 is already the newest version (5.8.1-2). python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. fftw2 is already the newest version (2.1.5-7+b1). fftw2 set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. liblzf1 is already the newest version (3.6-4+b3). liblzf1 set to manually installed. libclipper2 is already the newest version (2.1.20201109-2+b3). libclipper2 set to manually installed. python3-attr is already the newest version (25.4.0-1). python3-attr set to manually installed. python3-fonttools is already the newest version (4.57.0-2). python3-fonttools set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. openssl is already the newest version (3.5.4-1). openssl set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.4). libfontconfig1 set to manually installed. python3-pil is already the newest version (12.0.0-1). python3-pil set to manually installed. libccp4-data is already the newest version (8.0.0-5). libccp4-data set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libthai0 is already the newest version (0.1.29-2+b1). libthai0 set to manually installed. libvulkan1 is already the newest version (1.4.321.0-1). libvulkan1 set to manually installed. libantlr3c-3.4-0 is already the newest version (3.4+dfsg-4+b2). libantlr3c-3.4-0 set to manually installed. libgles2 is already the newest version (1.7.0-1+b2). libgles2 set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1). libxcb-keysyms1 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-cpp-310 set to manually installed. libdatrie1 is already the newest version (0.2.13-4). libdatrie1 set to manually installed. libubsan1 is already the newest version (15.2.0-4). libubsan1 set to manually installed. python3-platformdirs is already the newest version (4.4.0-1). python3-platformdirs set to manually installed. python3-dev is already the newest version (3.13.7-1). python3-dev set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-cpp-310 set to manually installed. libz3-4 is already the newest version (4.13.3-1). libz3-4 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. python3-wxgtk4.0 is already the newest version (4.2.3+dfsg-2). python3-wxgtk4.0 set to manually installed. libssl3t64 is already the newest version (3.5.4-1). autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libsemanage-common is already the newest version (3.9-1). libsemanage-common set to manually installed. krb5-multidev is already the newest version (1.21.3-5). krb5-multidev set to manually installed. libboost-python-dev is already the newest version (1.83.0.2+b2). libboost-python-dev set to manually installed. libboost-system1.83.0 is already the newest version (1.83.0-5). libboost-system1.83.0 set to manually installed. python3-mpmath is already the newest version (1.3.0-2). python3-mpmath set to manually installed. python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. libccp4-dev is already the newest version (8.0.0-5). libccp4-dev set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. libboost-date-time1.83-dev is already the newest version (1.83.0-5). libboost-date-time1.83-dev set to manually installed. libkadm5srv-mit12 is already the newest version (1.21.3-5). libkadm5srv-mit12 set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. python3-fs is already the newest version (2.4.16-8). python3-fs set to manually installed. libssl-dev is already the newest version (3.5.4-1). libssl-dev set to manually installed. libsepol2 is already the newest version (3.9-2). libsepol2 set to manually installed. libboost-thread1.83-dev is already the newest version (1.83.0-5). libboost-thread1.83-dev set to manually installed. libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. libatk-bridge2.0-0t64 is already the newest version (2.58.1-1). libatk-bridge2.0-0t64 set to manually installed. libssm2 is already the newest version (1.4.0-2+b3). libssm2 set to manually installed. cpp-riscv64-linux-gnu is already the newest version (4:15.2.0-4). cpp-riscv64-linux-gnu set to manually installed. libssm-dev is already the newest version (1.4.0-2+b3). libssm-dev set to manually installed. libatspi2.0-0t64 is already the newest version (2.58.1-1). libatspi2.0-0t64 set to manually installed. libzopfli1 is already the newest version (1.0.3-3). libzopfli1 set to manually installed. python3-tqdm is already the newest version (4.67.1-6). python3-tqdm set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp-dev set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1+b1). libnghttp2-dev set to manually installed. python3-charset-normalizer is already the newest version (3.4.3-1). python3-charset-normalizer set to manually installed. python3-lz4 is already the newest version (4.4.4+dfsg-3). python3-lz4 set to manually installed. libqt5test5t64 is already the newest version (5.15.17+dfsg-4). libqt5test5t64 set to manually installed. libyuv0 is already the newest version (0.0.1919.20250919-1). libyuv0 set to manually installed. python3-matplotlib is already the newest version (3.10.7+dfsg1-1). python3-matplotlib set to manually installed. libpython3-stdlib is already the newest version (3.13.7-1). libpython3-stdlib set to manually installed. libmmdb2-dev is already the newest version (2.0.22-1+b2). libmmdb2-dev set to manually installed. libmount1 is already the newest version (2.41.2-4). libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. passwd is already the newest version (1:4.18.0-2). passwd set to manually installed. libgtk-3-common is already the newest version (3.24.51-1). libgtk-3-common set to manually installed. libaudit1 is already the newest version (1:4.1.2-1). libmtdev1t64 is already the newest version (1.1.7-1). libmtdev1t64 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. libxcb-util1 is already the newest version (0.4.1-1). libxcb-util1 set to manually installed. libstdc++6 is already the newest version (15.2.0-4). libstdc++6 set to manually installed. libsframe2 is already the newest version (2.45-7). libsframe2 set to manually installed. python3-iniconfig is already the newest version (2.1.0-1). python3-iniconfig set to manually installed. python3-pil.imagetk is already the newest version (12.0.0-1). python3-pil.imagetk set to manually installed. python3.13-tk is already the newest version (3.13.9-1). python3.13-tk set to manually installed. scons is already the newest version (4.8.1+dfsg-1). scons set to manually installed. libavif16 is already the newest version (1.3.0-1+b1). libavif16 set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. libcc1-0 is already the newest version (15.2.0-4). libcc1-0 set to manually installed. w3c-sgml-lib is already the newest version (1.3-3). w3c-sgml-lib set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libxdamage1 is already the newest version (1:1.1.6-1+b2). libxdamage1 set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libdouble-conversion3 is already the newest version (3.3.1-2). libdouble-conversion3 set to manually installed. libnl-route-3-200 is already the newest version (3.11.0-2). libnl-route-3-200 set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libwxgtk3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxgtk3.2-1t64 set to manually installed. libavahi-client3 is already the newest version (0.8-17). libavahi-client3 set to manually installed. python3-rlpycairo is already the newest version (0.3.0-4). python3-rlpycairo set to manually installed. libopengl0 is already the newest version (1.7.0-1+b2). libopengl0 set to manually installed. sphinx-rtd-theme-common is already the newest version (3.0.2+dfsg-3). sphinx-rtd-theme-common set to manually installed. python3-pyqt5.qtopengl is already the newest version (5.15.11+dfsg-3). python3-pyqt5.qtopengl set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). gzip is already the newest version (1.13-1). libfuse3-4 is already the newest version (3.17.4-1). libfuse3-4 set to manually installed. libdrm2 is already the newest version (2.4.127-1). libdrm2 set to manually installed. libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. python3-ufolib2 is already the newest version (0.17.1+dfsg1-1). python3-ufolib2 set to manually installed. libboost-serialization1.83.0 is already the newest version (1.83.0-5). libboost-serialization1.83.0 set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. sgml-base is already the newest version (1.31+nmu1). sgml-base set to manually installed. ibverbs-providers is already the newest version (56.1-1+b1). ibverbs-providers set to manually installed. at-spi2-common is already the newest version (2.58.1-1). at-spi2-common set to manually installed. libpython3-all-dev is already the newest version (3.13.7-1). libpython3-all-dev set to manually installed. libwayland-egl1 is already the newest version (1.24.0-2+b1). libwayland-egl1 set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. fontconfig-config is already the newest version (2.15.0-2.4). fontconfig-config set to manually installed. libboost-system1.83-dev is already the newest version (1.83.0-5). libboost-system1.83-dev set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b1). libxcb-shape0 set to manually installed. libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. libcairo2 is already the newest version (1.18.4-1+b1). libcairo2 set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libkrb5-dev is already the newest version (1.21.3-5). libkrb5-dev set to manually installed. libtiffxx6 is already the newest version (4.7.1-1). libtiffxx6 set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. libopenmpi40 is already the newest version (5.0.8-10+b1). libopenmpi40 set to manually installed. libatomic1 is already the newest version (15.2.0-4). libatomic1 set to manually installed. python3-nxmx is already the newest version (0.0.4-1). python3-nxmx set to manually installed. libpangocairo-1.0-0 is already the newest version (1.56.3-2). libpangocairo-1.0-0 set to manually installed. libgdk-pixbuf-2.0-0 is already the newest version (2.44.4+dfsg-1). libgdk-pixbuf-2.0-0 set to manually installed. init-system-helpers is already the newest version (1.69). python3-psutil is already the newest version (7.1.0-1). python3-psutil set to manually installed. gcc-riscv64-linux-gnu is already the newest version (4:15.2.0-4). gcc-riscv64-linux-gnu set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b1). libxcb-glx0 set to manually installed. libgomp1 is already the newest version (15.2.0-4). libgomp1 set to manually installed. fonts-lato is already the newest version (2.015-1). fonts-lato set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libraqm0 is already the newest version (0.10.3-1). libraqm0 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). libgl1 is already the newest version (1.7.0-1+b2). libgl1 set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. libibverbs1 is already the newest version (56.1-1+b1). libibverbs1 set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. libtiff-dev is already the newest version (4.7.1-1). libtiff-dev set to manually installed. libsystemd0 is already the newest version (258.1-1). xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libcurl4t64 is already the newest version (8.17.0~rc2-1). libcurl4t64 set to manually installed. libxcomposite1 is already the newest version (1:0.4.6-1). libxcomposite1 set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libnl-3-200 is already the newest version (3.11.0-2). libnl-3-200 set to manually installed. g++-15 is already the newest version (15.2.0-4). g++-15 set to manually installed. python3-dateutil is already the newest version (2.9.0-4). python3-dateutil set to manually installed. python3-cycler is already the newest version (0.12.1-2). python3-cycler set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libglu1-mesa is already the newest version (9.0.2-1.1+b3). libglu1-mesa set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. shared-mime-info is already the newest version (2.4-5+b3). shared-mime-info set to manually installed. libxcb-icccm4 is already the newest version (0.4.2-1). libxcb-icccm4 set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-fortran-310 set to manually installed. libhwloc15 is already the newest version (2.12.2-1). libhwloc15 set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. libibmad5 is already the newest version (56.1-1+b1). libibmad5 set to manually installed. libgnutls28-dev is already the newest version (3.8.10-2). libgnutls28-dev set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. mawk is already the newest version (1.3.4.20250131-1). coreutils is already the newest version (9.7-3). libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. login.defs is already the newest version (1:4.18.0-2). login.defs set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libqt5network5t64 is already the newest version (5.15.17+dfsg-4). libqt5network5t64 set to manually installed. python3-idna is already the newest version (3.10-1). python3-idna set to manually installed. python3-minimal is already the newest version (3.13.7-1). python3-minimal set to manually installed. python3-scipy is already the newest version (1.16.2-3). python3-scipy set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b1). libxcb1-dev set to manually installed. libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. cpp-15-riscv64-linux-gnu is already the newest version (15.2.0-4). cpp-15-riscv64-linux-gnu set to manually installed. libegl-mesa0 is already the newest version (25.2.5-1). libegl-mesa0 set to manually installed. libevent-pthreads-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-pthreads-2.1-7t64 set to manually installed. sed is already the newest version (4.9-2). libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. python3-chardet is already the newest version (5.2.0+dfsg-2). python3-chardet set to manually installed. libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:15.2.0-4). g++-riscv64-linux-gnu set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.10-2). libgnutls-dane0t64 set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-2). libboost-timer-dev is already the newest version (1.83.0.2+b2). libboost-timer-dev set to manually installed. python3.13-minimal is already the newest version (3.13.9-1). python3.13-minimal set to manually installed. libgl-dev is already the newest version (1.7.0-1+b2). libgl-dev set to manually installed. g++-15-riscv64-linux-gnu is already the newest version (15.2.0-4). g++-15-riscv64-linux-gnu set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. libtinfo6 is already the newest version (6.5+20250216-2). libpng16-16t64 is already the newest version (1.6.50-1). libpng16-16t64 set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. python3-reportlab is already the newest version (4.4.4-2). python3-reportlab set to manually installed. libllvm19 is already the newest version (1:19.1.7-7). libllvm19 set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. bash is already the newest version (5.3-1). libfribidi0 is already the newest version (1.0.16-3). libfribidi0 set to manually installed. libelf1t64 is already the newest version (0.193-3). libelf1t64 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. libp11-kit0 is already the newest version (0.25.9-2). libp11-kit0 set to manually installed. libwayland-client0 is already the newest version (1.24.0-2+b1). libwayland-client0 set to manually installed. libselinux1 is already the newest version (3.9-2). dbus-session-bus-common is already the newest version (1.16.2-2). dbus-session-bus-common set to manually installed. libonig5 is already the newest version (6.9.10-1). libonig5 set to manually installed. libfftw3-bin is already the newest version (3.3.10-2+b1). libfftw3-bin set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. automake is already the newest version (1:1.18.1-2). automake set to manually installed. systemd is already the newest version (258.1-1). systemd set to manually installed. python3-certifi is already the newest version (2025.1.31+ds-1). python3-certifi set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libinput-bin is already the newest version (1.28.1-1). libinput-bin set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. perl-base is already the newest version (5.40.1-6). dh-python is already the newest version (6.20250414). dh-python set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5). libgmp-dev set to manually installed. libinput10 is already the newest version (1.28.1-1). libinput10 set to manually installed. libmd4c0 is already the newest version (0.5.2-2+b1). libmd4c0 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. libpcre2-32-0 is already the newest version (10.46-1). libpcre2-32-0 set to manually installed. libgtk-3-0t64 is already the newest version (3.24.51-1). libgtk-3-0t64 set to manually installed. libann-cctbx-dev is already the newest version (1.1.2+doc-9+b1). libann-cctbx-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libharfbuzz0b is already the newest version (12.1.0-1). libharfbuzz0b set to manually installed. dbus-bin is already the newest version (1.16.2-2). dbus-bin set to manually installed. libhwloc-plugins is already the newest version (2.12.2-1). libhwloc-plugins set to manually installed. libgbm1 is already the newest version (25.2.5-1). libgbm1 set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b1). libxcb-dri3-0 set to manually installed. python3-pint is already the newest version (0.25-1). python3-pint set to manually installed. libann-cctbx0 is already the newest version (1.1.2+doc-9+b1). libann-cctbx0 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. libatk1.0-0t64 is already the newest version (2.58.1-1). libatk1.0-0t64 set to manually installed. dbus-user-session is already the newest version (1.16.2-2). dbus-user-session set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b1). libxcb-xkb1 set to manually installed. python3-tk is already the newest version (3.13.9-1). python3-tk set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. gcc-15 is already the newest version (15.2.0-4). gcc-15 set to manually installed. libboost-timer1.83.0 is already the newest version (1.83.0-5). libboost-timer1.83.0 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libavahi-common3 is already the newest version (0.8-17). libavahi-common3 set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-fortran-310 set to manually installed. libwxbase3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxbase3.2-1t64 set to manually installed. dh-exec is already the newest version (0.30). dh-exec set to manually installed. libqt5gui5t64 is already the newest version (5.15.17+dfsg-4). libqt5gui5t64 set to manually installed. python3-contourpy is already the newest version (1.3.1-2). python3-contourpy set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. python3-wheel is already the newest version (0.46.1-2). python3-wheel set to manually installed. dbus-daemon is already the newest version (1.16.2-2). dbus-daemon set to manually installed. python-matplotlib-data is already the newest version (3.10.7+dfsg1-1). python-matplotlib-data set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libp11-kit-dev is already the newest version (0.25.9-2). libp11-kit-dev set to manually installed. gettext is already the newest version (0.23.1-2+b1). gettext set to manually installed. libhdf5-dev is already the newest version (1.14.5+repack-4). libhdf5-dev set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libqt5core5t64 is already the newest version (5.15.17+dfsg-4). libqt5core5t64 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. mesa-libgallium is already the newest version (25.2.5-1). mesa-libgallium set to manually installed. libice6 is already the newest version (2:1.1.1-1). libice6 set to manually installed. python3-biopython is already the newest version (1.85+dfsg-5). python3-biopython set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. fonts-font-awesome is already the newest version (5.0.10+really4.7.0~dfsg-4.1). fonts-font-awesome set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libgl1-mesa-dri is already the newest version (25.2.5-1). libgl1-mesa-dri set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. libepoxy0 is already the newest version (1.5.10-2). libepoxy0 set to manually installed. libfabric1 is already the newest version (2.1.0-1.1). libfabric1 set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-8). libjs-sphinxdoc set to manually installed. libxkbcommon0 is already the newest version (1.7.0-2.1). libxkbcommon0 set to manually installed. fontconfig is already the newest version (2.15.0-2.4). fontconfig set to manually installed. libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. python3-numpy-dev is already the newest version (1:2.3.3+ds-3). python3-numpy-dev set to manually installed. libqt5xml5t64 is already the newest version (5.15.17+dfsg-4). libqt5xml5t64 set to manually installed. liblcms2-2 is already the newest version (2.16-2). liblcms2-2 set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. libpython3.13-dev is already the newest version (3.13.9-1). libpython3.13-dev set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libcolord2 is already the newest version (1.4.8-1). libcolord2 set to manually installed. binutils is already the newest version (2.45-7). binutils set to manually installed. libuuid1 is already the newest version (2.41.2-4). libsensors5 is already the newest version (1:3.6.2-2). libsensors5 set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-1+b4). libxxf86vm1 set to manually installed. libsystemd-shared is already the newest version (258.1-1). libsystemd-shared set to manually installed. libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. librdmacm1t64 is already the newest version (56.1-1+b1). librdmacm1t64 set to manually installed. python3-h5py-serial is already the newest version (3.14.0-3). python3-h5py-serial set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. mount is already the newest version (2.41.2-4). mount set to manually installed. libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. libidn2-dev is already the newest version (2.3.8-4). libidn2-dev set to manually installed. libctf0 is already the newest version (2.45-7). libctf0 set to manually installed. base-passwd is already the newest version (3.6.7). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. libboost-thread-dev is already the newest version (1.83.0.2+b2). libboost-thread-dev set to manually installed. python3-pip is already the newest version (25.2+dfsg-1). python3-pip set to manually installed. libunbound8 is already the newest version (1.24.1-1). libunbound8 set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b4). libxinerama1 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libtool is already the newest version (2.5.4-7). libtool set to manually installed. libcap2 is already the newest version (1:2.75-10+b1). python3.13 is already the newest version (3.13.9-1). python3.13 set to manually installed. libeigen3-dev is already the newest version (3.4.0-5). libeigen3-dev set to manually installed. libfftw3-double3 is already the newest version (3.3.10-2+b1). libfftw3-double3 set to manually installed. sfftw2 is already the newest version (2.1.5-7+b1). sfftw2 set to manually installed. libboost-chrono1.83.0t64 is already the newest version (1.83.0-5). libboost-chrono1.83.0t64 set to manually installed. libc6 is already the newest version (2.41-12). python3-flexcache is already the newest version (0.3-2). python3-flexcache set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-2). libzstd-dev set to manually installed. python3-six is already the newest version (1.17.0-1). python3-six set to manually installed. libaec0 is already the newest version (1.1.4-2). libaec0 set to manually installed. libevdev2 is already the newest version (1.13.4+dfsg-1). libevdev2 set to manually installed. python3-pycbf is already the newest version (0.9.7+dfsg1-5.1). python3-pycbf set to manually installed. gcc-15-riscv64-linux-gnu is already the newest version (15.2.0-4). gcc-15-riscv64-linux-gnu set to manually installed. libboost-numpy1.83.0 is already the newest version (1.83.0-5). libboost-numpy1.83.0 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. dconf-gsettings-backend is already the newest version (0.49.0-1). dconf-gsettings-backend set to manually installed. libmmdb2-0 is already the newest version (2.0.22-1+b2). libmmdb2-0 set to manually installed. blt is already the newest version (2.5.3+dfsg-8). blt set to manually installed. liblz4-1 is already the newest version (1.10.0-4). liblz4-1 set to manually installed. ocl-icd-libopencl1 is already the newest version (2.3.4-1). ocl-icd-libopencl1 set to manually installed. python3.13-dev is already the newest version (3.13.9-1). python3.13-dev set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libglx-mesa0 is already the newest version (25.2.5-1). libglx-mesa0 set to manually installed. libglut3.12 is already the newest version (3.4.0-6). libglut3.12 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.10-2). libgnutls-openssl27t64 set to manually installed. rsync is already the newest version (3.4.1+ds1-6). rsync set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11). libgraphite2-3 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libpangoft2-1.0-0 is already the newest version (1.56.3-2). libpangoft2-1.0-0 set to manually installed. libfftw3-long3 is already the newest version (3.3.10-2+b1). libfftw3-long3 set to manually installed. libboost-timer1.83-dev is already the newest version (1.83.0-5). libboost-timer1.83-dev set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b1). libxcb-sync1 set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. python3-lxml is already the newest version (6.0.2-1). python3-lxml set to manually installed. dash is already the newest version (0.5.12-12). python3-cairo is already the newest version (1.27.0-2). python3-cairo set to manually installed. libcairo-gobject2 is already the newest version (1.18.4-1+b1). libcairo-gobject2 set to manually installed. util-linux is already the newest version (2.41.2-4). libfftw3-single3 is already the newest version (3.3.10-2+b1). libfftw3-single3 set to manually installed. fftw-dev is already the newest version (2.1.5-7+b1). fftw-dev set to manually installed. sysvinit-utils is already the newest version (3.15-5). libngtcp2-dev is already the newest version (1.16.0-1). libngtcp2-dev set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. gcc-15-base is already the newest version (15.2.0-4). librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. libsemanage2 is already the newest version (3.9-1). libsemanage2 set to manually installed. python3-pyqt5 is already the newest version (5.15.11+dfsg-3). python3-pyqt5 set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libxslt1.1 is already the newest version (1.1.43-0.2). libxslt1.1 set to manually installed. python3-zopfli is already the newest version (0.2.3.post1-1). python3-zopfli set to manually installed. libboost-thread1.83.0 is already the newest version (1.83.0-5). libboost-thread1.83.0 set to manually installed. python3-freetype is already the newest version (2.5.1-2). python3-freetype set to manually installed. libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. python3-flexparser is already the newest version (0.4-1). python3-flexparser set to manually installed. liblsan0 is already the newest version (15.2.0-4). liblsan0 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1). libpixman-1-0 set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. libcbf-dev is already the newest version (0.9.7+dfsg1-5.1). libcbf-dev set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b2). libxcb-image0 set to manually installed. python3 is already the newest version (3.13.7-1). python3 set to manually installed. libgdk-pixbuf2.0-common is already the newest version (2.44.4+dfsg-1). libgdk-pixbuf2.0-common set to manually installed. libjq1 is already the newest version (1.8.1-4). libjq1 set to manually installed. libcom-err2 is already the newest version (1.47.2-3+b3). libcom-err2 set to manually installed. libboost-python1.83.0 is already the newest version (1.83.0-5). libboost-python1.83.0 set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. hostname is already the newest version (3.25). libnetcdf22 is already the newest version (1:4.9.3-1+b1). libnetcdf22 set to manually installed. libcbf1t64 is already the newest version (0.9.7+dfsg1-5.1). libcbf1t64 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-4). libgcc-15-dev set to manually installed. libperl5.40 is already the newest version (5.40.1-6). libperl5.40 set to manually installed. libqt5designer5 is already the newest version (5.15.17-3). libqt5designer5 set to manually installed. libpciaccess0 is already the newest version (0.17-3+b3). libpciaccess0 set to manually installed. gtk-update-icon-cache is already the newest version (4.20.2+ds-1). gtk-update-icon-cache set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW (Reading database ... 62865 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.f67noklcQW... I: success in 603.4320 seconds Downloading dependency 618 of 631: python3:riscv64=3.13.7-1 Downloading dependency 619 of 631: libgdk-pixbuf2.0-common:riscv64=2.44.4+dfsg-1 Downloading dependency 620 of 631: libjq1:riscv64=1.8.1-4 Downloading dependency 621 of 631: libcom-err2:riscv64=1.47.2-3+b3 Downloading dependency 622 of 631: libboost-python1.83.0:riscv64=1.83.0-5 Downloading dependency 623 of 631: libpkgconf3:riscv64=1.8.1-4 Downloading dependency 624 of 631: hostname:riscv64=3.25 Downloading dependency 625 of 631: libnetcdf22:riscv64=1:4.9.3-1+b1 Downloading dependency 626 of 631: libcbf1t64:riscv64=0.9.7+dfsg1-5.1 Downloading dependency 627 of 631: libgcc-15-dev:riscv64=15.2.0-4 Downloading dependency 628 of 631: libperl5.40:riscv64=5.40.1-6 Downloading dependency 629 of 631: libqt5designer5:riscv64=5.15.17-3 Downloading dependency 630 of 631: libpciaccess0:riscv64=0.17-3+b3 Downloading dependency 631 of 631: gtk-update-icon-cache:riscv64=4.20.2+ds-1 env --chdir=/srv/rebuilderd/tmp/rebuilderd9G8i4q/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1761327529 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildFJBYO_/debrebuild.sbuildrc.OdVupobL0P4n sbuild --build=riscv64 --host=riscv64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildFJBYO_/debrebuild.tar.VgtrJHhROBlZ --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=cctbx-2025.2+ds2+~3.23.0+ds1 /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on localhost +==============================================================================+ | cctbx 2025.2+ds2+~3.23.0+ds1-1 (riscv64) Mon, 24 Nov 2025 10:57:27 +0000 | +==============================================================================+ Package: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Source Version: 2025.2+ds2+~3.23.0+ds1-1 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildFJBYO_/debrebuild.tar.VgtrJHhROBlZ to /srv/rebuilderd/tmp/tmp.sbuild.e188CQPJ2m... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 24 Nov 2025 10:58:26 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc exists in /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 24 Nov 2025 10:58:30 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-legacy-cgi, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential Filtered Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-legacy-cgi, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-T3Pm2A/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 24 Nov 2025 10:58:43 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x) +------------------------------------------------------------------------------+ | Build environment Mon, 24 Nov 2025 10:58:46 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.6.87-win2030 #2025.04.20.18.43+bb0c69aea SMP Sun Apr 20 18:58:14 UTC 2025 riscv64 (riscv64) Toolchain package versions: binutils_2.45-7 dpkg-dev_1.22.21 g++-15_15.2.0-4 gcc-15_15.2.0-4 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-4 libstdc++6_15.2.0-4 linux-libc-dev_6.16.12-2 Package versions: adduser_3.153 adwaita-icon-theme_49.0-1 architecture-properties_0.2.6 at-spi2-common_2.58.1-1 autoconf_2.72-3.1 automake_1:1.18.1-2 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 binutils_2.45-7 binutils-common_2.45-7 binutils-riscv64-linux-gnu_2.45-7 blt_2.5.3+dfsg-8 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 comerr-dev_2.1-1.47.2-3+b3 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-4 cpp-15-riscv64-linux-gnu_15.2.0-4 cpp-riscv64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 dbus_1.16.2-2 dbus-bin_1.16.2-2 dbus-daemon_1.16.2-2 dbus-session-bus-common_1.16.2-2 dbus-system-bus-common_1.16.2-2 dbus-user-session_1.16.2-2 dconf-gsettings-backend_0.49.0-1 dconf-service_0.49.0-1 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-exec_0.30 dh-python_6.20250414 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 fftw-dev_2.1.5-7+b1 fftw2_2.1.5-7+b1 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.4 fontconfig-config_2.15.0-2.4 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 fonts-lato_2.015-1 fonts-lyx_2.4.4-2 fonts-urw-base35_20200910-8 g++_4:15.2.0-4 g++-15_15.2.0-4 g++-15-riscv64-linux-gnu_15.2.0-4 g++-riscv64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-4 gcc-15-base_15.2.0-4 gcc-15-riscv64-linux-gnu_15.2.0-4 gcc-riscv64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gtk-update-icon-cache_4.20.2+ds-1 gzip_1.13-1 hdf5-helpers_1.14.5+repack-4 hicolor-icon-theme_0.18-2 hostname_3.25 ibverbs-providers_56.1-1+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 jq_1.8.1-4 krb5-multidev_1.21.3-5 libabsl20240722_20240722.0-4 libacl1_2.3.2-2+b1 libaec-dev_1.1.4-2 libaec0_1.1.4-2 libann-cctbx-dev_1.1.2+doc-9+b1 libann-cctbx0_1.1.2+doc-9+b1 libantlr3c-3.4-0_3.4+dfsg-4+b2 libantlr3c-dev_3.4+dfsg-4+b2 libaom3_3.13.1-1 libapparmor1_4.1.0-1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-4 libatk-bridge2.0-0t64_2.58.1-1 libatk1.0-0t64_2.58.1-1 libatomic1_15.2.0-4 libatspi2.0-0t64_2.58.1-1 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1 libavahi-client3_0.8-17 libavahi-common-data_0.8-17 libavahi-common3_0.8-17 libavif16_1.3.0-1+b1 libbinutils_2.45-7 libblas3_3.12.1-7 libblkid1_2.41.2-4 libboost-atomic1.83-dev_1.83.0-5 libboost-atomic1.83.0_1.83.0-5 libboost-chrono1.83-dev_1.83.0-5 libboost-chrono1.83.0t64_1.83.0-5 libboost-date-time1.83-dev_1.83.0-5 libboost-date-time1.83.0_1.83.0-5 libboost-dev_1.83.0.2+b2 libboost-numpy-dev_1.83.0.2+b2 libboost-numpy1.83-dev_1.83.0-5 libboost-numpy1.83.0_1.83.0-5 libboost-python-dev_1.83.0.2+b2 libboost-python1.83-dev_1.83.0-5 libboost-python1.83.0_1.83.0-5 libboost-serialization1.83-dev_1.83.0-5 libboost-serialization1.83.0_1.83.0-5 libboost-system1.83-dev_1.83.0-5 libboost-system1.83.0_1.83.0-5 libboost-thread-dev_1.83.0.2+b2 libboost-thread1.83-dev_1.83.0-5 libboost-thread1.83.0_1.83.0-5 libboost-timer-dev_1.83.0.2+b2 libboost-timer1.83-dev_1.83.0-5 libboost-timer1.83.0_1.83.0-5 libboost1.83-dev_1.83.0-5 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcairo-gobject2_1.18.4-1+b1 libcairo2_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcbf-dev_0.9.7+dfsg1-5.1 libcbf1t64_0.9.7+dfsg1-5.1 libcc1-0_15.2.0-4 libccp4-data_8.0.0-5 libccp4-dev_8.0.0-5 libccp4c0t64_8.0.0-5 libccp4f0t64_8.0.0-5 libclipper-dev_2.1.20201109-2+b3 libclipper2_2.1.20201109-2+b3 libcloudproviders0_0.3.6-3 libcolord2_1.4.8-1 libcom-err2_1.47.2-3+b3 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-7 libctf0_2.45-7 libcups2t64_2.4.14-1 libcurl3t64-gnutls_8.17.0~rc2-1 libcurl4-openssl-dev_8.17.0~rc2-1 libcurl4t64_8.17.0~rc2-1 libdatrie1_0.2.13-4 libdav1d7_1.5.1-1 libdb5.3t64_5.3.28+dfsg2-10 libdbus-1-3_1.16.2-2 libdconf1_0.49.0-1 libdebconfclient0_0.280 libdebhelper-perl_13.28 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdouble-conversion3_3.3.1-2 libdpkg-perl_1.22.21 libdrm-amdgpu1_2.4.127-1 libdrm-common_2.4.127-1 libdrm2_2.4.127-1 libedit2_3.1-20250104-1 libegl-mesa0_25.2.5-1 libegl1_1.7.0-1+b2 libeigen3-dev_3.4.0-5 libelf1t64_0.193-3 libepoxy0_1.5.10-2 libevdev2_1.13.4+dfsg-1 libevent-2.1-7t64_2.1.12-stable-10+b1 libevent-core-2.1-7t64_2.1.12-stable-10+b1 libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libfabric1_2.1.0-1.1 libffi8_3.5.2-2 libfftw3-bin_3.3.10-2+b1 libfftw3-dev_3.3.10-2+b1 libfftw3-double3_3.3.10-2+b1 libfftw3-long3_3.3.10-2+b1 libfftw3-single3_3.3.10-2+b1 libfile-stripnondeterminism-perl_1.15.0-1 libfontconfig1_2.15.0-2.4 libfontenc1_1:1.1.8-1+b2 libfreetype6_2.13.3+dfsg-1 libfribidi0_1.0.16-3 libfuse3-4_3.17.4-1 libgav1-1_0.19.0-3+b1 libgbm1_25.2.5-1 libgcc-15-dev_15.2.0-4 libgcc-s1_15.2.0-4 libgcrypt20_1.11.2-2 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgdk-pixbuf-2.0-0_2.44.4+dfsg-1 libgdk-pixbuf2.0-common_2.44.4+dfsg-1 libgfortran5_15.2.0-4 libgl-dev_1.7.0-1+b2 libgl1_1.7.0-1+b2 libgl1-mesa-dri_25.2.5-1 libgles2_1.7.0-1+b2 libglew2.2_2.2.0-4+b2 libglib2.0-0t64_2.86.1-1 libglu1-mesa_9.0.2-1.1+b3 libglu1-mesa-dev_9.0.2-1.1+b3 libglut3.12_3.4.0-6 libglvnd0_1.7.0-1+b2 libglx-dev_1.7.0-1+b2 libglx-mesa0_25.2.5-1 libglx0_1.7.0-1+b2 libgmp-dev_2:6.3.0+dfsg-5 libgmp10_2:6.3.0+dfsg-5 libgmpxx4ldbl_2:6.3.0+dfsg-5 libgnutls-dane0t64_3.8.10-2 libgnutls-openssl27t64_3.8.10-2 libgnutls28-dev_3.8.10-2 libgnutls30t64_3.8.10-2 libgomp1_15.2.0-4 libgpg-error0_1.56-2 libgprofng0_2.45-7 libgraphite2-3_1.3.14-11 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libgtk-3-0t64_3.24.51-1 libgtk-3-common_3.24.51-1 libgudev-1.0-0_238-7 libharfbuzz0b_12.1.0-1 libhdf5-310_1.14.5+repack-4 libhdf5-cpp-310_1.14.5+repack-4 libhdf5-dev_1.14.5+repack-4 libhdf5-fortran-310_1.14.5+repack-4 libhdf5-hl-310_1.14.5+repack-4 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x11proto-dev_2024.1-1 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xkb-data_2.42-1 xml-core_0.19 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.6.0-1 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Mon, 24 Nov 2025 10:58:46 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cctbx Binary: libcctbx0, libcctbx-dev, python3-cctbx Architecture: amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x Version: 2025.2+ds2+~3.23.0+ds1-1 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Radostan Riedel , Roland Mas , Homepage: https://github.com/cctbx/cctbx_project Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/cctbx Vcs-Git: https://salsa.debian.org/science-team/cctbx.git Testsuite: autopkgtest Testsuite-Triggers: bitshuffle, g++, python3-all, python3-dials-data, python3-h5py, python3-pytest, python3-pytest-mock, python3-pytest-regressions Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython , python3-h5py (>= 3) , python3-hdf5plugin , python3-legacy-cgi , python3-matplotlib , python3-mrcfile , python3-msgpack , python3-natsort , python3-numpy , python3-nxmx , python3-ordered-set , python3-pint , python3-pip, python3-procrunner , python3-psutil , 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cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 423376 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz Files: 2380dd554091f2aa476df013371ae440 379044 cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz c5d68253419b1e6fe15068e5e5631334 23958624 cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 0941877dab1bc736ff813c8e16a0ac9c 423376 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmj7u+UACgkQ0w3s0lmT IvwxYA//WlvDftVT96eJ6plzOQNDnScJ1PGwZHWSN7hAy992JZNSrTTTRSXnyLJt 7OOP0+Li2lVe/S5j5jsub/KpNRWnYOsYLf+1CvcWVXfCEeTr55+6JF8XykOJN9Ys XHh68VLp3EhJEmkEWi6dWCSaj2hi6ZArj8jTF9/tCpOsC6MCcHYNHPCSZoahoabT feRNFG4zyjPV+A1FTzuKGz8NnfBRL+DW4wNXC558dBjiB1elT1v3svr6Lmy0KICA nG6xCxOUNsGCB8WYZ4ByOJTJ8jPK9+y7bQEdicr55lYghEo5JqRtnx4+Bt1D0lHD SOQByiCKZVwLcoL4pFfra4ORPAvulV3bEAjIgH6z5Q8+ibiQcXtBgLoFyqMXiaZI 06zVtKwN2XwbYFgYNFixiLCD2nj9HhBNABBZGDVDWC3K9aiiCPVSgoSRVHbo8ILS 0GmoeAN/06N9KB0QfQtlvTfYNNbfyNlvD89n4jgDO3E+hPpiciITb9jl3F5FaHzA 8G8R8ByjUF5ltYuclXMOmbj58J6GtzYtVciCloMeT+AMgB1c4WlTUcayEzFDk5oL qkFv09ONe+kol1C+lwxkw9WwZqHCZwd4xtHlBOazN6gGUSgPYZqoyv9m34HuIV0n OoEhyJyJzRfw8aJrcvEbn0j47RBr92E4enI/x8TSOVKEq4KNhp4= =BtNP -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc: unsupported subcommand dpkg-source: info: extracting cctbx in /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 dpkg-source: info: unpacking cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz dpkg-source: info: unpacking cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz dpkg-source: info: unpacking cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying workaround_env_config.patch dpkg-source: info: applying boost_adaptbx.patch dpkg-source: info: applying reproducible-timestamp.patch dpkg-source: info: applying libtbx_env-per-python-version.patch dpkg-source: info: applying iotbx_with_system_libraries.patch dpkg-source: info: applying 0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch dpkg-source: info: applying 0009-scons-soname.patch dpkg-source: info: applying 0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch dpkg-source: info: applying 0011-dxtbx-use-the-system-libraries.patch dpkg-source: info: applying 0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dpkg-source: info: applying 0015-dxtbx-adapte-the-boost_python-link-name.patch dpkg-source: info: applying 0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch dpkg-source: info: applying 0017-cctbx-do-not-hide-sign-comparison.patch dpkg-source: info: applying 0017-dxtbx-fix-for-unsigned-char-arch.patch dpkg-source: info: applying 0016-unactivated-ucif-compilation.patch dpkg-source: info: applying 0017-smtbx-save-the-generated-test-file-under-tmp.patch dpkg-source: info: applying 0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch dpkg-source: info: applying 0019-cbflib_adapter-link-cbf-private-with-cbf.patch dpkg-source: info: applying 0020-spotfinder-link-with-dxtbxspotfinder.patch dpkg-source: info: applying 0021-rstbx-link-with-ann_adaptor.patch dpkg-source: info: applying 0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch dpkg-source: info: applying 0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch dpkg-source: info: applying 0024-more-ann-ann-cctbx.patch dpkg-source: info: applying 0031-Add-missing-ctdint-header.patch dpkg-source: info: applying 0032-no-future.patch dpkg-source: info: applying 0027-Replace-unmaintained-orderedset-with-ordered_set.patch dpkg-source: info: applying 0027-Numpy-2-compat-from-upstream.patch dpkg-source: info: applying 0028-Fix-pip-invocation.patch dpkg-source: info: applying 0029-Fix-Python-syntax-warnings.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1761327529 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package cctbx dpkg-buildpackage: info: source version 2025.2+ds2+~3.23.0+ds1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources dh_auto_clean pybuild --clean -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' (and everything under it) 'build/bdist.linux-riscv64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; find . -name __pycache__ -type d -exec rm -rf {} \; rm -f setup.py rm -rf annlib annlib_adaptbx rm -rf ccp4io ccp4io_adaptbx rm -rf gui_resources make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars debian/files rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/ debian/python3-cctbx/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources # configure the cctbx python modules dh_auto_configure pybuild --configure -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py config running config # configure dxtbx python modules dh_auto_configure --sourcedirectory=dxtbx pybuild --configure -i python{version} -p 3.13 --dir dxtbx I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running config # configure the cctbx libtbx build system dh_auto_configure -- -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ \ && {interpreter} /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" pybuild --configure -i python{version} -p 3.13 -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ && {interpreter} /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" I: pybuild base:311: mkdir -p '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io Python: 3.13.9 "/usr/bin/python3.13" Compiler: default Build mode: debug Warning level: 0 Precompiled Headers: False Static libraries: False Static exe: False Scan Boost headers: False Write full flex_fwd.h files: False Build Boost.Python extensions: True Define BOOST_PYTHON_NO_PY_SIGNATURES: False Define BOOST_PYTHON_BOOL_INT_STRICT: True Enable OpenMP if possible: False Boost threads enabled: True Enable CUDA: False Enable KOKKOS: False Use conda: False Use opt_resources if available: False Use environment flags: True Enable C++11: False CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 command_version_suffix: None Relocatable paths anchored at: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ Top-down list of all modules involved: wxtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/wxtbx" serialtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/serialtbx" rstbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx" spotfinder "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder" mmtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx" gltbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx" dxtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx" iotbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx" smtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx" ucif "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif" crys3d "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d" cctbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx" chiltbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/chiltbx" ccp4io+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx" cbflib_adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx" annlib+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx" scitbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx" fable "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable" cma_es "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cma_es" omptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx" boost+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx" tbxx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx" libtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx" Creating files in build directory: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_" dispatcher_include_template.sh dispatcher_head.sh setpaths.sh setpaths.csh setpaths_all.sh setpaths_all.csh setpaths_debug.sh unsetpaths.sh setpaths_debug.csh unsetpaths.csh SConstruct Makefile run_tests.csh Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/wxtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/libtbx_refresh.py" Generating C++ header files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/boost_python" Using fable to convert scitbx/lbfgs.f Updating entry points for scitbx 1 entries for entry point pytest_randomly.random_seeder Obtaining file:///build/reproducible-path/cctbx-2025.2%2Bds2%2B~3.23.0%2Bds1/dxtbx Checking if build backend supports build_editable: started Checking if build backend supports build_editable: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Installing collected packages: dxtbx DEPRECATION: Legacy editable install of dxtbx==3.23.0 from file:///build/reproducible-path/cctbx-2025.2%2Bds2%2B~3.23.0%2Bds1/dxtbx (setup.py develop) is deprecated. pip 25.3 will enforce this behaviour change. A possible replacement is to add a pyproject.toml or enable --use-pep517, and use setuptools >= 64. If the resulting installation is not behaving as expected, try using --config-settings editable_mode=compat. Please consult the setuptools documentation for more information. Discussion can be found at https://github.com/pypa/pip/issues/11457 Running setup.py develop for dxtbx Successfully installed dxtbx Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/cctbx/eltbx" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/cctbx/boost_python" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/smtbx/boost_python" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/libtbx_refresh.py" Using fable to convert iotbx/pdb/hybrid_36_f.f Writing: iotbx/pdb/hybrid_36_fem.cpp Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/gltbx" fonts: 8x13 9x15 10x20 Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/libtbx_refresh.py" Done. make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # build the python modules dh_auto_build pybuild --build -i python{version} -p 3.13 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx copying qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx copying qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx copying omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils copying libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification copying mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification copying mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa copying mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space copying mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space copying mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment copying mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr copying mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr copying mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias copying mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias copying mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal copying xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal copying xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms copying xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables copying xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs copying xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation copying xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation copying xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output copying xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output copying xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine copying xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics copying xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family copying spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family copying spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support copying spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support copying spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util copying iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos copying simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos copying simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel copying simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers copying qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers copying qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering copying cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math copying cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family copying smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators copying smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure copying smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors copying smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl copying smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks copying smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio copying smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct copying smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line copying cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs copying crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs copying crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family copying rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family copying rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core copying rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core copying rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots copying rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots copying rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors copying rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors copying rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass copying rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass copying rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib copying scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random copying scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils copying scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils copying scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree copying scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree copying scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix copying scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix copying scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse copying scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx copying scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python copying scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface copying scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface copying scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body copying scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body copying scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner copying scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner copying scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family copying cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell copying cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering # build the dxtbx python module dh_auto_build --sourcedirectory=dxtbx pybuild --build -i python{version} -p 3.13 --dir dxtbx I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running build running build_py creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python copying src/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python copying src/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python # build the cctbx extensions and libraries dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 4" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 4" I: pybuild base:311: cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && ./bin/libtbx.scons -j 4 scons: Reading SConscript files ... /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/SConscript:1414: SyntaxWarning: invalid escape sequence '\.' cuda_version = re.findall('release [0-9]+\.*[0-9]+', line) libtbx.scons: using flags from initial environment: CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 libtbx.scons: OpenMP is disabled. BOOST_PYTHON_LIB_VERSION: boost_python313 BOOST_NUMPY_LIB_VERSION: boost_numpy313 BOOST_VERSION: 108300 Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cbflib.tst_memory' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.getting_started' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.sym_equiv_sites' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.convert_ccp4_symop_lib' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.lattice_symmetry' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.find_distances' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.sys_abs_equiv_space_groups' scons: done reading SConscript files. scons: Building targets ... g++ -o annlib_adaptbx/ann/ann_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -Iannlib_adaptbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/src -Iannlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/ann_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o annlib_adaptbx/ann/boost_python/annlib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/usr/include/python3.13 -Iannlib_adaptbx/ann/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/src -Iannlib_adaptbx/ann/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/annlib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/blobs_cmd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/blobs_cmd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/asymmetric_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/skeletons.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/skeletons.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/dijkstra.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_reader.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/map_reader.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_writer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/map_writer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/cut.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1' g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/basic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/basic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/it1992.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/wk1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/n_gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/fp_fdp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_73_84.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_73_84.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/icsd_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/icsd_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/covalent_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/covalent_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/neutron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/neutron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_13_24.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_73_82.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_73_82.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/tiny_pse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/tiny_pse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/wavelengths.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/wavelengths.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/attenuation_coefficient.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/attenuation_coefficient.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/bricks.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/bricks.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/change_of_basis_op.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/group_codes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/hall_in.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_tr.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/lattice_tr.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/miller.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/miller.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_ref_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reciprocal_space_ref_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/row_echelon_solve.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/hall_symbol_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/hall_symbol_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/matrix_group_code_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/matrix_group_code_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/normalizer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/normalizer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/uctbx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/uctbx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/spoil_optimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/crystal_orientation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o omptbx/stubs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx/stubs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1' g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm Create symlinks for: 'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1' g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1' g++ -o lib/libasymmetric_map.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libasymmetric_map.so.0 cctbx/maptbx/asymmetric_map.o cctbx/maptbx/skeletons.o cctbx/maptbx/dijkstra.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm Create symlinks for: 'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so.0'->'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1' g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_structure_comparison_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/maximum_clique_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/metric_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/metric_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/utility_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/utility_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/hybrid_times_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/hybrid_times_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/meta_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/meta_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/optional_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/rational_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/std_pair_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/boost_thread_test.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/python_streambuf_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tuple_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/buffer_based_service.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/mar_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/tst_memory.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/fortran_call_stubs.c gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/printf_wrappers.c g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/aniso_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/aniso_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/fixed_u_eq_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/isotropic_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/isotropic_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigid_bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/rigid_bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/rigu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/adptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/adptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/anharmonic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/anharmonic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/hirshfeld.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/hirshfeld.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_hendrickson_lattman.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_hendrickson_lattman.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_miller_index.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_miller_index.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_xray_scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_xray_scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/emma_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/emma_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/french_wilson_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/french_wilson_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/orientation_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/orientation_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/statistics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/statistics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/covariance/boost_python/covariance_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/asu_clusters_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/close_packing_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/close_packing_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/coordination_sequences_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/coordination_sequences_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/crystal_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/crystal_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/direct_space_asu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/incremental_pairs_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/incremental_pairs_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/symmetry_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/symmetry_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/dmtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/dmtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/triplet_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_phase_relation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/triplet_phase_relation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/attenuation_coefficient_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/chemical_elements_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/chemical_elements_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/covalent_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/covalent_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/fp_fdp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/fp_fdp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/henke_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/henke_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/icsd_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/icsd_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/neutron_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/neutron_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/sasaki_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/sasaki_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/tiny_pse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/tiny_pse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/wavelengths_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/wavelengths_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/xray_scattering_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/xray_scattering_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/convert_ccp4_symop_lib.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/find_distances.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/find_distances.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/getting_started.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sys_abs_equiv_space_groups.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/sys_abs_equiv_space_groups.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry/boost_python/geometry_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry/boost_python/geometry_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/angle_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::angle_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:75:65: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_angle_proxy") | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_misc.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for(int i=0;i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for(int i=0;i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_similarity_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:55:44: required from here 54 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | bond_similarity_proxy, rir>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 56 | "shared_bond_similarity_proxy"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:79:54: required from here 78 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | af::tiny, 2>, rbv>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 80 | "sites_array"); | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::map; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23: required from here 129 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 130 | "bond_params_table") | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25: required from here 232 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 233 | "shared_bond_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25: required from here 340 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 341 | "shared_bond_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/tuple.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/shared_wrapper_pickle.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:2: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o cctbx/geometry_restraints/bond_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:643:46: required from ‘bool cctbx::crystal::pair_asu_table::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’ 643 | int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:543:35: required from ‘cctbx::crystal::pair_asu_table& cctbx::crystal::pair_asu_table::add_pair(const scitbx::af::tiny&) [with FloatType = double; IntShiftType = int]’ 543 | bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30: required from here 16 | pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 859 | for(int i_sym=0; i_sym, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 869 | for(int i_sym=0; i_sym::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::chirality_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:75:60: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_chirality_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:12: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = dihedral_proxy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17: required from here 110 | shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65: required from here 84 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 85 | "shared_dihedral_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/geometry_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/geometry_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/motif_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/motif_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/nonbonded_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/nonbonded_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:92:25: required from here 92 | shared_w_t::wrap("shared_nonbonded_simple_proxy") | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:125:25: required from here 125 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 126 | "shared_nonbonded_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/parallelity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_fast.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = cctbx::cartesian; CubicleContentType = std::vector; FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_fast.h:77:34: required from ‘cctbx::crystal::neighbors::fast_pair_generator::fast_pair_generator(const boost::shared_ptr >&, const FloatType&, bool, const FloatType&, const FloatType&) [with FloatType = double; IntShiftType = int]’ 77 | cubicles_.i_cubicle(mappings[mi.i_seq][mi.i_sym].mapped_site())); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:80:27: required from here 80 | min_cubicle_edge); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60: required from here 82 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 83 | "shared_parallelity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/planarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/asymmetric_map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::planarity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:62:23: required from here 62 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 63 | "shared_planarity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/bcr/bcr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/grid_tags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/gridding.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/misc.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/peak_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/structure_factors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/masks/boost_python/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/math/time_trigonometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/merging/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/amplitude_normalisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/change_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/change_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/expand_to_p1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/expand_to_p1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/f_calc_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/lookup_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/lookup_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/merge_equivalents.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/miller_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/phase_integrator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_transfer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/phase_transfer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/randomize_amplitude_and_phase.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/randomize_amplitude_and_phase.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/slices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/slices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/multipolar/aspherical_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/multipolar/aspherical_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/brick.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/brick.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/change_of_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/change_of_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/phase_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/phase_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/search_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/search_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sgtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/sgtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tensors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/asu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/symmetry_search/boost_python/symmetry_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/symmetry_search/boost_python/symmetry_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lm g++ -o cctbx/translation_search/boost_python/fast_nv1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/fast_nv1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/fast_terms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/symmetry_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/translation_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/boost_python/uctbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/determine_unit_cell/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_SINGLEFILE_NCDIST -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/determine_unit_cell/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/conversions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/conversions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/curvatures_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/curvatures_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/each_hkl_gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/extinction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/extinction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/curvatures_simple.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/curvatures_simple.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/f_model_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/f_model_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/fast_gradients.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/fast_gradients.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/gradient_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/gradient_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/fast_gradients.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/fast_gradients.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data cctbx::xray::f_model_core_data::f_model_core_data::select(const scitbx::af::const_ref&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32: required from here 174 | .def("select", &w_t::select) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 732 | CCTBX_ASSERT( iselection[ii]::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/grouped_data.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (long int ii=0;ii::r_abs() [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31: required from here 69 | .def("r_abs", &w_t::r_abs) | ^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 271 | for (long int ii=0;ii cctbx::xray::grouped_data::merger::combine_obs(long int) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:258:24: required from ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’ 258 | tmp_result = combine_obs( ii ); | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:213:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int ii=1;ii::unmerged_data(scitbx::af::const_ref >, scitbx::af::const_ref >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::unmerged_data; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<4>::apply::execute(PyObject*, t0, t1, t2, t3) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; W = cctbx::xray::grouped_data::unmerged_data; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:27:15: required from here 26 | class_("unmerged_data", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 | scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | bool const& | ~~~~~~~~~~~ 31 | > | ~ 32 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 33 | arg("asu_hkl"), | ~~~~~~~~~~~~~~~ 34 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 35 | arg("anomalous_flag") ))) | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:54:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for (int ii=0; ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:67:11: note: in expansion of macro ‘CCTBX_ASSERT’ 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::merger::merger(scitbx::af::const_ref >, scitbx::af::const_ref, scitbx::af::const_ref, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::merger; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref&; t2 = const scitbx::af::const_ref&; t3 = const cctbx::sgtbx::space_group&; t4 = const bool&; t5 = const cctbx::uctbx::unit_cell&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; W = cctbx::xray::grouped_data::merger; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:54:15: required from here 53 | class_("merger", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 | bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 | cctbx::uctbx::unit_cell const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 | > | ~ 61 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 62 | arg("i_obs"), | ~~~~~~~~~~~~~ 63 | arg("s_obs"), | ~~~~~~~~~~~~~ 64 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 65 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 66 | arg("unit_cell") | ~~~~~~~~~~~~~~~~ 67 | ))) | ~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:151:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 151 | for (int ii=0;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int ii=0; ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sampling_base.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sampling_base.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h: In instantiation of ‘void cctbx::xray::parameter_map::init_scatterer_part(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h:54:7: required from ‘cctbx::xray::parameter_map::parameter_map(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’ 54 | init_scatterer_part(scatterers); | ^~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0) [with A0 = boost::python::objects::reference_to_value, scitbx::af::trivial_accessor>&>; Value = cctbx::xray::parameter_map >; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<1>::apply::execute(PyObject*, t0) [with Holder = boost::python::objects::value_holder > >; ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; PyObject = _object; t0 = const scitbx::af::const_ref, scitbx::af::trivial_accessor>&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; Arity = boost::mpl::size, scitbx::af::trivial_accessor>&> >; Holder = boost::python::objects::value_holder > >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = cctbx::xray::parameter_map >; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:46:11: required from ‘static void cctbx::xray::boost_python::parameter_map_wrapper::wrap(const char*) [with XRayScattererType = cctbx::xray::scatterer<>]’ 45 | class_("parameter_map", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 | .def(init const &>(( | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 | arg("scatterers")))) | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:60:50: required from here 60 | parameter_map_wrapper >::wrap("parameter_map"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) { | ~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sampling_base.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54: required from here 349 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55: required from here 353 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44: required from here 140 | class_ wrapper = scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | scatterer_flags, | ~~~~~~~~~~~~~~~~ 142 | return_internal_reference<> >::wrap("shared_scatterer_flags"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/sigmaa.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sigmaa.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 49 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 55 | std::auto_ptr self(new w_t); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sigmaa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sigmaa.cpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/structure_factors_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/structure_factors_direct.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/structure_factors_simple.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/xray_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/observations/boost_python/observations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:91:77: required from here 91 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:92:78: required from here 92 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared cctbx::xray::twin_targets::twin_completion::get_free_model_selection(scitbx::af::const_ref >, const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:42:50: required from here 42 | .def("get_free_model_selection", &w_t::get_free_model_selection) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:128:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 128 | CCTBX_ASSERT( index < flags.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:128:11: note: in expansion of macro ‘CCTBX_ASSERT’ 128 | CCTBX_ASSERT( index < flags.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:182:39: required from here 182 | .def("r_intensity_abs", &w_t::r_intensity_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:559:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:559:6: note: in expansion of macro ‘CCTBX_ASSERT’ 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:560:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:560:6: note: in expansion of macro ‘CCTBX_ASSERT’ 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:561:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:561:6: note: in expansion of macro ‘CCTBX_ASSERT’ 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:189:38: required from here 189 | .def("r_intensity_sq", &w_t::r_intensity_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:604:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:604:6: note: in expansion of macro ‘CCTBX_ASSERT’ 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:605:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:605:6: note: in expansion of macro ‘CCTBX_ASSERT’ 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:606:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:606:6: note: in expansion of macro ‘CCTBX_ASSERT’ 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:196:39: required from here 196 | .def("r_amplitude_abs", &w_t::r_amplitude_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:649:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:649:6: note: in expansion of macro ‘CCTBX_ASSERT’ 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:650:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:650:6: note: in expansion of macro ‘CCTBX_ASSERT’ 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:651:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:651:6: note: in expansion of macro ‘CCTBX_ASSERT’ 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:203:38: required from here 203 | .def("r_amplitude_sq", &w_t::r_amplitude_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:697:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:697:6: note: in expansion of macro ‘CCTBX_ASSERT’ 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:698:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:698:6: note: in expansion of macro ‘CCTBX_ASSERT’ 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:699:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:699:6: note: in expansion of macro ‘CCTBX_ASSERT’ 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:263:45: required from here 263 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:997:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:997:19: note: in expansion of macro ‘CCTBX_ASSERT’ 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1003:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1003:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1006:41: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1006:13: note: in expansion of macro ‘CCTBX_ASSERT’ 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1010:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1010:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:275:45: required from here 275 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:936:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:936:17: note: in expansion of macro ‘CCTBX_ASSERT’ 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:942:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:942:19: note: in expansion of macro ‘CCTBX_ASSERT’ 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:945:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:945:17: note: in expansion of macro ‘CCTBX_ASSERT’ 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:948:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’ 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values::hemihedral_r_values(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value&>; Value = cctbx::xray::twin_targets::hemihedral_r_values; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<5>::apply::execute(PyObject*, t0, t1, t2, t3, t4) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&; t4 = const scitbx::mat3&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; W = cctbx::xray::twin_targets::hemihedral_r_values; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:169:13: required from here 168 | class_("hemihedral_r_values", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | .def(init< | ~~~~^~~~~~ 170 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 1 obs indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 2 calc indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | sgtbx::space_group const&, // 3 space group | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | bool const&, // 4 anomalous flag | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | scitbx::mat3 const& // 5 twin law | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 | > | ~ 176 | ((arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~ 177 | arg("hkl_calc"), | ~~~~~~~~~~~~~~~~ 178 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 179 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 180 | arg("twin_law") | ~~~~~~~~~~~~~~~ 181 | ))) | ~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 544 | for (long ii=0;ii::refine(const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/quadrature.h:523:14: required from ‘scitbx::math::quadrature::gauss_legendre_engine::gauss_legendre_engine(const int&) [with FloatType = double]’ 523 | x = refine( start_guess ); | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1070:68: required from ‘cctbx::xray::twin_targets::single_twin_likelihood::single_twin_likelihood(const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const bool&, const bool&, const FloatType&, const FloatType&, const FloatType&, const int&) [with FloatType = double]’ 1070 | scitbx::math::quadrature::gauss_legendre_engine tmp_gle(n_quad_); | ^~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8, A9, A10, A11, A12, A13) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; A9 = boost::python::objects::reference_to_value; A10 = boost::python::objects::reference_to_value; A11 = boost::python::objects::reference_to_value; A12 = boost::python::objects::reference_to_value; A13 = boost::python::objects::reference_to_value; Value = cctbx::xray::twin_targets::single_twin_likelihood; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<14>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8, t9, t10, t11, t12, t13) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector14; PyObject = _object; t0 = const double&; t1 = const double&; t2 = const double&; t3 = const double&; t4 = const double&; t5 = const double&; t6 = const double&; t7 = const double&; t8 = const bool&; t9 = const bool&; t10 = const double&; t11 = const double&; t12 = const double&; t13 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector14; NArgs = boost::mpl::size >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init; W = cctbx::xray::twin_targets::single_twin_likelihood; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:343:14: required from here 342 | class_("single_twin_likelihood", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 | .def(init< | ~~~~^~~~~~ 344 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 | bool const&, bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | double const&, int const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 | > | ~ 352 | ((arg("i_obs1"), arg("s_obs1"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | arg("i_obs2"), arg("s_obs2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 | arg("f_calc1"), arg("f_calc2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 | arg("eps1"), arg("eps2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 | arg("centric1"),arg("centric2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 | arg("alpha"), arg("beta"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 | arg("twin_fraction"), arg("n_quad") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 | )) | ~~ 360 | ) | ~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o cma_es/cma_es_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cma_es/cma_es_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:124:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 124 | while ((j < packed_sz) && ((values - original) < values_sz)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘void dxtbx::boost_python::rod_TY6_decompress(int*, const char*, const char*, int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:204:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 204 | for (size_t iy = 0; iy < slow; iy++) { | ~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:225:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 225 | for (int k = 0; k < nblock; k++) { | ~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:251:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 251 | for (int j = 0; j < nbit; j++) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:258:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 258 | for (int j = 0; j < BLOCKSIZE; j++) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:279:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 279 | for (int i = 0; i < nrest; i++) { | ~~^~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 184 | DXTBX_ASSERT(nn == (slow * fast)); | ~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’ 184 | DXTBX_ASSERT(nn == (slow * fast)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa >&, scitbx::af::versa >&, const scitbx::vec2&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, double, double, const scitbx::vec2&, const scitbx::vec2&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 219 | for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 220 | for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) { g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = bool; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = signed char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = float; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = double; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 140 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 168 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = long unsigned int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 193 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 115 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:24, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:27: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration 10 | typedef struct cbf_handle_struct; | ^~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:30: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:648:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 648 | if (data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::Image dxtbx::ImageSet::get_raw_data_as_double(std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1116:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1116 | if (double_raw_data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1203:12: note: by ‘dxtbx::ImageSet dxtbx::ImageGrid::partial_set(std::size_t, std::size_t) const’ 1203 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1139:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1139:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1153:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1153:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1474:12: note: by ‘dxtbx::ImageSet dxtbx::ImageSequence::partial_set(std::size_t, std::size_t) const’ 1474 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1238:23: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1238 | if (data.size() != scan->get_num_images()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1277:26: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1277 | if (indices.size() != scan->get_num_images()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘void dxtbx::ImageSequence::set_scan(const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1399:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1399 | if (scan->get_num_images() != size()) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1415:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1415:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:469:56: required from here 469 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:471:55: required from here 471 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:473:53: required from here 473 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::BeamBase; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:249:56: required from here 249 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 250 | obj, | ~~~~ 251 | boost::python::extract(models[0])(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 | &ImageSetData::set_beam); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Detector; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:253:56: required from here 253 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | obj, | ~~~~ 255 | boost::python::extract(models[1]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | &ImageSetData::set_detector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Goniometer; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:257:58: required from here 257 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 258 | obj, | ~~~~ 259 | boost::python::extract(models[2]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 | &ImageSetData::set_goniometer); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Scan; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:261:52: required from here 261 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | obj, | ~~~~ 263 | boost::python::extract(models[3]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 | &ImageSetData::set_scan); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = bool]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = int]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = double]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 209 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 219 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable] 308 | PolychromaticBeam &beam = boost::python::extract(obj)(); | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 119 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 129 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 141 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’ 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’ 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 100 | for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 124 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 134 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image&, const dxtbx::format::Image&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 158 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 168 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 228 | for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:19: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment_list.h:23, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment_list.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 30 | for (std::size_t i = 0; i < boost::python::len(items); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 193 | for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) { | ~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/model_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 79 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 105 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In static member function ‘static void dxtbx::model::boost_python::ScanPickleSuite::setstate(dxtbx::model::Scan&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:41: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:7: note: in expansion of macro ‘DXTBX_ASSERT’ 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::dict dxtbx::model::boost_python::MaptoPythonDict(dxtbx::model::ExpImgRangeMap)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:187:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | for (int k = 0; k < val.size(); ++k) { | ~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:374:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 374 | for (int k = 0; k < ranges.size(); ++k) { | ~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:24: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T* dxtbx::af::flex_table_suite::make_flex_table(boost::python::list) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1233:42: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:416:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 416 | for (std::size_t i = 0; i < len(columns); ++i) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::setitem_row(T&, typename T::size_type, boost::python::dict) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; typename T::size_type = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1252:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:525:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 525 | for (std::size_t i = 0; i < len(row); ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T dxtbx::af::flex_table_suite::select_cols_tuple(const T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1265:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:747:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 747 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::set_selected_cols_tuple(T&, boost::python::tuple, const T&) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1269:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:838:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 838 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::del_selected_cols_tuple(T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1273:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1270 | .def("del_selected", &del_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1271 | .def("del_selected", &del_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1272 | .def("del_selected", &del_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1273 | .def("del_selected", &del_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:890:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 890 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf Create symlinks for: 'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1' g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5 g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/spectrum.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/str_ref.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/format.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 24 | TBXX_ASSERT(stop <= len_code); | ~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 71 | if (i < code_stop) { | ~~^~~~~~~~~~~ g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_10x20.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_8x13.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_9x15.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/fonts_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ In file included from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11: /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/gl_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_08_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_09_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_10_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_11_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_12_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_13_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_14_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_15_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/glu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/quadrics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/util_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/util_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/viewer_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 213 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 215 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 216 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 278 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 280 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 281 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/cif/boost_python/cif_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/bruker.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/bruker.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/bruker_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/bruker_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/detectors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/detectors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/image_divider.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/image_divider.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/dsn6/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/dsn6/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/dtrek_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/misc/boost_python/dtrek_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/scalepack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/misc/boost_python/scalepack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/batch_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp:78:60: required from here 78 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 79 | "shared_batch"); | ~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref&, const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’ 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::column; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp:76:60: required from here 76 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 77 | "shared_column"); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/dataset.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/object.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp:42:60: required from here 42 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 43 | "shared_crystal"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/sym_equiv.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:433:5: note: in expansion of macro ‘IOTBX_ASSERT’ 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:435:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 435 | for(int i_refl=0;i_refl iotbx::mtz::object::extract_integers(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:624:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 624 | for(int i=0;i iotbx::mtz::object::extract_reals(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 684 | for(int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset_bpl.cpp:43:60: required from here 43 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 44 | "shared_dataset"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/pdb/atom_selection.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/atom_selection.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/atom_selection.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/common_residue_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/common_residue_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/construct_hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/construct_hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/construct_hierarchy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:242:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 242 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp(const scitbx::af::const_ref&, int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:248:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 248 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:257:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 257 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp_for_occupancy_groups_simple(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:261:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 84 | std::auto_ptr, | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/function/function_base.hpp:28, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:87:36: required from here 87 | class_ wa = wat::wrap("af_shared_atom"); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom_with_labels; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:91:44: required from here 91 | class_ wawl = wawl_t::wrap("af_shared_atom_with_labels"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_ext.cpp:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4444, from /usr/include/c++/15/string:56, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘std::string iotbx::pdb::hierarchy::atom::format_atom_record(iotbx::pdb::hierarchy::atom_label_columns_formatter*, const char*) const’ at /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp:859:22: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: warning: ‘int __builtin___snprintf_chk(char*, long unsigned int, int, long unsigned int, const char*, ...)’ specified bound 640 exceeds destination size 81 [-Wstringop-overflow=] 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘std::string iotbx::pdb::hierarchy::atom::format_atom_record(iotbx::pdb::hierarchy::atom_label_columns_formatter*, const char*) const’ at /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp:869:20: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: warning: ‘int __builtin___snprintf_chk(char*, long unsigned int, int, long unsigned int, const char*, ...)’ specified bound 640 exceeds destination size 81 [-Wstringop-overflow=] 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘std::string iotbx::pdb::hierarchy::atom::format_atom_record(iotbx::pdb::hierarchy::atom_label_columns_formatter*, const char*) const’ at /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp:877:20: /usr/include/riscv64-linux-gnu/bits/stdio2.h:68:35: warning: ‘int __builtin___snprintf_chk(char*, long unsigned int, int, long unsigned int, const char*, ...)’ specified bound 640 exceeds destination size 75 [-Wstringop-overflow=] 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_select.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_select.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_write.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_c.c g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_cpp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable iotbx/pdb/hybrid_36_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from iotbx/pdb/hybrid_36_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/file_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_write.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/overall_counts.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/overall_counts.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/write_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 42 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 43 | "Failure writing to file: \"" + file_name + "\""); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’ g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/shelx/shelx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/wildcard_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/boost_python/xplor_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure_bpl.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lann-cctbx Create symlinks for: 'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1' g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so.0'->'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1' g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1' g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1' g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/bin/ld: boost_adaptbx/meta_ext.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x36): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x4a): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: boost_adaptbx/meta_ext.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x7e): warning: fegetexcept is not implemented and will always fail Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python313 -lm -lhdf5 Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1' Create symlinks for: 'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1' g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm -lccp4c Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1' g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/utils.cpp Create symlinks for: 'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/slice.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1' g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1' g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf Create symlinks for: 'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1' g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1' g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1' g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1' g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif/cifParser.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1' g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif/cifLexer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1' g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1' g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1' g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1' g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lantlr3c Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1' g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1' g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1' g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1' g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1' g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1' g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1' g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1' g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1' g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1' g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1' g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1' g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1' g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1' g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1' g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1' g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1' g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1' g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1' g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1' g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1' g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1' g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1' g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1' g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1' g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1' g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1' g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1' g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1' g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1' g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/distl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/hough.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/distl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/spotfilter.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/atom_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/decompose.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/dps_core.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lomptbx -lm Create symlinks for: 'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1' g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lann-cctbx -lomptbx -lm Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1' g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/directional_fft.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lm Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1' g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/ewald_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/slatec/lib_c.c g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1' g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lcctbx -lm Create symlinks for: 'lib/librstbx.so.0.0.1' 'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1' 'lib/librstbx.so'->'lib/librstbx.so.0.0.1' g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so.0'->'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1' g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1' g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/alignment/alignment_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/bulk_solvent_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1' g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/bulk_solvent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/secondary_structure/dssp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/den.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp:12: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::den::den_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp:53:78: required from here 53 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 54 | "shared_den_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/dynamics/dynamics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1' g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/dynamics/dynamics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/f_model/f_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/asa_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/clash_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/primitive_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/object_manager.hpp:8, from /usr/include/boost/python/extract.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' g++ -o mmtbx/hydrogens/hydrogens_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/hydrogens/hydrogens_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' g++ -o mmtbx/masks/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/max_lik/max_lik_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/max_lik/max_lik.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' g++ -o mmtbx/bulk_solvent/mosaic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/mosaic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1' g++ -o mmtbx/ncs/cartesian_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/ncs/cartesian_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/ncs/tncs_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1' g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/pair_interaction/interaction_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1' g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/boost_python/probe_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' g++ -o mmtbx/probe/Scoring.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/Scoring.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1' g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/DotSpheres.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/SpatialQuery.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o ranlib probe/lib/libprobelib.a g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/PositionReturn.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35: required from here 314 | r = target_phi_psi(general_table, sites_cart, proxy);} | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 269 | for(int i=0; i, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 284 | for(int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/format/parsing.hpp:21, from /usr/include/boost/format.hpp:50, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75: required from here 52 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 53 | "shared_phi_psi_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/InteractionGraph.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1' g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/Optimizers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/rotamer/fit_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41: required from here 80 | cctbx::geometry_restraints::shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25: required from here 61 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 62 | "shared_reference_coordinate_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/rsr/rsr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o ranlib reduce/lib/libreduce2lib.a g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/scaling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/twinning_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Lreduce/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/reduce/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1' g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/relative_scaling_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1' g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/outlier_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/secondary_structure/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/decompose_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/tls_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/optimise_amplitudes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1' g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/utils/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/validation/ramachandran/rama_eval_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1' g++ -o omptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1' g++ -o rstbx/array_family/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/array_family/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/array_family/flex_rstbx_arrays.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1' g++ -o rstbx/bandpass/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bandpass/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/src -Irstbx/bandpass/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/detector_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i < tiles.size()/4; ++i){ | ~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h: In member function ‘bool rstbx::bandpass::active_area_filter::operator()(rstbx::bandpass::vec3, const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:126:39: warning: comparison of integer expressions of different signedness: ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ~~~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:126:9: note: in expansion of macro ‘SCITBX_ASSERT’ 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h: In member function ‘void rstbx::bandpass::subpixel_joint_model::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h:26:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 26 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared rstbx::bandpass::use_case_bp3::selected_partialities() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:152:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow_force()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:462:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 462 | for ( int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectangles(rstbx::bandpass::vec3ref)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:477:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 477 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectregions(rstbx::bandpass::vec3ref, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:511:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 511 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::enclosed_pixels() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:543:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 543 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hi_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:752:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 752 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_lo_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:763:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 763 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:774:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 774 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions_labelit_format() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:787:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 787 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hkls() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:802:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 802 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::restricted_to_active_areas(scitbx::af::shared, scitbx::af::shared >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:815:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 815 | for (int idx = 0; idx < active_areas.size(); idx+=4){ | ~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:828:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 828 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ //DEPRECATED | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In function ‘scitbx::af::shared > rstbx::bandpass::ext::use_case_bp2_picture_fast_slow(scitbx::af::shared >, const cctbx::crystal_orientation&, const scitbx::vec3&, const double&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const double&, const scitbx::vec3&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 933 | for (int idx = 0; idx < indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:616:87: required from here 616 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = unlimited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:620:78: required from here 620 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/scope.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:4: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.h:3, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = cctbx::miller::index<>; MillerConversionPolicy = rstbx::diffraction::fastbragg::integer_miller_index_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:138:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 138 | .def("sweep_over_detector_integer_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | rstbx::diffraction::fastbragg::miller_t, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 | rstbx::diffraction::fastbragg::integer_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o rstbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1' g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/real_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/directional_fft.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/dps_core.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.h:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | for (int i=0; i < x_data.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::pdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::cdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::gradients(scitbx::af::shared, const int&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 135 | for (int i = 0; i < gradients.size(); ++i){ | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/integration_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/libdistl.h:81, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/distl.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/integration_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/scanbox.h: In member function ‘Distl::interval_list Distl::scanbox_tiling_explicit::generate_defined_x_tiles(const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int tile = 0 ; tile < tile_count; ++tile){ | ~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 222 | for (int i=0; i < mask.size(); i+=2){ | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::positional_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 273 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int p=0; p >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:310:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 310 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 320 | for (int p=0; p > rstbx::integration::simple_integration::safe_background(const scitbx::af::flex_int&, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:366:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 366 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 378 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 395 | for (int i=0; i >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 495 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 550 | for (int i=0; i >, scitbx::af::shared >, scitbx::af::shared >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:575:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int k=0; k::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 638 | for (int k=0; k'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1' g++ -o rstbx/simage/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/simage/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/src -Irstbx/simage/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1' g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp: In member function ‘rstbx::simage::image_simple& rstbx::simage::image_simple::compute(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const scitbx::mat3&, double, double, int, double, scitbx::vec2, scitbx::vec2, unsigned int, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 144 | for(int i=0;i<=point_spread;i++) { | ~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 148 | for(int j=0;j<=point_spread;j++) { | ~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | TBXX_ASSERT(bp::len(rgb_images[j]) == img_size); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int x = 0; x < indices_all.size(); ++x){ | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa > rstbx::xfel1::raw_diffraction(scitbx::af::shared, scitbx::af::versa >, const size_t&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 178 | for (int mcount=0; mcount::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | for (int isel = 0; isel < selected.size(); ++isel){ | ~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1' g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so.0'->'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_grid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 367 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:375:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 375 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 383 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h: In instantiation of ‘scitbx::af::shared scitbx::af::reindexing_array(std::size_t, const const_ref&) [with IntType = int; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:544:7: required from here 544 | reindexing_array, | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:156:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 156 | SCITBX_ASSERT(iselection[i] < selectee_size); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’ 156 | SCITBX_ASSERT(iselection[i] < selectee_size); | ^~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/c_grid_flex_conversions.h:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:84:46: required from here 84 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:85:45: required from here 85 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:86:36: required from here 86 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:87:36: required from here 87 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:88:36: required from here 88 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:89:36: required from here 89 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:90:37: required from here 90 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:91:39: required from here 91 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:92:39: required from here 92 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:93:39: required from here 93 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:94:39: required from here 94 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:95:39: required from here 95 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:96:53: required from here 96 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:97:53: required from here 97 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:98:53: required from here 98 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:100:50: required from here 100 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:101:51: required from here 101 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:102:55: required from here 102 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:103:55: required from here 103 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:104:55: required from here 104 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:105:58: required from here 105 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:106:53: required from here 106 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:107:53: required from here 107 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:108:53: required from here 108 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:110:54: required from here 110 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:112:46: required from here 112 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:113:46: required from here 113 | tuple_mapping_fixed_size >(); // scitbx/math/golay.h | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:115:49: required from here 115 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:117:50: required from here 117 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:118:50: required from here 118 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:119:50: required from here 119 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:120:50: required from here 120 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:122:53: required from here 122 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:123:53: required from here 123 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:124:53: required from here 124 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:127:51: required from here 127 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:128:52: required from here 128 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:129:42: required from here 129 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:130:42: required from here 130 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:131:45: required from here 131 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:132:63: required from here 132 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:133:45: required from here 133 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:134:49: required from here 134 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:135:51: required from here 135 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:136:52: required from here 136 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:137:42: required from here 137 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:138:42: required from here 138 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:139:45: required from here 139 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:140:45: required from here 140 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:141:49: required from here 141 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:143:60: required from here 143 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:144:60: required from here 144 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:146:54: required from here 146 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:147:54: required from here 147 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:148:54: required from here 148 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:149:54: required from here 149 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:150:54: required from here 150 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:151:54: required from here 151 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:153:64: required from here 153 | tuple_mapping_fixed_capacity(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 3>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:154:56: required from here 154 | tuple_mapping_fixed_capacity, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 2>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:155:56: required from here 155 | tuple_mapping_fixed_capacity, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 6>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:156:59: required from here 156 | tuple_mapping_fixed_capacity, 6> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 7>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:157:59: required from here 157 | tuple_mapping_fixed_capacity, 7> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:158:59: required from here 158 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:159:59: required from here 159 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:429:8: required from here 429 | def("first_index", f_w::first_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:430:8: required from here 430 | def("last_index", f_w::last_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 206 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 452 | for (int i=1; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 454 | if (i != indices.size() - 1) o << ","; | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26: required from here 365 | return matrix::norm_1(self); | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (int i=0; i scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8: required from here 536 | def( | ~~~^ 537 | "double_from_byte_str", | ~~~~~~~~~~~~~~~~~~~~~~~ 538 | shared_from_byte_str, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 | (arg("byte_str"))); | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74: required from here 119 | double (*matrix_norm_1)(const_ref const &) = matrix::norm_1; | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 32 | for (int i=0; i >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 | .def("matrix_norm_frobenius", matrix::norm_frobenius) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]); | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 885 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 886 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sort.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_weighted_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics scitbx::math::median_functor::dispersion(const scitbx::af::ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26: required from ‘static scitbx::math::median_statistics scitbx::af::boost_python::median_functor_wrapper::dispersion(wt&, const scitbx::af::const_ref&) [with FloatType = double; wt = scitbx::math::median_functor]’ 31 | return O.dispersion(af::make_ref(buffer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13: required from ‘static void scitbx::af::boost_python::median_functor_wrapper::wrap(const char*) [with FloatType = double]’ 36 | class_(name, no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | .def(init<>()) | ~~~~~~~~~~~~~~ 38 | .def(init(arg("seed"))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | .def("__call__", call, arg("data")) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | .def("dispersion", dispersion, arg("data")) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41: required from here 63 | median_functor_wrapper::wrap("median_functor"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i=0; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp: In function ‘scitbx::af::flex >::type* scitbx::af::{anonymous}::array_indices_as_double_from_array_focus_dimensions(const scitbx::vec2&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:128:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 128 | for(std::size_t i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3*; _Size = long unsigned int; _Tp = scitbx::sym_mat3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec2; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2*; _Size = long unsigned int; _Tp = scitbx::vec2]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/loops.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/show_sizes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::mat3*; _Size = long unsigned int; _Tp = scitbx::mat3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::af::tiny; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53: required from here 40 | shared_wrapper, rir>::wrap("stl_vector_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51: required from here 41 | shared_wrapper, rir>::wrap("stl_vector_double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50: required from here 42 | shared_wrapper, rir>::wrap("stl_set_unsigned") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:48:37: required from here 48 | shared_wrapper >::wrap("mat3_int"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:49:40: required from here 49 | shared_wrapper >::wrap("tiny_int_3"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:50:40: required from here 50 | shared_wrapper >::wrap("tiny_int_4"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:51:40: required from here 51 | shared_wrapper >::wrap("tiny_int_2"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/gridding.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o lib/scitbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_flex_ext.so.0 scitbx/array_family/boost_python/flex_ext.o scitbx/array_family/boost_python/flex_grid.o scitbx/array_family/boost_python/flex_bool.o scitbx/array_family/boost_python/flex_size_t.o scitbx/array_family/boost_python/flex_int.o scitbx/array_family/boost_python/flex_float.o scitbx/array_family/boost_python/flex_double.o scitbx/array_family/boost_python/flex_double_matrix.o scitbx/array_family/boost_python/flex_complex_double.o scitbx/array_family/boost_python/flex_std_string.o scitbx/array_family/boost_python/flex_random.o scitbx/array_family/boost_python/flex_sort.o scitbx/array_family/boost_python/flex_histogram.o scitbx/array_family/boost_python/flex_weighted_histogram.o scitbx/array_family/boost_python/flex_mean_and_variance.o scitbx/array_family/boost_python/flex_median.o scitbx/array_family/boost_python/flex_linear_interpolation.o scitbx/array_family/boost_python/flex_vec3_double.o scitbx/array_family/boost_python/flex_vec2_double.o scitbx/array_family/boost_python/flex_vec3_int.o scitbx/array_family/boost_python/flex_sym_mat3_double.o scitbx/array_family/boost_python/flex_mat3_double.o scitbx/array_family/boost_python/flex_tiny_size_t_2.o scitbx/array_family/boost_python/loops.o scitbx/array_family/boost_python/show_sizes.o scitbx/array_family/boost_python/numpy_bridge.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map > scitbx::cubicle_neighbors::neighbors_of(const scitbx::af::const_ref >&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:23:36: required from here 23 | .def("neighbors_of", &w_t::neighbors_of, ( | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:61:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 61 | if (i_cub[0] < 0 || i_cub[0] >= n_cubicles[0]) continue; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:63:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 63 | if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 65 | if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3; CubicleContentType = std::vector::cubicle_site, std::allocator::cubicle_site> >; FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:43:30: required from ‘scitbx::cubicle_neighbors::cubicle_neighbors(const scitbx::af::const_ref >&, const FloatType&, const FloatType&) [with FloatType = double]’ 43 | cubicles_.i_cubicle(main_sites_cart[i_seq])); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; Value = scitbx::cubicle_neighbors<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<3>::apply::execute(PyObject*, t0, t1, t2) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector3 >&, const double&, const double&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const double&; t2 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector3 >&, const double&, const double&>; Arity = boost::mpl::size >&, const double&, const double&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const double&, const double&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const double&, const double&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const double&, const double&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const double&, const double&>; W = scitbx::cubicle_neighbors<>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:16:13: required from here 15 | class_("cubicle_neighbors", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 16 | .def(init< | ~~~~^~~~~~ 17 | af::const_ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 18 | double const&, | ~~~~~~~~~~~~~~ 19 | double const&>(( | ~~~~~~~~~~~~~~~~ 20 | arg("main_sites_cart"), | ~~~~~~~~~~~~~~~~~~~~~~~ 21 | arg("cubicle_edge"), | ~~~~~~~~~~~~~~~~~~~~ 22 | arg("epsilon")=1.e-6))) | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ /usr/bin/ld: scitbx/array_family/boost_python/numpy_bridge.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x53e): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x552): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: scitbx/array_family/boost_python/numpy_bridge.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x586): warning: fegetexcept is not implemented and will always fail g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/glmtbx/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1' g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/graphics_utils/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1' g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/iso_surface/iso_surface_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1' g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgs/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1' g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/lbfgs_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1' g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/linalg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::minimizer(const int&, const int&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value >; A3 = boost::python::objects::reference_to_value >; A4 = boost::python::objects::reference_to_value >; A5 = bool; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; Value = scitbx::lbfgsb::minimizer; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<9>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; PyObject = _object; t0 = const int&; t1 = const int&; t2 = scitbx::af::shared; t3 = scitbx::af::shared; t4 = scitbx::af::shared; t5 = bool; t6 = const double&; t7 = const double&; t8 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; Arity = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, not_specified, not_specified, not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = scitbx::lbfgsb::minimizer; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:20:13: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 19 | class_("minimizer", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 20 | .def(init, | ~~~~~~~~~~~~~~~~~~~~~~ 23 | af::shared, | ~~~~~~~~~~~~~~~~~~~~~~ 24 | af::shared, | ~~~~~~~~~~~~~~~~ 25 | bool, | ~~~~~ 26 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 27 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 28 | int const&>()) | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:118:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 118 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:118:9: note: in expansion of macro ‘SCITBX_ASSERT’ 118 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:119:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 119 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:119:9: note: in expansion of macro ‘SCITBX_ASSERT’ 119 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:120:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 120 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’ 120 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/eigensystem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp: In function ‘int scitbx::lapack::boost_python::dsyev_wrapper(const std::string&, const std::string&, const scitbx::af::ref >&, const scitbx::af::ref&, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 246 | SCITBX_ASSERT(w.size() == n); | ~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’ 246 | SCITBX_ASSERT(w.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lstbx/boost_python/normal_equations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/basic_statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/bin/ld: scitbx/linalg/boost_python/cholesky.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x448): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x45c): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: scitbx/linalg/boost_python/cholesky.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x490): warning: fegetexcept is not implemented and will always fail Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1' g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/golay.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/bin/ld: scitbx/lstbx/boost_python/normal_equations.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x642): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x656): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: scitbx/lstbx/boost_python/normal_equations.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x68a): warning: fegetexcept is not implemented and will always fail g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/row_echelon.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/chebyshev.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/icosahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/icosahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/slatec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/line_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/r3_rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/resample.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/quadrature.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/unimodular_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/halton.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/halton.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/least_squares_plane.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/least_squares_plane.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/continued_fraction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/numeric_limits.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/numeric_limits.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/exp_functions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/exp_functions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/zernike.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/2d_zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/weighted_covariance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/tetrahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/angle_derivative.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/minpack/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/raw.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h: In member function ‘void scitbx::minpack::levenberg_marquardt::process_fvec(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:80:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | SCITBX_ASSERT(fvec.size() == m); | ~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’ 80 | SCITBX_ASSERT(fvec.size() == m); | ^~~~~~~~~~~~~ g++ -o scitbx/r3_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/r3_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/random/boost_python/random_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1' g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/random/boost_python/basic_distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/rigid_body/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/vector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/vector.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rotr3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/spatial_lib.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 4]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:361:21: required from ‘scitbx::rotr3 scitbx::rigid_body::joint_lib::six_dof_aja_simplified(const scitbx::vec3&, const scitbx::af::const_ref&) [with FloatType = double]’ 361 | af::tiny qe(&q[0], &q[4]); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:24:49: required from here 24 | result = joint_lib::six_dof_aja_simplified(center_of_mass, q); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_matrix.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/spatial_lib.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:683:31: required from ‘scitbx::af::shared > scitbx::rigid_body::featherstone::system_model::inverse_dynamics(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&) [with FloatType = double]’ 683 | tau_array[ib] = af::small(f[ib].begin(), f[ib].end()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:705:21: required from ‘scitbx::af::shared scitbx::rigid_body::featherstone::system_model::inverse_dynamics_packed(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with FloatType = double]’ 705 | tau_array = inverse_dynamics( | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:120:46: required from here 120 | .def("inverse_dynamics_packed", &wt::inverse_dynamics_packed, ( | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:203:54: required from ‘scitbx::rigid_body::tardy::model::model(const boost::python::api::object&, const scitbx::af::shared >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, const ft&) [with FloatType = double; ft = double]’ 203 | featherstone::system_model(construct_bodies( | ~~~~~~~~~~~~~~~~^ 204 | sites_.const_ref(), | ~~~~~~~~~~~~~~~~~~~ 205 | masses_.const_ref(), | ~~~~~~~~~~~~~~~~~~~~ 206 | tardy_tree_.attr("cluster_manager"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | near_singular_hinges_angular_tolerance_deg_)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = scitbx::rigid_body::tardy::model<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; PyObject = _object; t0 = const boost::python::api::object&; t1 = const scitbx::af::shared >&; t2 = const scitbx::af::shared&; t3 = const boost::python::api::object&; t4 = const boost::python::api::object&; t5 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; Arity = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:344:31: required from ‘static void boost::python::detail::define_class_init_helper::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, boost::python::detail::keyword_range) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; int NDefaults = 1; boost::python::detail::keyword_range = std::pair]’ 344 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedT = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional > >; classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedVisitor = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >; W = scitbx::rigid_body::tardy::model<>; X1 = boost::python::bases >; X2 = boost::noncopyable_::noncopyable; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:151:13: required from here 146 | class_ >, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | boost::noncopyable | ~~~~~~~~~~~~~~~~~~ 149 | >("tardy_model", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .enable_pickling() | ~~~~~~~~~~~~~~~~~~ 151 | .def(init< | ~~~~^~~~~~ 152 | object const&, | ~~~~~~~~~~~~~~ 153 | af::shared > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | af::shared const&, | ~~~~~~~~~~~~~~~~~~~~~~ 155 | object const&, | ~~~~~~~~~~~~~~ 156 | object const&, | ~~~~~~~~~~~~~~ 157 | optional >(( | ~~~~~~~~~~~~~~~~~~~~~~~ 158 | arg("labels"), | ~~~~~~~~~~~~~~ 159 | arg("sites"), | ~~~~~~~~~~~~~ 160 | arg("masses"), | ~~~~~~~~~~~~~~ 161 | arg("tardy_tree"), | ~~~~~~~~~~~~~~~~~~ 162 | arg("potential_obj"), | ~~~~~~~~~~~~~~~~~~~~~ 163 | arg("near_singular_hinges_angular_tolerance_deg")=5))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:163:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 163 | SCITBX_ASSERT(body->parent < nc); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’ 163 | SCITBX_ASSERT(body->parent < nc); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:648:13: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::revolute::new_q(const scitbx::af::const_ref&) const [with FloatType = double]’ 648 | af::tiny(q.begin(), q.end()))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:643:5: required from here 643 | new_q( | ^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:45:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny&) [with FloatType = double]’ 45 | return af::tiny(coeffs, coeffs+4*3) * ft(0.5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:279:21: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::six_dof::time_step_position(const scitbx::af::const_ref&, const ft&) const [with FloatType = double; ft = double]’ 279 | rbda_eq_4_13(unit_quaternion), w_body_frame); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:271:5: required from here 271 | time_step_position( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 16]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:79:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::d_unit_quaternion_d_qe_matrix(const scitbx::af::tiny&) [with FloatType = double]’ 79 | return af::tiny(coeffs, coeffs+4*4) / n3; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:317:58: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 317 | af::tiny d = d_unit_quaternion_d_qe_matrix(qe); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:324:24: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 324 | af::small result(cn.begin(), cn.end()); | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_matrix.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/array_as_list.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:3: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/approx_equal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/lu_factorization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/sparse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o scitbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1' g++ -o scitbx/stl/set_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 52 | bp::class_ >(python_name.c_str()) | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:9:32: required from here 9 | set_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:10:35: required from here 10 | set_wrapper::wrap("stl_string"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/stl/vector_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:10:35: required from here 10 | vector_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:11:33: required from here 11 | vector_wrapper::wrap("double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:14:50: required from here 14 | vector_wrapper, rir>::wrap("set_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/wigner/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1' g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/ab_initio/ab_initio_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1' g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/array_family/af_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/least_squares_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/weighting_schemes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/least_squares.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' g++ -o smtbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/structure_factors/direct/boost_python/standard_xray.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1' g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/flex_distl_spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/bin/ld: smtbx/refinement/restraints/boost_python/origin_fixing.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x3ea): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x3fe): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: smtbx/refinement/restraints/boost_python/origin_fixing.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x432): warning: fegetexcept is not implemented and will always fail Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/bin/ld: smtbx/refinement/boost_python/least_squares.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x1164): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x1178): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: smtbx/refinement/boost_python/least_squares.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x11ac): warning: fegetexcept is not implemented and will always fail Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' g++ -o spotfinder/diffraction/geometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/diffraction/geometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/dxtbx_toolbox/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_distltbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_distltbx_ext.so.0 spotfinder/core_toolbox/boost_python/distltbx_ext.o spotfinder/diffraction/geometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1' g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1' g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/tst_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/list.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78: required from here 156 | scitbx::boost_python::container_conversions::variable_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72: required from here 160 | scitbx::boost_python::container_conversions::linked_list_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71: required from here 164 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71: required from here 168 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75: required from here 172 | scitbx::boost_python::container_conversions::fixed_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/spotfinder_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_array_family_flex_ext.so.0 spotfinder/array_family/flex_ext.o spotfinder/array_family/flex_distl_spot.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:15: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<1>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:127:11: required from here 127 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<4>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:145:11: required from here 145 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<2>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:172:11: required from here 172 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<3>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:202:11: required from here 202 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:248:11: required from here 248 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:280:11: required from here 280 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:326:11: required from here 326 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:371:11: required from here 371 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_plain_apply.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:10: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small_plain]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::small]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:621:46: required from here 621 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared_plain]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:624:48: required from here 624 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:629:42: required from here 629 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_1() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:635:64: required from here 634 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 | af::versa_plain > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:637:58: required from here 636 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 | af::versa > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/small_plain_apply.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = int; long unsigned int N = 128]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:41:17: required from ‘static void {anonymous}::array_exercise::run_1() [with ArrayType = scitbx::af::small_plain]’ 41 | ArrayType a5(a4.begin(), a4.begin()); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:28:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 28 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ Create symlinks for: 'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so.0'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_2.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_4.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_3.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_5.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_4.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_5.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_mat3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_optional_copy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 52 | for(int i=0; i::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_sym_mat3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_algebra.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_vec3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error/tst_error.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_vec3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/fftpack_timer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/test0.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable scitbx/lbfgs/sdrive_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex_3d.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/test0.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/sdrive_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgs/tst_lbfgs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lomptbx -lm /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19: required from here 102 | write_ref1(" ", x); | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11: required from here 70 | setulb( | ~~~~~~^ 71 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:82:19: required from here 82 | write_ref1(" ", wa.get1(j+1,n)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:72:11: required from here 72 | setulb( | ~~~~~~^ 73 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/math/tests/tst.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/math/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/tests/tst.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_givens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system /usr/bin/ld: scitbx/matrix/tests/tst_cholesky.o: in function `boost_adaptbx::floating_point::trap_exceptions(bool, bool, bool)': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:50:(.text+0x2a4): warning: fedisableexcept is not implemented and will always fail /usr/bin/ld: ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:51:(.text+0x2b8): warning: feenableexcept is not implemented and will always fail /usr/bin/ld: scitbx/matrix/tests/tst_cholesky.o: in function `boost_adaptbx::floating_point::is_division_by_zero_trapped()': ./.pybuild/cpython3_3.13/build_/boost_adaptbx/floating_point_exceptions.h:65:(.text+0x2ec): warning: fegetexcept is not implemented and will always fail g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/tst_base_256.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/tests/tst_sparse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-z,relro -L/usr/lib/riscv64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/riscv64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system scons: done building targets. usr+sys time: 118.73 seconds wall clock time: 59 minutes 40.83 seconds (3580.83 seconds total) iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h mv covalent_radii.h cctbx/eltbx/covalent_radii.h # cp all extensions into the python build directory # special case for an extension used during test dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/lib/*_ext.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/scitbx/array_family/boost_python/regression_test_ext.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' # cp the dxtbx pybind11 extension at the right place. dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/lib/dxtbx_flumpy.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # DOES NOT WORK, source code must be modified in order to find the expected # /usr/share/cctbx libtbx_env file during the build process make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars rm -fr -- debian/.debhelper/generated/libcctbx0/ debian/libcctbx0/ debian/tmp/ debian/.debhelper/generated/libcctbx-dev/ debian/libcctbx-dev/ debian/.debhelper/generated/python3-cctbx/ debian/python3-cctbx/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # install the cctbx python modules dh_auto_install install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx running install_lib creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_table.py to tst_scattering_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py to tst_mmtbx_refinement_wrappers_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_and_dm.py to tst_fmodel_and_dm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_7.py to tst_add_hydrogen_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_6.py to tst_add_hydrogen_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_5.py to tst_add_hydrogen_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_entry_request.py to tst_rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_entry_request.py to rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:62: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:378: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:420: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_2.py to tst_map_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_cells.py to tst_pdb_cif_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatADSCSMVCetaD.py to FormatADSCSMVCetaD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc running install_egg_info running egg_info creating cctbx.egg-info writing cctbx.egg-info/PKG-INFO writing dependency_links to cctbx.egg-info/dependency_links.txt writing requirements to cctbx.egg-info/requires.txt writing top-level names to cctbx.egg-info/top_level.txt writing manifest file 'cctbx.egg-info/SOURCES.txt' reading manifest file 'cctbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' writing manifest file 'cctbx.egg-info/SOURCES.txt' Copying cctbx.egg-info to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx-2023.12.egg-info Skipping SOURCES.txt running install_scripts # install the dxtbx python modules dh_auto_install --sourcedirectory=dxtbx install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 --dir dxtbx --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp' /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_table.py to tst_scattering_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py to tst_mmtbx_refinement_wrappers_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_and_dm.py to tst_fmodel_and_dm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_7.py to tst_add_hydrogen_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_6.py to tst_add_hydrogen_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_5.py to tst_add_hydrogen_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_entry_request.py to tst_rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_entry_request.py to rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:62: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:378: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:420: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_2.py to tst_map_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_cells.py to tst_pdb_cif_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatADSCSMVCetaD.py to FormatADSCSMVCetaD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc running install_egg_info running egg_info writing src/dxtbx.egg-info/PKG-INFO writing dependency_links to src/dxtbx.egg-info/dependency_links.txt writing entry points to src/dxtbx.egg-info/entry_points.txt writing top-level names to src/dxtbx.egg-info/top_level.txt reading manifest file 'src/dxtbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' adding license file 'AUTHORS' writing manifest file 'src/dxtbx.egg-info/SOURCES.txt' Copying src/dxtbx.egg-info to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx-3.23.0.egg-info Skipping SOURCES.txt running install_scripts Installing cxi.image2pickle script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing cxi.image_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dev.dxtbx.debug_memory script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dev.dxtbx.read_sequence script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.any2nexus script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.depends_on script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.detector_superpose script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.display_parallax_correction script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.dlsnxs2cbf script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.image2pickle script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.image_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.install_format script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.overload script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.plot_detector_models script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.print_header script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.print_matching_images script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.radial_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.saturation script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_mask_info script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_matching_formats script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_registry script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin # specific installation for the cctbx build directory dh_auto_install -- -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: debian/install-cctbx.sh -- --pyver=3.13 --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir='/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' debian/install-cctbx.sh: line 7: 0: command not found --pyver '3.13' --srcdir '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' --builddir '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_' --modules 'annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' -- Intalling CCTBX into a FHS system Modules: annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx From the source /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 build /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ To the FHS : pyver 3.13 bindir /usr/bin incdir /usr/include pkglibdir /usr/lib/cctbx/python3.13 libdir /usr/lib/riscv64-linux-gnu pythondir /usr/lib/python3.13/dist-packages Copying libtbx_env from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13 {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.seconds_since_the_epoch"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/seconds_since_the_epoch.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.remove_unused_imports"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/remove_unused_imports.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.bootstrap"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/bootstrap.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_python_dependencies"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_python_dependencies.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.install_conda"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/install_conda.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.find_pdb_mmcif_problems"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/find_pdb_mmcif_problems.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_environ_usage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_python_sys_executable"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_python_sys_executable.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_repository_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_repository_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.find_under_build"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/find_under_build.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.run_pickled_function"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/run_pickled_function.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.pdflatex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/pdflatex.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.line_count"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/line_count.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_env.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.exec"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/exec.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.make_sphinx_html"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/make_sphinx_html.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.chunk"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/chunk.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.find_in_repositories"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/find_in_repositories.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.phil"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/phil.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_all_on_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_all_on_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_date_and_time"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_date_and_time.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/prime_factors_of.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.find_files"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/find_files.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_bin_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_bin_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.bundle_as_selfx"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/bundle_as_selfx.csh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.create_installer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/create_installer.py"), 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relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="include"), 'installed': False, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'docutils', 'cbflib', 'probe', 'king', 'reduce'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib"), 'annlib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib_adaptbx"), 'boost': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost"), 'boost_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cctbx"), 'chiltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../chiltbx"), 'cma_es': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cma_es"), 'crys3d': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../crys3d"), 'dxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx"), 'fable': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../fable"), 'gltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../gltbx"), 'iotbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../iotbx"), 'libtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx"), 'mmtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx"), 'omptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../omptbx"), 'rstbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../rstbx"), 'scitbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../scitbx"), 'serialtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../serialtbx"), 'smtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../smtbx"), 'spotfinder': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../spotfinder"), 'tbxx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../tbxx"), 'ucif': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ucif"), 'wxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': False, 'path_utility': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), 'python_version_major_minor': (3, 13), 'pythonpath': [relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../.."), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost_adaptbx"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="lib"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/lib/python3.13/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/lib/python3/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/local/lib/python3.13/dist-packages")], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../..")], 'scons_dist_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr")} Saved /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13/libtbx_env env {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/libtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.13"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.seconds_since_the_epoch"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/seconds_since_the_epoch.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remove_unused_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remove_unused_imports.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_variable_names"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_variable_names.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_python"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_python.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.git_avoid_merges"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/git_avoid_merges.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.clear_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clear_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_clutter.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/check_libcpp.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.run_tests_parallel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/run_tests_parallel.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.parallel_simple"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/parallel_simple.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_build_options"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_options.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.printenv"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/printenv.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin_ends_with"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin_ends_with.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.nequal"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/nequal.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_untested"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_untested.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_full_command_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_full_command_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_unzipsfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_unzipsfx.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.gdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/gdb.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.env_run"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/env_run.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.easy_qsub"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/easy_qsub.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_windows_exe"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_windows_exe.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.sh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sh.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remove_tree"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remove_tree.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_line_count"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_line_count.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.help"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/help.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.analyse_code_comments"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/analyse_code_comments.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.clean_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clean_clutter.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.dtrace"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/dtrace.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.wait_for_file"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/wait_for_file.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_cctbx_bundle_for_installer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.extract_code_from_txt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/valgrind.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_number_of_processors.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bibtex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bibtex.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remote_processing"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remote_processing.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.scons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/scons.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin.py"), relocatable_path(anchor="/usr", relocatable="bin/sphinx.build"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sphinx_build.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_modules.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bash"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bash.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_numpy_version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_numpy_version.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_include_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_include_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_source_files_sorted_by_size"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.sge_qstat_counts"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sge_qstat_counts.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.make_dist"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/make_dist.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_tests"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_tests.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.any2unix"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/any2unix.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.show_environ_usage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.show_platform_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/show_platform_info.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.segmentation_fault"): relocatable_path(anchor="/usr", 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relocatable="lib/python3/dist-packages/annlib"), 'annlib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib_adaptbx"), 'boost': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost"), 'boost_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx"), 'chiltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/chiltbx"), 'cma_es': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cma_es"), 'crys3d': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d"), 'dxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx"), 'fable': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable"), 'gltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/gltbx"), 'iotbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx"), 'libtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx"), 'mmtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx"), 'omptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/omptbx"), 'rstbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx"), 'scitbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx"), 'serialtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/serialtbx"), 'smtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx"), 'spotfinder': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder"), 'tbxx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/tbxx"), 'ucif': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ucif"), 'wxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': True, 'path_utility': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/usr", relocatable="bin/python3.13"), 'python_version_major_minor': (3, 13), 'pythonpath': [], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages")], 'scons_dist_path': relocatable_path(anchor="/usr", relocatable=".")} building file list ... done ./ boost_adaptbx/ boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy iotbx/ iotbx/pdb/ iotbx/pdb/hybrid_36_fem scitbx/ scitbx/array_family/ scitbx/array_family/tst_accessors scitbx/array_family/tst_af_1 scitbx/array_family/tst_af_2 scitbx/array_family/tst_af_3 scitbx/array_family/tst_af_4 scitbx/array_family/tst_af_5 scitbx/array_family/tst_mat3 scitbx/array_family/tst_optional_copy scitbx/array_family/tst_rectangular_full_packed scitbx/array_family/tst_ref_matrix_facet scitbx/array_family/tst_sym_mat3 scitbx/array_family/tst_unsigned_float_arithmetic scitbx/array_family/tst_vec3 scitbx/error/ scitbx/error/tst_error scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky scitbx/matrix/tests/tst_givens scitbx/matrix/tests/tst_householder scitbx/matrix/tests/tst_svd scitbx/serialization/ scitbx/serialization/tst_base_256 smtbx/ smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens smtbx/refinement/constraints/tests/tst_reparametrisation smtbx/refinement/constraints/tests/tst_special_position sent 16,034,037 bytes received 568 bytes 32,069,210.00 bytes/sec total size is 16,022,472 speedup is 1.00 building file list ... done ./ libann_adaptor.so -> libann_adaptor.so.0.0.1 libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 libann_adaptor.so.0.0.1 libasymmetric_map.so -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0.0.1 libcbf-private.so -> libcbf-private.so.0.0.1 libcbf-private.so.0 -> libcbf-private.so.0.0.1 libcbf-private.so.0.0.1 libccp4io.so -> libccp4io.so.0.0.1 libccp4io.so.0 -> libccp4io.so.0.0.1 libccp4io.so.0.0.1 libcctbx.so -> libcctbx.so.0.0.1 libcctbx.so.0 -> libcctbx.so.0.0.1 libcctbx.so.0.0.1 libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0.0.1 libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0.0.1 libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0.0.1 libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0.0.1 libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0.0.1 libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0.0.1 libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0.0.1 libomptbx.so -> libomptbx.so.0.0.1 libomptbx.so.0 -> libomptbx.so.0.0.1 libomptbx.so.0.0.1 librstbx.so -> librstbx.so.0.0.1 librstbx.so.0 -> librstbx.so.0.0.1 librstbx.so.0.0.1 libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0.0.1 libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0.0.1 libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0.0.1 libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0.0.1 libspotfinder.so -> libspotfinder.so.0.0.1 libspotfinder.so.0 -> libspotfinder.so.0.0.1 libspotfinder.so.0.0.1 sent 57,049,278 bytes received 494 bytes 38,033,181.33 bytes/sec total size is 57,032,418 speedup is 1.00 building file list ... done annlib_adaptbx/ annlib_adaptbx/ann_adaptor.h sent 2,232 bytes received 38 bytes 4,540.00 bytes/sec total size is 2,068 speedup is 0.91 building file list ... done boost_adaptbx/ boost_adaptbx/boost_range_python.hpp boost_adaptbx/convertible.h boost_adaptbx/exporting.hpp boost_adaptbx/floating_point_exceptions.h boost_adaptbx/hash.h boost_adaptbx/iterator_range.h boost_adaptbx/optional_conversions.h boost_adaptbx/precompiled.h boost_adaptbx/python_streambuf.h boost_adaptbx/std_pair_conversion.h boost_adaptbx/std_pair_fwd.h boost_adaptbx/swig_arg.hpp boost_adaptbx/tuple_conversion.h boost_adaptbx/graph/ boost_adaptbx/graph/graph_export_adaptor.hpp boost_adaptbx/graph/graph_type.hpp boost_adaptbx/graph/maximum_clique_greedy.hpp boost_adaptbx/graph/maximum_clique_rascal.hpp boost_adaptbx/graph/vertex_map.hpp boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy.h sent 73,888 bytes received 386 bytes 148,548.00 bytes/sec total size is 72,301 speedup is 0.97 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/basic.h cbflib_adaptbx/detectors/buffer_based_service.h cbflib_adaptbx/detectors/cbf_adaptor.h cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h cbflib_adaptbx/detectors/mar_adaptor.h cbflib_adaptbx/detectors/boost_python/ cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h cbflib_adaptbx/detectors/boost_python/general_cbf_write.h sent 22,299 bytes received 158 bytes 44,914.00 bytes/sec total size is 21,627 speedup is 0.96 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/ccp4_ccplib_fem.hpp ccp4io_adaptbx/ccp4_diskio_fem.hpp ccp4io_adaptbx/ccp4_fftlib_fem.hpp ccp4io_adaptbx/ccp4_library_fem.hpp ccp4io_adaptbx/ccp4_maplib_fem.hpp ccp4io_adaptbx/ccp4_mtzlib_fem.hpp ccp4io_adaptbx/ccp4_other_fem.hpp ccp4io_adaptbx/ccp4_parser_f.h ccp4io_adaptbx/ccp4_parser_fem.hpp ccp4io_adaptbx/ccp4_symlib_fem.hpp ccp4io_adaptbx/cmaplib_f.h ccp4io_adaptbx/cmtzlib_f.h ccp4io_adaptbx/csymlib_f.h ccp4io_adaptbx/library_f.h ccp4io_adaptbx/printf_wrappers.h ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/fftlib.hpp sent 87,977 bytes received 326 bytes 176,606.00 bytes/sec total size is 86,683 speedup is 0.98 building file list ... done cctbx/ cctbx/adptbx.h cctbx/anharmonic.h cctbx/coordinates.h cctbx/crystal_orientation.h cctbx/cumulative_intensity_distribution.h cctbx/error.h cctbx/french_wilson.h cctbx/hendrickson_lattman.h cctbx/import_scitbx_af.h cctbx/miller.h cctbx/restraints.h cctbx/tagged_value.h cctbx/uctbx.h cctbx/adp_restraints/ cctbx/adp_restraints/adp_restraints.h cctbx/adp_restraints/adp_similarity.h cctbx/adp_restraints/aniso_restraints.h cctbx/adp_restraints/fixed_u_eq_adp.h cctbx/adp_restraints/isotropic_adp.h cctbx/adp_restraints/rigid_bond.h cctbx/adp_restraints/rigu.h cctbx/adptbx/ cctbx/adptbx/hirshfeld.h cctbx/covariance/ cctbx/covariance/covariance.h cctbx/crystal/ cctbx/crystal/asu_clusters.h cctbx/crystal/close_packing.h cctbx/crystal/coordination_sequences.h cctbx/crystal/direct_space_asu.h cctbx/crystal/incremental_pairs.h cctbx/crystal/namespace.h cctbx/crystal/neighbors_fast.h cctbx/crystal/neighbors_simple.h cctbx/crystal/pair_tables.h cctbx/crystal/site_cluster_analysis.h cctbx/crystal/symmetry.h cctbx/crystal/workarounds_bpl.h cctbx/dmtbx/ cctbx/dmtbx/triplet_generator.h cctbx/dmtbx/triplet_phase_relation.h cctbx/eltbx/ cctbx/eltbx/attenuation_coefficient.h cctbx/eltbx/basic.h cctbx/eltbx/chemical_elements.h cctbx/eltbx/covalent_radii.h cctbx/eltbx/electron_scattering.h cctbx/eltbx/fp_fdp.h cctbx/eltbx/henke.h cctbx/eltbx/icsd_radii.h cctbx/eltbx/neutron.h cctbx/eltbx/sasaki.h cctbx/eltbx/tiny_pse.h cctbx/eltbx/wavelengths.h cctbx/eltbx/xray_scattering.h cctbx/eltbx/xray_scattering/ cctbx/eltbx/xray_scattering/form_factor.h cctbx/eltbx/xray_scattering/gaussian.h cctbx/eltbx/xray_scattering/n_gaussian.h cctbx/eltbx/xray_scattering/n_gaussian_raw.h cctbx/examples/ cctbx/examples/merging/ cctbx/examples/merging/postrefine_base.h cctbx/examples/merging/xscale_prototype_core.h cctbx/geometry/ cctbx/geometry/geometry.h cctbx/geometry_restraints/ cctbx/geometry_restraints/angle.h cctbx/geometry_restraints/asu_cache.h cctbx/geometry_restraints/bond.h cctbx/geometry_restraints/bond_misc.h cctbx/geometry_restraints/bond_similarity.h cctbx/geometry_restraints/bond_sorted.h cctbx/geometry_restraints/chirality.h cctbx/geometry_restraints/dihedral.h cctbx/geometry_restraints/motif.h cctbx/geometry_restraints/namespace.h cctbx/geometry_restraints/nonbonded.h cctbx/geometry_restraints/nonbonded_sorted.h cctbx/geometry_restraints/parallelity.h cctbx/geometry_restraints/planarity.h cctbx/geometry_restraints/proxy_select.h cctbx/geometry_restraints/shared_wrapper_pickle.hpp cctbx/geometry_restraints/sorted_asu_proxies.h cctbx/geometry_restraints/utils.h cctbx/maptbx/ cctbx/maptbx/asymmetric_map.h cctbx/maptbx/average_densities.h cctbx/maptbx/connectivity.h cctbx/maptbx/coordinate_transformers.h cctbx/maptbx/copy.h cctbx/maptbx/fft.h cctbx/maptbx/fsc.h cctbx/maptbx/ft_analytical_1d_point_scatterer_at_origin.h cctbx/maptbx/grid_indices_around_sites.h cctbx/maptbx/grid_tags.h cctbx/maptbx/gridding.h cctbx/maptbx/histogram.h cctbx/maptbx/interpolation.h cctbx/maptbx/loft.h cctbx/maptbx/map_accumulator.h cctbx/maptbx/marked_grid_points.h cctbx/maptbx/mask.h cctbx/maptbx/mask_utils.h cctbx/maptbx/namespace.h cctbx/maptbx/peak_search.h cctbx/maptbx/resolution.h cctbx/maptbx/skeletons.h cctbx/maptbx/sphericity.h cctbx/maptbx/standard_deviations_around_sites.hpp cctbx/maptbx/statistics.h cctbx/maptbx/structure_factors.h cctbx/maptbx/target_and_gradients.h cctbx/maptbx/utils.h cctbx/maptbx/accessors/ cctbx/maptbx/accessors/c_grid_p1.h cctbx/maptbx/accessors/c_grid_padded_p1.h cctbx/maptbx/bcr/ cctbx/maptbx/bcr/bcr.h cctbx/masks/ cctbx/masks/around_atoms.h cctbx/masks/flood_fill.h cctbx/math/ cctbx/math/array_utils.h cctbx/math/cos_sin_table.h cctbx/math/loop_n_from_m.h cctbx/math/mod.h cctbx/miller/ cctbx/miller/amplitude_normalisation.h cctbx/miller/asu.h cctbx/miller/bins.h cctbx/miller/change_basis.h cctbx/miller/expand_to_p1.h cctbx/miller/f_calc_map.h cctbx/miller/index_generator.h cctbx/miller/index_span.h cctbx/miller/lookup_utils.h cctbx/miller/match.h cctbx/miller/match_bijvoet_mates.h cctbx/miller/match_indices.h cctbx/miller/match_multi_indices.h cctbx/miller/math.h cctbx/miller/merge_equivalents.h cctbx/miller/phase_integrator.h cctbx/miller/phase_transfer.h cctbx/miller/randomize_amplitude_and_phase.h cctbx/miller/slices.h cctbx/miller/sym_equiv.h cctbx/miller/union_of_indices.h cctbx/multipolar/ cctbx/multipolar/aspherical.h cctbx/sgtbx/ cctbx/sgtbx/basic.h cctbx/sgtbx/brick.h cctbx/sgtbx/change_of_basis_op.h cctbx/sgtbx/find_affine.h cctbx/sgtbx/group_codes.h cctbx/sgtbx/lattice_symmetry.h cctbx/sgtbx/lattice_tr.h cctbx/sgtbx/miller_ops.h cctbx/sgtbx/operator_from_axis_direction.h cctbx/sgtbx/parse_string.h cctbx/sgtbx/phase_info.h cctbx/sgtbx/reciprocal_space_asu.h cctbx/sgtbx/reciprocal_space_reference_asu.h cctbx/sgtbx/reference_settings.h cctbx/sgtbx/rot_mx.h cctbx/sgtbx/rot_mx_hash.h cctbx/sgtbx/rot_mx_info.h cctbx/sgtbx/rotation_matrices.h cctbx/sgtbx/row_echelon_solve.h cctbx/sgtbx/rt_mx.h cctbx/sgtbx/rt_mx_hash.h cctbx/sgtbx/search_symmetry.h cctbx/sgtbx/select_generators.h cctbx/sgtbx/seminvariant.h cctbx/sgtbx/site_constraints.h cctbx/sgtbx/site_symmetry.h cctbx/sgtbx/site_symmetry_table.h cctbx/sgtbx/smith_normal_form.h cctbx/sgtbx/space_group.h cctbx/sgtbx/space_group_hash.h cctbx/sgtbx/space_group_type.h cctbx/sgtbx/sym_equiv_sites.h cctbx/sgtbx/symbols.h cctbx/sgtbx/sys_abs_equiv.h cctbx/sgtbx/tensor_rank_2.h cctbx/sgtbx/tensors.h cctbx/sgtbx/tr_group.h cctbx/sgtbx/tr_group_hash.h cctbx/sgtbx/tr_vec.h cctbx/sgtbx/tr_vec_hash.h cctbx/sgtbx/utils.h cctbx/sgtbx/wyckoff.h cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h cctbx/sgtbx/direct_space_asu/proto/cut.h cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h cctbx/sgtbx/direct_space_asu/proto/expressions.h cctbx/sgtbx/direct_space_asu/proto/facet_collection.h cctbx/sgtbx/direct_space_asu/proto/reference_table.h cctbx/sgtbx/direct_space_asu/proto/shortcuts.h cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h cctbx/symmetry_search/ cctbx/symmetry_search/translation_refinement.h cctbx/translation_search/ cctbx/translation_search/fast_nv1995.h cctbx/translation_search/fast_terms.h cctbx/translation_search/namespace.h cctbx/translation_search/symmetry_flags.h cctbx/translation_search/fast_nv1995/ cctbx/translation_search/fast_nv1995/combinations.h cctbx/translation_search/fast_nv1995/intermediates.h cctbx/translation_search/fast_nv1995/summations.h cctbx/uctbx/ cctbx/uctbx/fast_minimum_reduction.h cctbx/uctbx/determine_unit_cell/ cctbx/uctbx/determine_unit_cell/NCDist.h cctbx/xray/ cctbx/xray/conversions.h cctbx/xray/curvatures_simple.h cctbx/xray/each_hkl_gradients_direct.h cctbx/xray/extinction.h cctbx/xray/f_model.h cctbx/xray/fast_gradients.h cctbx/xray/gradient_flags.h cctbx/xray/gradients_direct.h cctbx/xray/grouped_data.h cctbx/xray/hr_ht_cache.h cctbx/xray/minimization.h cctbx/xray/observations.h cctbx/xray/packing_order.h cctbx/xray/parameter_map.h cctbx/xray/sampled_model_density.h cctbx/xray/sampling_base.h cctbx/xray/sampling_loop.h cctbx/xray/scatterer.h cctbx/xray/scatterer_flags.h cctbx/xray/scatterer_utils.h cctbx/xray/scattering_type_registry.h cctbx/xray/sigmaa.h cctbx/xray/structure_factors_direct.h cctbx/xray/structure_factors_simple.h cctbx/xray/targets.h cctbx/xray/twin_component.h cctbx/xray/twin_targets.h cctbx/xray/targets/ cctbx/xray/targets/common_results.h cctbx/xray/targets/correlation.h cctbx/xray/targets/least_squares.h cctbx/xray/targets/mlf.h cctbx/xray/targets/mlhl.h cctbx/xray/targets/mli.h cctbx/xray/targets/shelxl_wght_ls.hpp sent 1,904,975 bytes received 4,420 bytes 3,818,790.00 bytes/sec total size is 1,887,892 speedup is 0.99 building file list ... done cma_es/ cma_es/cma/ cma_es/cma/cmaes.h cma_es/cma/cmaes_interface.h sent 6,886 bytes received 60 bytes 13,892.00 bytes/sec total size is 6,671 speedup is 0.96 building file list ... done sent 190 bytes received 12 bytes 404.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done dxtbx/ dxtbx/error.h dxtbx/imageset.h dxtbx/array_family/ dxtbx/array_family/flex_table.h dxtbx/array_family/flex_table_suite.h dxtbx/array_family/ref_pickle_double_buffered.h dxtbx/boost_python/ dxtbx/boost_python/compression.h dxtbx/format/ dxtbx/format/image.h dxtbx/format/boost_python/ dxtbx/format/boost_python/cbf_read_buffer.h dxtbx/masking/ dxtbx/masking/goniometer_shadow_masking.h dxtbx/masking/masking.h dxtbx/model/ dxtbx/model/beam.h dxtbx/model/crystal.h dxtbx/model/detector.h dxtbx/model/experiment.h dxtbx/model/experiment_list.h dxtbx/model/goniometer.h dxtbx/model/kappa_goniometer.h dxtbx/model/model_helpers.h dxtbx/model/multi_axis_goniometer.h dxtbx/model/panel.h dxtbx/model/panel_data.h dxtbx/model/parallax_correction.h dxtbx/model/pixel_to_millimeter.h dxtbx/model/ray_intersection.h dxtbx/model/scan.h dxtbx/model/scan_helpers.h dxtbx/model/spectrum.h dxtbx/model/virtual_panel.h dxtbx/model/boost_python/ dxtbx/model/boost_python/pickle_suite.h dxtbx/model/boost_python/to_from_dict.h sent 396,154 bytes received 610 bytes 793,528.00 bytes/sec total size is 393,719 speedup is 0.99 building file list ... done ./ fem.hpp noexcept_false.hpp fem/ fem/arr.hpp fem/arr_and_str_indices.hpp fem/arr_ref.hpp fem/arr_size.hpp fem/close_chain.hpp fem/common.hpp fem/data.hpp fem/data_of_type.hpp fem/data_type_star.hpp fem/dimension.hpp fem/do.hpp fem/error_utils.hpp fem/file_positioning_chain.hpp fem/format.hpp fem/inquire_chain.hpp fem/intrinsics.hpp fem/intrinsics_extra.hpp fem/io.hpp fem/io_exceptions.hpp fem/main.hpp fem/major_types.hpp fem/open_chain.hpp fem/read.hpp fem/size_t.hpp fem/star.hpp fem/stop.hpp fem/str.hpp fem/str_arr_ref.hpp fem/str_ref.hpp fem/variant.hpp fem/write.hpp fem/zero.hpp fem/utils/ fem/utils/char.hpp fem/utils/double_to_string.hpp fem/utils/equivalence.hpp fem/utils/int_types.hpp fem/utils/misc.hpp fem/utils/path.hpp fem/utils/random.hpp fem/utils/real_as_string.hpp fem/utils/simple_streams.hpp fem/utils/string.hpp fem/utils/string_to_double.hpp fem/utils/string_to_double_fmt.hpp fem/utils/token.hpp sent 204,033 bytes received 918 bytes 409,902.00 bytes/sec total size is 200,764 speedup is 0.98 building file list ... done gltbx/ gltbx/error.h gltbx/error_utils.h gltbx/fonts_ucs.h gltbx/glext.h gltbx/include_opengl.h gltbx/pointer_args_bpl.h gltbx/quadrics.h gltbx/special_wrapper_support.h gltbx/util.h sent 598,794 bytes received 190 bytes 1,197,968.00 bytes/sec total size is 597,954 speedup is 1.00 building file list ... done iotbx/ iotbx/error.h iotbx/detectors/ iotbx/detectors/bruker.h iotbx/detectors/display.h iotbx/detectors/image_divider.h iotbx/detectors/scanbox.h iotbx/detectors/context/ iotbx/detectors/context/spot_xy_convention.h iotbx/dsn6/ iotbx/dsn6/dsn6.hpp iotbx/mtz/ iotbx/mtz/batch.h iotbx/mtz/column.h iotbx/mtz/crystal.h iotbx/mtz/dataset.h iotbx/mtz/object.h iotbx/pdb/ iotbx/pdb/common_residue_names.h iotbx/pdb/hierarchy.h iotbx/pdb/hierarchy_atoms.h iotbx/pdb/hierarchy_bpl.h iotbx/pdb/hybrid_36_c.h iotbx/pdb/hybrid_36_cpp.h iotbx/pdb/input.h iotbx/pdb/modified_aa_names.h iotbx/pdb/modified_rna_dna_names.h iotbx/pdb/namespace.h iotbx/pdb/rna_dna_atom_names.h iotbx/pdb/small_str.h iotbx/pdb/utils.h iotbx/pdb/write_utils.h iotbx/pdb/write_utils_bpl.h iotbx/pdb/xray_structure.h iotbx/shelx/ iotbx/shelx/hklf.h iotbx/xplor/ iotbx/xplor/map_reader.h iotbx/xplor/map_writer.h sent 270,387 bytes received 629 bytes 180,677.33 bytes/sec total size is 267,526 speedup is 0.99 building file list ... done sent 459 bytes received 12 bytes 942.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done mmtbx/ mmtbx/error.h mmtbx/import_scitbx_af.h mmtbx/alignment/ mmtbx/alignment/align.h mmtbx/alignment/alignment.h mmtbx/alignment/tables.h mmtbx/building/ mmtbx/building/loop_closure/ mmtbx/building/loop_closure/ccd.h mmtbx/bulk_solvent/ mmtbx/bulk_solvent/bulk_solvent.h mmtbx/bulk_solvent/mosaic.h mmtbx/den/ mmtbx/den/den.h mmtbx/dynamics/ mmtbx/dynamics/dynamics.h mmtbx/f_model/ mmtbx/f_model/f_model.h mmtbx/geometry/ mmtbx/geometry/asa.hpp mmtbx/geometry/calculator.hpp mmtbx/geometry/clash.hpp mmtbx/geometry/containment.hpp mmtbx/geometry/flattening.hpp mmtbx/geometry/indexing.hpp mmtbx/geometry/overlap.hpp mmtbx/geometry/primitive.hpp mmtbx/geometry/sphere_surface_sampling.hpp mmtbx/geometry/boost_python/ mmtbx/geometry/boost_python/containment.hpp mmtbx/geometry/boost_python/indexing.hpp mmtbx/geometry_restraints/ mmtbx/geometry_restraints/ramachandran.h mmtbx/geometry_restraints/reference_coordinate.h mmtbx/hydrogens/ mmtbx/hydrogens/hydrogens.h mmtbx/masks/ mmtbx/masks/atom_mask.h mmtbx/masks/grid_symop.h mmtbx/masks/util.h mmtbx/max_lik/ mmtbx/max_lik/max_lik.h mmtbx/max_lik/solvent_distribution_nco_09may2005.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h mmtbx/max_lik/solvent_distribution_nco_14mar2005.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h mmtbx/max_lik/wat_dist_r_0_1.h mmtbx/max_lik/wat_dist_r_2p0_2p5.h mmtbx/ncs/ mmtbx/ncs/cartesian_restraints.h mmtbx/ncs/tncs.h mmtbx/pair_interaction/ mmtbx/pair_interaction/interaction.h mmtbx/probe/ mmtbx/probe/Common.h mmtbx/probe/DotSpheres.h mmtbx/probe/Scoring.h mmtbx/probe/SpatialQuery.h mmtbx/reduce/ mmtbx/reduce/InteractionGraph.h mmtbx/reduce/Optimizers.h mmtbx/reduce/PositionReturn.h mmtbx/rotamer/ mmtbx/rotamer/fit.h mmtbx/rsr/ mmtbx/rsr/rsr.h mmtbx/scaling/ mmtbx/scaling/absolute_scaling.h mmtbx/scaling/outlier.h mmtbx/scaling/relative_scaling.h mmtbx/scaling/scaling.h mmtbx/scaling/twinning.h mmtbx/secondary_structure/ mmtbx/secondary_structure/dssp.hpp mmtbx/secondary_structure/identify.hpp mmtbx/tls/ mmtbx/tls/decompose.h mmtbx/tls/optimise_amplitudes.h mmtbx/tls/tls.h mmtbx/tls/utils.h mmtbx/utils/ mmtbx/utils/utils.h mmtbx/validation/ mmtbx/validation/ramachandran/ mmtbx/validation/ramachandran/rama8000_tables.h mmtbx/validation/ramachandran/rama_eval.h sent 2,052,662 bytes received 1,291 bytes 4,107,906.00 bytes/sec total size is 2,046,334 speedup is 1.00 building file list ... done omptbx/ omptbx/lock.h omptbx/omp_or_stubs.h omptbx/stubs.h sent 2,109 bytes received 76 bytes 4,370.00 bytes/sec total size is 1,850 speedup is 0.85 building file list ... done rstbx/ rstbx/backplane.h rstbx/import_scitbx_af.hpp rstbx/apps/ rstbx/apps/stills/ rstbx/apps/stills/simple_integration.h rstbx/bandpass/ rstbx/bandpass/parameters.h rstbx/bandpass/subpixel_joint_model.h rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/bpcx/detector_model/sensor.h rstbx/diffraction/ rstbx/diffraction/ewald_sphere.h rstbx/diffraction/partial_spot_position_partial_H.h rstbx/diffraction/reflection_range.h rstbx/diffraction/fastbragg/ rstbx/diffraction/fastbragg/fastbragg.h rstbx/dps_core/ rstbx/dps_core/direction.h rstbx/dps_core/directional_fft.h rstbx/dps_core/dps_core.h rstbx/dps_core/spotclass.h rstbx/indexing_api/ rstbx/indexing_api/indexing_api.h rstbx/simage/ rstbx/simage/image_simple.hpp rstbx/simulation/ rstbx/simulation/sim_xfel1.h rstbx/symmetry/ rstbx/symmetry/constraints/ rstbx/symmetry/constraints/a_g_conversion.h sent 111,364 bytes received 400 bytes 223,528.00 bytes/sec total size is 109,476 speedup is 0.98 building file list ... done scitbx/ scitbx/auto_array.h scitbx/constants.h scitbx/cubicle_neighbors.hpp scitbx/cubicles.h scitbx/error.h scitbx/error_utils.h scitbx/histogram.h scitbx/indexed_value.h scitbx/iso_surface.h scitbx/lbfgs.h scitbx/lbfgsb.h scitbx/mat2.h scitbx/mat3.h scitbx/numerical.h scitbx/r3_utils.hpp scitbx/random.h scitbx/random_legacy_boost_1_63.h scitbx/rational.h scitbx/rotr3.h scitbx/sym_mat2.h scitbx/sym_mat3.h scitbx/type_holder.h scitbx/vec2.h scitbx/vec3.h scitbx/weighted_histogram.h scitbx/array_family/ scitbx/array_family/array_adaptor.h scitbx/array_family/block_iterator.h scitbx/array_family/counts.h scitbx/array_family/error.h scitbx/array_family/flex_types.h scitbx/array_family/initialiser.h scitbx/array_family/linear_interpolation.h scitbx/array_family/loops.h scitbx/array_family/memory.h scitbx/array_family/misc_functions.h scitbx/array_family/owning_ref.h scitbx/array_family/range.h scitbx/array_family/ref.h scitbx/array_family/ref_matrix.h scitbx/array_family/ref_reductions.h scitbx/array_family/selections.h scitbx/array_family/shared.h scitbx/array_family/shared_plain.h scitbx/array_family/simple_io.h scitbx/array_family/simple_tiny_io.h scitbx/array_family/slice.h scitbx/array_family/small.h scitbx/array_family/small_plain.h scitbx/array_family/sort.h scitbx/array_family/tiny.h scitbx/array_family/tiny_mat_ref.h scitbx/array_family/tiny_plain.h scitbx/array_family/tiny_types.h scitbx/array_family/type_traits.h scitbx/array_family/versa.h scitbx/array_family/versa_matrix.h scitbx/array_family/versa_plain.h scitbx/array_family/accessors/ scitbx/array_family/accessors/c_grid.h scitbx/array_family/accessors/c_grid_padded.h scitbx/array_family/accessors/c_grid_padded_periodic.h scitbx/array_family/accessors/c_grid_periodic.h scitbx/array_family/accessors/c_index_1d_calculator.h scitbx/array_family/accessors/c_interval_grid.h scitbx/array_family/accessors/f_grid.h scitbx/array_family/accessors/flex_grid.h scitbx/array_family/accessors/mat_grid.h scitbx/array_family/accessors/packed_matrix.h scitbx/array_family/accessors/rectangular_full_packed.h scitbx/array_family/accessors/row_and_column.h scitbx/array_family/accessors/striding.h scitbx/array_family/accessors/traits.h scitbx/array_family/accessors/trivial.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/byte_str.h scitbx/array_family/boost_python/c_grid_flex_conversions.h scitbx/array_family/boost_python/flex_helpers.h scitbx/array_family/boost_python/flex_pickle_double_buffered.h scitbx/array_family/boost_python/flex_pickle_single_buffered.h scitbx/array_family/boost_python/flex_wrapper.h scitbx/array_family/boost_python/flex_wrapper_complex.h scitbx/array_family/boost_python/numpy_bridge.hpp scitbx/array_family/boost_python/owning_ref_conversions.h scitbx/array_family/boost_python/packed_to_flex_conversions.h scitbx/array_family/boost_python/passing_flex_by_reference.h scitbx/array_family/boost_python/range_wrappers.h scitbx/array_family/boost_python/ref_flex_conversions.h scitbx/array_family/boost_python/ref_from_array.h scitbx/array_family/boost_python/ref_pickle_double_buffered.h scitbx/array_family/boost_python/selections_wrapper.h scitbx/array_family/boost_python/shared_flat_conversions.h scitbx/array_family/boost_python/shared_flex_conversions.h scitbx/array_family/boost_python/shared_wrapper.h scitbx/array_family/boost_python/utils.h scitbx/array_family/detail/ scitbx/array_family/detail/auto_allocator.h scitbx/array_family/detail/generic_array_functors.h scitbx/array_family/detail/generic_array_operators.h scitbx/array_family/detail/misc.h scitbx/array_family/detail/push_back_etc.h scitbx/array_family/detail/reducing_boolean_mem_fun.h scitbx/array_family/detail/ref_helpers.h scitbx/array_family/detail/tiny_helpers.h scitbx/boost_python/ scitbx/boost_python/array_as_list.h scitbx/boost_python/container_conversions.h scitbx/boost_python/cstringio_utils.h scitbx/boost_python/is_polymorphic_workaround.h scitbx/boost_python/iterator_range.hpp scitbx/boost_python/iterator_wrappers.h scitbx/boost_python/pair_as_tuple.hpp scitbx/boost_python/sequence_as_array.h scitbx/boost_python/slice.h scitbx/boost_python/stl_map_as_dict.h scitbx/boost_python/utils.h scitbx/examples/ scitbx/examples/bevington/ scitbx/examples/bevington/prototype_core.h scitbx/fftpack/ scitbx/fftpack/complex_to_complex.h scitbx/fftpack/complex_to_complex_2d.h scitbx/fftpack/complex_to_complex_3d.h scitbx/fftpack/factorization.h scitbx/fftpack/gridding.h scitbx/fftpack/real_to_complex.h scitbx/fftpack/real_to_complex_3d.h scitbx/fftpack/detail/ scitbx/fftpack/detail/real_to_complex_backward.h scitbx/fftpack/detail/real_to_complex_forward.h scitbx/fftpack/detail/ref.h scitbx/glmtbx/ scitbx/glmtbx/family.h scitbx/glmtbx/glm.h scitbx/glmtbx/robust_glm.h scitbx/graphics_utils/ scitbx/graphics_utils/colors.h scitbx/lbfgs/ scitbx/lbfgs/drop_convergence_test.h scitbx/lbfgs/raw.h scitbx/lbfgs/raw_reference.h scitbx/lbfgsb/ scitbx/lbfgsb/fortran_interface.h scitbx/lbfgsb/raw.h scitbx/line_search/ scitbx/line_search/more_thuente_1994.h scitbx/line_search/more_thuente_1994_raw.h scitbx/lstbx/ scitbx/lstbx/normal_equations.h scitbx/math/ scitbx/math/2d_zernike_moments.h scitbx/math/accumulators.h scitbx/math/angle_derivative.h scitbx/math/approx_equal.h scitbx/math/atanh.h scitbx/math/basic_statistics.h scitbx/math/bessel.h scitbx/math/cartesian_product_fixed_size.hpp scitbx/math/chebyshev.h scitbx/math/compile_time.h scitbx/math/continued_fraction.h scitbx/math/copysign.h scitbx/math/cubic_equation.h scitbx/math/dihedral.h scitbx/math/distance_difference.h scitbx/math/distributions.h scitbx/math/eigensystem.h scitbx/math/erf.h scitbx/math/euler_angles.h scitbx/math/fast_approx_math.h scitbx/math/floating_point_epsilon.h scitbx/math/g_function.h scitbx/math/gamma.h scitbx/math/gaussian_fit_1d_analytical.h scitbx/math/gcd.h scitbx/math/golay.h scitbx/math/halton.h scitbx/math/icosahedron.h scitbx/math/imaginary.h scitbx/math/inertia_tensor.h scitbx/math/interpolation.h scitbx/math/jacks_expf.h scitbx/math/lambertw.h scitbx/math/least_squares_plane.h scitbx/math/linear_correlation.h scitbx/math/linear_interpolation.h scitbx/math/linear_regression.h scitbx/math/mean_and_variance.h scitbx/math/minimum_covering_sphere.h scitbx/math/modulo.h scitbx/math/namespace.h scitbx/math/numeric_limits.h scitbx/math/orthonormal_basis.h scitbx/math/parabolic_cylinder_d.h scitbx/math/phase_error.h scitbx/math/polygon_intersection.h scitbx/math/principal_axes_of_inertia.h scitbx/math/quadrature.h scitbx/math/r3_rotation.h scitbx/math/resample.h scitbx/math/rotate_around_axis.h scitbx/math/rotation.h scitbx/math/superpose.h scitbx/math/tetrahedron.h scitbx/math/traits.h scitbx/math/unimodular_generator.h scitbx/math/utils.h scitbx/math/weighted_covariance.h scitbx/math/zernike.h scitbx/math/zernike_moments.h scitbx/math/erf/ scitbx/math/erf/constants.h scitbx/math/erf/engine.h scitbx/math/gaussian/ scitbx/math/gaussian/fit.h scitbx/math/gaussian/namespace.h scitbx/math/gaussian/sum.h scitbx/math/gaussian/term.h scitbx/matrix/ scitbx/matrix/as_xyz.h scitbx/matrix/cholesky.h scitbx/matrix/delta_tensors.h scitbx/matrix/diagonal.h scitbx/matrix/eigensystem.h scitbx/matrix/givens.h scitbx/matrix/householder.h scitbx/matrix/inversion.h scitbx/matrix/lu_decomposition.h scitbx/matrix/matrix_vector_operations.h scitbx/matrix/move.h scitbx/matrix/multiply.h scitbx/matrix/norms.h scitbx/matrix/outer_product.h scitbx/matrix/packed.h scitbx/matrix/row_echelon.h scitbx/matrix/row_echelon_full_pivoting.h scitbx/matrix/row_echelon_full_pivoting_impl.h scitbx/matrix/row_echelon_full_pivoting_small.h scitbx/matrix/special_matrices.h scitbx/matrix/svd.h scitbx/matrix/symmetric_rank_1_update.h scitbx/matrix/tensor_rank_2.h scitbx/matrix/tensors.h scitbx/matrix/tests.h scitbx/matrix/transpose_multiply.h scitbx/matrix/triangular_systems.h scitbx/matrix/vector_operations.h scitbx/matrix/tests/ scitbx/matrix/tests/utils.h scitbx/minpack/ scitbx/minpack/levenberg_marquardt.h scitbx/minpack/raw.h scitbx/misc/ scitbx/misc/file_utils.h scitbx/misc/positive_getitem_index.h scitbx/misc/split_lines.h scitbx/random/ scitbx/random/mersenne_twister.h scitbx/random/variate_generator.h scitbx/random/boost_python/ scitbx/random/boost_python/random.h scitbx/rigid_body/ scitbx/rigid_body/array_packing.h scitbx/rigid_body/body_lib.h scitbx/rigid_body/body_t.h scitbx/rigid_body/featherstone.h scitbx/rigid_body/joint_lib.h scitbx/rigid_body/joint_t.h scitbx/rigid_body/matrix_helpers.h scitbx/rigid_body/namespace.h scitbx/rigid_body/spatial_lib.h scitbx/rigid_body/tardy.h scitbx/serialization/ scitbx/serialization/base_256.h scitbx/serialization/double_buffered.h scitbx/serialization/single_buffered.h scitbx/slatec/ scitbx/slatec/lib_c.h scitbx/slatec/lib_cpp.h scitbx/sparse/ scitbx/sparse/approx_equal.h scitbx/sparse/dfs.h scitbx/sparse/io.h scitbx/sparse/lu_factorization.h scitbx/sparse/matrix.h scitbx/sparse/operators.h scitbx/sparse/random.h scitbx/sparse/triangular.h scitbx/sparse/util.h scitbx/sparse/vector.h scitbx/sparse/boost_python/ scitbx/sparse/boost_python/vector.h scitbx/stl/ scitbx/stl/map_as_python_dict.h scitbx/stl/map_fwd.h scitbx/stl/map_wrapper.h scitbx/stl/set_wrapper.h scitbx/stl/vector_as_python_list.h scitbx/stl/vector_io.h scitbx/stl/vector_wrapper.h scitbx/suffixtree/ scitbx/suffixtree/builder.hpp scitbx/suffixtree/edge.hpp scitbx/suffixtree/exception.hpp scitbx/suffixtree/glyph.hpp scitbx/suffixtree/iterator.hpp scitbx/suffixtree/matching_statistics.hpp scitbx/suffixtree/tree.hpp scitbx/suffixtree/word.hpp scitbx/suffixtree/boost_python/ scitbx/suffixtree/boost_python/edge_exports.hpp scitbx/suffixtree/boost_python/iterator_wrapper.hpp scitbx/suffixtree/boost_python/object_extensions.hpp scitbx/suffixtree/boost_python/tree_exports.hpp scitbx/util/ scitbx/util/cpu_timer.h scitbx/wigner/ scitbx/wigner/wigner3j.h sent 1,906,400 bytes received 5,521 bytes 3,823,842.00 bytes/sec total size is 1,886,121 speedup is 0.99 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/error.h smtbx/import_cctbx.h smtbx/import_scitbx_af.h smtbx/ab_initio/ smtbx/ab_initio/density_modification.h smtbx/refinement/ smtbx/refinement/import_cctbx_xray.h smtbx/refinement/least_squares.h smtbx/refinement/weighting_schemes.h smtbx/refinement/constraints/ smtbx/refinement/constraints/affine.h smtbx/refinement/constraints/direction.h smtbx/refinement/constraints/geometrical_hydrogens.h smtbx/refinement/constraints/occupancy.h smtbx/refinement/constraints/proxy.h smtbx/refinement/constraints/reparametrisation.h smtbx/refinement/constraints/rigid.h smtbx/refinement/constraints/same_group.h smtbx/refinement/constraints/scaled_adp.h smtbx/refinement/constraints/scatterer_parameters.h smtbx/refinement/constraints/shared.h smtbx/refinement/constraints/special_position.h smtbx/refinement/constraints/symmetry_equivalent.h smtbx/refinement/constraints/u_eq_dependent_u_iso.h smtbx/refinement/constraints/u_iso_dependent_u_iso.h smtbx/refinement/restraints/ smtbx/refinement/restraints/origin_fixing.h smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/standard_xray.h smtbx/structure_factors/direct/table_based.h sent 182,173 bytes received 512 bytes 365,370.00 bytes/sec total size is 179,686 speedup is 0.98 building file list ... done spotfinder/ spotfinder/applications/ spotfinder/applications/find_active_area.h spotfinder/core_toolbox/ spotfinder/core_toolbox/distl.h spotfinder/core_toolbox/hough.h spotfinder/core_toolbox/libdistl.h spotfinder/core_toolbox/spot_shapes.h spotfinder/core_toolbox/spot_types.h spotfinder/core_toolbox/spotfilter.h spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/singlemask.h spotfinder/dxtbx_toolbox/ spotfinder/dxtbx_toolbox/distl.h spotfinder/dxtbx_toolbox/libdistl.h sent 42,961 bytes received 221 bytes 86,364.00 bytes/sec total size is 41,966 speedup is 0.97 building file list ... done tbxx/ tbxx/alignment.h tbxx/error_utils.hpp tbxx/libc_backtrace.hpp tbxx/optional_copy.hpp tbxx/pretty_type_name.hpp tbxx/time_accu.hpp sent 12,025 bytes received 133 bytes 24,316.00 bytes/sec total size is 11,532 speedup is 0.95 building file list ... done sent 151 bytes received 12 bytes 326.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done ./ boost_adaptbx/ boost_adaptbx/type_id_eq.h cctbx/ cctbx/boost_python/ cctbx/boost_python/flex_fwd.h scitbx/ scitbx/lbfgs_fem.hpp scitbx/array_family/ scitbx/array_family/operator_traits_builtin.h scitbx/array_family/ref_algebra.h scitbx/array_family/ref_apply.h scitbx/array_family/shared_algebra.h scitbx/array_family/shared_apply.h scitbx/array_family/shared_plain_apply.h scitbx/array_family/shared_reductions.h scitbx/array_family/small_algebra.h scitbx/array_family/small_apply.h scitbx/array_family/small_plain_apply.h scitbx/array_family/small_reductions.h scitbx/array_family/tiny_algebra.h scitbx/array_family/tiny_apply.h scitbx/array_family/tiny_plain_apply.h scitbx/array_family/tiny_reductions.h scitbx/array_family/versa_algebra.h scitbx/array_family/versa_apply.h scitbx/array_family/versa_plain_apply.h scitbx/array_family/versa_reductions.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/flex_fwd.h scitbx/array_family/detail/ scitbx/array_family/detail/operator_functors.h scitbx/array_family/detail/std_imports.h smtbx/boost_python/ smtbx/boost_python/flex_fwd.h sent 347,313 bytes received 537 bytes 695,700.00 bytes/sec total size is 345,070 speedup is 0.99 building file list ... done sent 250 bytes received 12 bytes 174.67 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/ boost_adaptbx/command_line/ sent 513 bytes received 22 bytes 1,070.00 bytes/sec total size is 6,883 speedup is 12.87 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/command_line/ sent 232 bytes received 22 bytes 508.00 bytes/sec total size is 1,215 speedup is 4.78 building file list ... done sent 143 bytes received 12 bytes 310.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done cctbx/ cctbx/command_line/ cctbx/command_line/web.install.csh sent 3,059 bytes received 41 bytes 6,200.00 bytes/sec total size is 39,666 speedup is 12.80 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done crys3d/ crys3d/command_line/ sent 469 bytes received 22 bytes 982.00 bytes/sec total size is 31,515 speedup is 64.19 building file list ... done dxtbx/ dxtbx/command_line/ sent 881 bytes received 22 bytes 1,806.00 bytes/sec total size is 82,029 speedup is 90.84 building file list ... done fable/ fable/command_line/ sent 466 bytes received 22 bytes 976.00 bytes/sec total size is 15,542 speedup is 31.85 building file list ... done gltbx/ gltbx/command_line/ sent 192 bytes received 22 bytes 428.00 bytes/sec total size is 606 speedup is 2.83 building file list ... done iotbx/ iotbx/command_line/ sent 2,854 bytes received 22 bytes 5,752.00 bytes/sec total size is 240,936 speedup is 83.77 building file list ... done libtbx/ libtbx/command_line/ libtbx/command_line/bash.sh libtbx/command_line/bibtex.sh libtbx/command_line/bundle_as_selfx.csh libtbx/command_line/configure.bat libtbx/command_line/configure.sh libtbx/command_line/csh.sh libtbx/command_line/exec.sh libtbx/command_line/gdb.sh libtbx/command_line/latex.sh libtbx/command_line/pdflatex.sh libtbx/command_line/refresh.bat libtbx/command_line/refresh.sh libtbx/command_line/sh.sh libtbx/command_line/tcsh.sh libtbx/command_line/unpack_in_sources.csh libtbx/command_line/valgrind.sh sent 7,310 bytes received 329 bytes 15,278.00 bytes/sec total size is 175,321 speedup is 22.95 building file list ... done mmtbx/ mmtbx/command_line/ mmtbx/regression/ mmtbx/regression/command_line/ mmtbx/regression/command_line/tst_find_residue_in_pdb.py sent 5,083 bytes received 47 bytes 10,260.00 bytes/sec total size is 708,795 speedup is 138.17 building file list ... done sent 70 bytes received 12 bytes 164.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done rstbx/ rstbx/command_line/ sent 782 bytes received 22 bytes 1,608.00 bytes/sec total size is 11,108 speedup is 13.82 building file list ... done scitbx/ scitbx/command_line/ scitbx/command_line/apply_tapenade_hints.py scitbx/command_line/generate_error_h.py scitbx/command_line/histogram.py scitbx/command_line/show_exp_times.py scitbx/command_line/show_sizes.py scitbx/command_line/unicode_examples.py sent 11,726 bytes received 136 bytes 23,724.00 bytes/sec total size is 9,958 speedup is 0.84 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/command_line/ sent 890 bytes received 22 bytes 1,824.00 bytes/sec total size is 37,436 speedup is 41.05 building file list ... done spotfinder/ spotfinder/command_line/ sent 520 bytes received 22 bytes 1,084.00 bytes/sec total size is 22,750 speedup is 41.97 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done wxtbx/ wxtbx/command_line/ sent 463 bytes received 22 bytes 970.00 bytes/sec total size is 16,078 speedup is 33.15 building file list ... done sent 250 bytes received 12 bytes 524.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/graph/ boost_adaptbx/graph/tests/ boost_adaptbx/graph/tests/tst_graph.py boost_adaptbx/graph/tests/tst_graph_breadth_first_search.py boost_adaptbx/graph/tests/tst_graph_clustering_algorithm.py boost_adaptbx/graph/tests/tst_graph_connected_component_algorithm.py boost_adaptbx/graph/tests/tst_graph_graph_structure_comparison.py boost_adaptbx/graph/tests/tst_graph_maximum_clique.py boost_adaptbx/graph/tests/tst_graph_metric.py boost_adaptbx/graph/tests/tst_graph_min_cut_max_flow.py boost_adaptbx/graph/tests/tst_graph_minimum_cut_enumerate.py boost_adaptbx/graph/tests/tst_graph_utility.py boost_adaptbx/tests/ boost_adaptbx/tests/tst_boost_thread.py boost_adaptbx/tests/tst_char_array.py boost_adaptbx/tests/tst_deprecation_tools.py boost_adaptbx/tests/tst_libc_backtrace.py boost_adaptbx/tests/tst_optional.py boost_adaptbx/tests/tst_optional_copy.cpp boost_adaptbx/tests/tst_optional_copy.h boost_adaptbx/tests/tst_python_streambuf.py boost_adaptbx/tests/tst_rational.py boost_adaptbx/tests/tst_std_pair.py boost_adaptbx/tests/tst_stderr_stdout.py boost_adaptbx/tests/tst_stdin.py boost_adaptbx/tests/tst_stdout.py boost_adaptbx/tests/tst_string_representation.py boost_adaptbx/tests/tst_swig_args.py boost_adaptbx/tests/tst_tuple.py sent 91,629 bytes received 515 bytes 184,288.00 bytes/sec total size is 89,657 speedup is 0.97 building file list ... done cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/tst_memory.cpp sent 1,199 bytes received 34 bytes 2,466.00 bytes/sec total size is 967 speedup is 0.78 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/tst_fftlib.py sent 7,597 bytes received 44 bytes 15,282.00 bytes/sec total size is 9,205 speedup is 1.20 building file list ... done cctbx/adp_restraints/ cctbx/adptbx/ cctbx/adptbx/boost_python/ cctbx/adptbx/boost_python/tst_adptbx.py cctbx/adptbx/boost_python/tst_hirshfeld.py cctbx/array_family/ cctbx/array_family/boost_python/ cctbx/array_family/boost_python/tst_flex.py cctbx/covariance/ cctbx/covariance/tests/ cctbx/covariance/tests/tst_covariance.py cctbx/crystal/ cctbx/development/ cctbx/dispersion/ cctbx/dispersion/tests/ cctbx/dispersion/tests/tst_kramers_kronig.py cctbx/dispersion/tests/tst_kramers_kronig_helper.py cctbx/dispersion/tests/tst_kramers_kronig_optimize.py cctbx/dmtbx/ cctbx/dmtbx/boost_python/ cctbx/dmtbx/boost_python/tst_dmtbx.py cctbx/eltbx/ cctbx/eltbx/discamb/ cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_1.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_2.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_3.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_4.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_5.py cctbx/eltbx/tests/ cctbx/eltbx/tests/tst_attenuation_coefficient.py cctbx/eltbx/tests/tst_chemical_elements.py cctbx/eltbx/tests/tst_covalent_radii.py cctbx/eltbx/tests/tst_formula.py cctbx/eltbx/tests/tst_henke.py cctbx/eltbx/tests/tst_icsd_radii.py cctbx/eltbx/tests/tst_neutron.py cctbx/eltbx/tests/tst_sasaki.py cctbx/eltbx/tests/tst_tiny_pse.py cctbx/eltbx/tests/tst_wavelengths.py cctbx/eltbx/tests/tst_xray_scattering.py cctbx/examples/ cctbx/examples/merging/ cctbx/geometry/ cctbx/geometry/tests/ cctbx/geometry/tests/tst_geometry.py cctbx/geometry_restraints/ cctbx/maptbx/ cctbx/maptbx/boost_python/ cctbx/maptbx/boost_python/tst_maptbx.py cctbx/masks/ cctbx/masks/tests/ cctbx/masks/tests/tst_flood_fill.py cctbx/math/ cctbx/math/boost_python/ cctbx/math/boost_python/tst_math.py cctbx/miller/ cctbx/miller/boost_python/ cctbx/miller/boost_python/tst_miller.py cctbx/multipolar/ cctbx/multipolar/regression/ cctbx/multipolar/regression/tst_multipolar.py cctbx/omz/ cctbx/omz/tst_cod.csh cctbx/regression/ cctbx/sgtbx/ cctbx/sgtbx/boost_python/ cctbx/sgtbx/boost_python/tst_N_fold_rot.py cctbx/sgtbx/boost_python/tst_sgtbx.py cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cctbx/symmetry_search/ cctbx/symmetry_search/tests/ cctbx/symmetry_search/tests/tst_from_map.py cctbx/symmetry_search/tests/tst_goodness_of_symmetry.py cctbx/translation_search/ cctbx/translation_search/boost_python/ cctbx/translation_search/boost_python/tst_translation_search.py cctbx/uctbx/ cctbx/uctbx/boost_python/ cctbx/uctbx/boost_python/tst_crystal_orientation.py cctbx/uctbx/boost_python/tst_uctbx.py cctbx/uctbx/lrl/ cctbx/uctbx/lrl/tst_match_lattices.py cctbx/xray/ cctbx/xray/boost_python/ cctbx/xray/boost_python/tst_f_model.py cctbx/xray/boost_python/tst_targets_fd.py cctbx/xray/boost_python/tst_xray.py cctbx/xray/observations/ cctbx/xray/targets/ sent 465,146 bytes received 977 bytes 932,246.00 bytes/sec total size is 2,082,452 speedup is 4.47 building file list ... done cma_es/ sent 112 bytes received 19 bytes 262.00 bytes/sec total size is 3,008 speedup is 22.96 building file list ... done crys3d/regression/ sent 388 bytes received 15 bytes 806.00 bytes/sec total size is 41,841 speedup is 103.82 building file list ... done sent 671 bytes received 12 bytes 1,366.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done fable/test/ fable/test/tst_command_line.py fable/test/tst_io.py fable/test/tst_separate_files.py fable/test/tst_show_calls.py sent 12,925 bytes received 91 bytes 26,032.00 bytes/sec total size is 151,869 speedup is 11.67 building file list ... done sent 224 bytes received 12 bytes 472.00 bytes/sec total size is 8,108 speedup is 34.36 building file list ... done iotbx/bioinformatics/ iotbx/bioinformatics/test/ iotbx/bioinformatics/test/tst_alignment_as_hsearch.py iotbx/bioinformatics/test/tst_ebi_wu_blast_xml.py iotbx/bioinformatics/test/tst_local_blast.py iotbx/bioinformatics/test/tst_ncbi_blast_xml.py iotbx/ccp4_map/ iotbx/ccp4_map/tst_input.map iotbx/cif/ iotbx/cif/tests/ iotbx/cif/tests/tst_citations.py iotbx/cif/tests/tst_cod.py iotbx/cif/tests/tst_crystal_symmetry_builder.py iotbx/cif/tests/tst_geometry.py iotbx/cif/tests/tst_lex_parse_build.py iotbx/cif/tests/tst_model.py iotbx/cif/tests/tst_model_builder.py iotbx/cif/tests/tst_parser.py iotbx/cif/tests/tst_restraints.py iotbx/cif/tests/tst_ucif_examples_compilation.py iotbx/cif/tests/tst_validation.py iotbx/cns/ iotbx/detectors/ iotbx/dsn6/ iotbx/examples/ iotbx/examples/pdb_truncate_to_ala/ iotbx/examples/pdb_truncate_to_ala/tst.py iotbx/gui_tools/ iotbx/kriber/ iotbx/mtz/ iotbx/pdb/ iotbx/pdb/remediation/ iotbx/regression/ iotbx/regression/ncs/ iotbx/regression/secondary_structure/ iotbx/regression/secondary_structure/tst_annotation.py iotbx/regression/secondary_structure/tst_annotation_long.py iotbx/regression/secondary_structure/tst_sheet.py iotbx/scalepack/ iotbx/shelx/ iotbx/xds/ iotbx/xds/tests/ iotbx/xds/tests/tst_integrate_hkl.py iotbx/xds/tests/tst_spots_xds.py iotbx/xds/tests/tst_xds_inp.py iotbx/xds/tests/tst_xparm.py iotbx/xplor/ sent 276,465 bytes received 541 bytes 184,670.67 bytes/sec total size is 2,463,857 speedup is 8.89 building file list ... done libtbx/phil/ libtbx/queuing_system_utils/ sent 1,276 bytes received 18 bytes 2,588.00 bytes/sec total size is 252,704 speedup is 195.29 building file list ... done mmtbx/atomic_environment_vectors/ mmtbx/building/ mmtbx/building/ligands/ mmtbx/building/ligands/tst_00_mmtbx_building_ligands.map mmtbx/bulk_solvent/ mmtbx/chemical_components/ mmtbx/conformation_dependent_library/ mmtbx/density_modification/ mmtbx/disorder/ mmtbx/dynamics/ mmtbx/geometry/ mmtbx/geometry/tests/ mmtbx/geometry/tests/tst_altloc.py mmtbx/geometry/tests/tst_asa.py mmtbx/geometry/tests/tst_clash.py mmtbx/geometry/tests/tst_indexing.py mmtbx/geometry/tests/tst_shared_types.py mmtbx/geometry/tests/tst_sphere_surface_sampling.py mmtbx/geometry/tests/tst_topology.py mmtbx/geometry_restraints/ mmtbx/geometry_restraints/torsion_restraints/ mmtbx/hydrogens/ mmtbx/ias/ mmtbx/idealized_aa_residues/ mmtbx/ions/ mmtbx/ions/svm/ mmtbx/ligands/ mmtbx/maps/ mmtbx/masks/ mmtbx/masks/tst_mask.cpp mmtbx/max_lik/ mmtbx/monomer_library/ mmtbx/nci/ mmtbx/pair_interaction/ mmtbx/polygon/ mmtbx/probe/ mmtbx/probe/tst_probe.cpp mmtbx/real_space/ mmtbx/reduce/ mmtbx/refinement/ mmtbx/refinement/real_space/ mmtbx/regression/fix_cablam/ mmtbx/regression/fix_cablam/tst_basic_cl_operations.py mmtbx/regression/fix_cablam/tst_insertion_codes.py mmtbx/regression/fix_cablam/tst_one_resid_rotation.py mmtbx/regression/fix_cablam/tst_single_outliers_surroundings.py mmtbx/regression/model/ mmtbx/regression/model_idealization/ mmtbx/regression/model_idealization/tst_ext_map_01.py mmtbx/regression/model_idealization/tst_ligands.py mmtbx/regression/model_idealization/tst_nomap_01.py mmtbx/regression/model_idealization/tst_nomap_02.py mmtbx/regression/model_idealization/tst_nomap_03.py mmtbx/regression/model_idealization/tst_nomap_04.py mmtbx/regression/model_idealization/tst_with_mtz.py mmtbx/regression/model_idealization/tst_withmap_01.py mmtbx/regression/model_idealization/tst_withmap_02.py mmtbx/regression/model_idealization/tst_withmap_03.py mmtbx/regression/model_idealization/tst_withmap_04.py mmtbx/regression/model_idealization/tst_withmap_05.py mmtbx/regression/model_idealization/tst_withmap_06.py mmtbx/regression/mtz/ mmtbx/regression/mtz/tst_xtriage_fmodel.mtz mmtbx/regression/ncs/ mmtbx/regression/pdb_interpretation/ mmtbx/regression/pdb_interpretation/tst_custom_nb_sym_excl.py mmtbx/regression/pdb_interpretation/tst_edits.py mmtbx/regression/pdb_interpretation/tst_edits_actions.py mmtbx/regression/pdb_interpretation/tst_tardy_geo.py mmtbx/regression/pdb_interpretation/tst_using_ncs_1.py mmtbx/regression/pdb_interpretation/tst_using_ncs_2.py mmtbx/regression/real_space_refine_chain/ mmtbx/regression/real_space_refine_chain/tst_00.py mmtbx/regression/real_space_refine_chain/tst_01.py mmtbx/regression/tls/ mmtbx/regression/tncs/ mmtbx/regression/tncs/tst_epsfac_and_radius.py mmtbx/regression/tncs/tst_fd.py mmtbx/regression/tncs/tst_moments.py mmtbx/regression/tncs/tst_pair.py mmtbx/ringer/ mmtbx/rotamer/ mmtbx/rsr/ mmtbx/scaling/ mmtbx/secondary_structure/ mmtbx/secondary_structure/build/ mmtbx/utils/ mmtbx/validation/ mmtbx/validation/regression/ mmtbx/wwpdb/ sent 819,318 bytes received 930 bytes 1,640,496.00 bytes/sec total size is 7,316,132 speedup is 8.92 building file list ... done omptbx/ sent 95 bytes received 19 bytes 228.00 bytes/sec total size is 1,175 speedup is 10.31 building file list ... done rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/cftbx/ rstbx/diffraction/ rstbx/diffraction/fastbragg/ rstbx/dps_core/ rstbx/indexing/ rstbx/simage/ rstbx/simulation/ rstbx/sublattice_support/ rstbx/viewer/ sent 1,051 bytes received 45 bytes 2,192.00 bytes/sec total size is 179,407 speedup is 163.69 building file list ... done scitbx/array_family/ scitbx/array_family/tst_accessors.cpp scitbx/array_family/tst_af_1.cpp scitbx/array_family/tst_af_2.cpp scitbx/array_family/tst_af_3.cpp scitbx/array_family/tst_af_4.cpp scitbx/array_family/tst_af_5.cpp scitbx/array_family/tst_af_helpers.cpp scitbx/array_family/tst_mat3.cpp scitbx/array_family/tst_optional_copy.cpp scitbx/array_family/tst_rectangular_full_packed.cpp scitbx/array_family/tst_ref_matrix_facet.cpp scitbx/array_family/tst_sym_mat3.cpp scitbx/array_family/tst_unsigned_float_arithmetic.cpp scitbx/array_family/tst_vec3.cpp scitbx/array_family/boost_python/ scitbx/array_family/boost_python/tst_cost_of_m_handle_in_af_shared.py scitbx/array_family/boost_python/tst_flex.py scitbx/array_family/boost_python/tst_flex_argument_passing.py scitbx/array_family/boost_python/tst_integer_offsets_vs_pointers.py scitbx/array_family/boost_python/tst_numpy_bridge.py scitbx/array_family/boost_python/tst_shared.py scitbx/array_family/boost_python/tst_smart_selection.py scitbx/dtmin/ scitbx/dtmin/regression/ scitbx/dtmin/regression/tst_dtmin_basic.py scitbx/dtmin/regression/tst_dtmin_booth.py scitbx/dtmin/regression/tst_dtmin_twisted.py scitbx/error/ scitbx/error/tst_error.cpp scitbx/error/tst_error.py scitbx/fftpack/ scitbx/fftpack/boost_python/ scitbx/fftpack/boost_python/tst_fftpack.py scitbx/fftpack/timing/ scitbx/fftpack/timing/tst3d.cpp scitbx/glmtbx/ scitbx/glmtbx/tests/ scitbx/glmtbx/tests/tst.py scitbx/graph/ scitbx/graphics_utils/ scitbx/iso_surface/ scitbx/iso_surface/tst_iso_surface.m scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs.cpp scitbx/lbfgsb/ scitbx/lbfgsb/boost_python/ scitbx/lbfgsb/boost_python/tst_fit_cdf.py scitbx/lbfgsb/boost_python/tst_lbfgsb.py scitbx/linalg/ scitbx/linalg/tests/ scitbx/linalg/tests/tst_cholesky.py scitbx/linalg/tests/tst_eigensystem.py scitbx/linalg/tests/tst_lapack_dsyev.py scitbx/linalg/tests/tst_lapack_svd.py scitbx/linalg/tests/tst_matrix.py scitbx/linalg/tests/tst_svd.py scitbx/lstbx/ scitbx/lstbx/tests/ scitbx/lstbx/tests/tst_normal_equations.nb scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst.cpp scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky.cpp scitbx/matrix/tests/tst_givens.cpp scitbx/matrix/tests/tst_householder.cpp scitbx/matrix/tests/tst_householder.nb scitbx/matrix/tests/tst_householder.py scitbx/matrix/tests/tst_row_echelon.py scitbx/matrix/tests/tst_svd.cpp scitbx/matrix/tests/tst_svd.nb scitbx/matrix/tests/tst_svd_accuracy.nb scitbx/minpack/ scitbx/minpack/tst.py scitbx/python_utils/ scitbx/random/ scitbx/random/tests/ scitbx/random/tests/tst_random.py scitbx/rigid_body/ scitbx/rigid_body/essence/ scitbx/rigid_body/proto/ scitbx/serialization/ scitbx/serialization/tst_base_256.cpp scitbx/sparse/ scitbx/sparse/tests/ scitbx/sparse/tests/tst_lu_factorization.py scitbx/sparse/tests/tst_sparse.cpp scitbx/sparse/tests/tst_sparse.py scitbx/stl/ scitbx/suffixtree/ scitbx/suffixtree/test/ scitbx/suffixtree/test/tst_single.py scitbx/tests/ scitbx/tests/tst_basic.csh scitbx/tests/tst_basic.py scitbx/tests/tst_cubicle_neighbors.py scitbx/tests/tst_genetic_algorithm_with_mp.py scitbx/tests/tst_minimizer_lbfgs_general.py scitbx/tests/tst_r3_utils.py scitbx/tests/tst_regular_grid_on_unit_sphere.py scitbx/tests/tst_smoothing.py scitbx/wigner/ sent 678,819 bytes received 1,368 bytes 1,360,374.00 bytes/sec total size is 1,112,037 speedup is 1.63 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ab_initio/ smtbx/ab_initio/tests/ smtbx/absolute_structure/ smtbx/absolute_structure/tests/ smtbx/absolute_structure/tests/tst_absolute_structure.py smtbx/masks/ smtbx/masks/tests/ smtbx/masks/tests/tst_masks.py smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp smtbx/refinement/constraints/tests/tst_reparametrisation.cpp smtbx/refinement/constraints/tests/tst_special_position.cpp smtbx/refinement/restraints/ smtbx/refinement/restraints/tests/ smtbx/refinement/restraints/tests/tst_adp_restraints.py smtbx/refinement/restraints/tests/tst_manager.py smtbx/refinement/restraints/tests/tst_restraints.py smtbx/refinement/tests/ smtbx/refinement/tests/tst_least_squares.py smtbx/refinement/tests/tst_weighting_schemes.py smtbx/regression/ smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/tests/ smtbx/structure_factors/direct/tests/tst_standard_xray.py smtbx/tests/ smtbx/tests/tst_utils.py sent 144,562 bytes received 291 bytes 289,706.00 bytes/sec total size is 248,243 speedup is 1.71 building file list ... done spotfinder/core_toolbox/ spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/tst_small_image.py sent 5,470 bytes received 37 bytes 11,014.00 bytes/sec total size is 5,074 speedup is 0.92 building file list ... done tbxx/ tbxx/tests/ tbxx/tests/tst_pretty_type_name.cpp sent 493 bytes received 41 bytes 1,068.00 bytes/sec total size is 323 speedup is 0.60 building file list ... done wxtbx/regression/ wxtbx/regression/tst_process_control.py sent 2,009 bytes received 34 bytes 4,086.00 bytes/sec total size is 1,770 speedup is 0.87 building file list ... done ./ annlib_adaptbx/ annlib_adaptbx/tests/ annlib_adaptbx/tests/data.txt annlib_adaptbx/tests/query.txt cma_es/cma/ cma_es/cma/initials.par fable/fem/ fable/fem/major_types.hpp fable/test/sf_times.py fable/test/lenient/ fable/test/lenient/NOTE fable/test/lenient/calling_non_external_arg.f fable/test/lenient/str_blank_str.f fable/test/lenient/str_cont_line_str.f fable/test/semantic_error/ fable/test/semantic_error/assignment_to_parameter.f fable/test/semantic_error/calling_array.f fable/test/semantic_error/calling_dimension.f fable/test/semantic_error/common_equivalence.f fable/test/semantic_error/dimension_unknown_data_type.f fable/test/semantic_error/dims_repeated_in_common.f fable/test/semantic_error/dims_repeated_in_dimension.f fable/test/semantic_error/equivalence_external.f fable/test/semantic_error/external_array.f fable/test/semantic_error/external_common.f fable/test/semantic_error/function_data_type_decl_twice.f fable/test/semantic_error/function_name_is_also_arg.f fable/test/semantic_error/inquire_both_unit_and_file.f fable/test/semantic_error/inquire_no_unit_no_file.f fable/test/semantic_error/intrinsic_common.f fable/test/semantic_error/intrinsic_dimension.f fable/test/semantic_error/missing_include.f fable/test/semantic_error/parameter_array.f fable/test/semantic_error/parameter_in_common.f fable/test/semantic_error/parameter_in_sub_args.f fable/test/semantic_error/parameter_save.f fable/test/semantic_error/real_declared_twice.f fable/test/semantic_error/recursion_in_declaration.f fable/test/semantic_error/sub_fun_2.f fable/test/semantic_error/subroutine_name_is_also_arg.f fable/test/semantic_error/twice_in_sub_args.f fable/test/semantic_error/unknown_intrinsic.f fable/test/semantic_error/write_end.f fable/test/semantic_error/write_without_unit.f fable/test/syntax_error/ fable/test/syntax_error/bad_after_dot.f fable/test/syntax_error/bad_and.f fable/test/syntax_error/bad_complex_literal_1.f fable/test/syntax_error/bad_complex_literal_2.f fable/test/syntax_error/bad_data.f fable/test/syntax_error/bad_false.f fable/test/syntax_error/bad_format_1.f fable/test/syntax_error/bad_format_2.f fable/test/syntax_error/bad_format_3.f fable/test/syntax_error/bad_format_4.f fable/test/syntax_error/bad_format_5.f fable/test/syntax_error/bad_format_6.f fable/test/syntax_error/bad_format_7.f fable/test/syntax_error/bad_gt.f fable/test/syntax_error/bad_implied_do_1.f fable/test/syntax_error/bad_implied_do_2.f fable/test/syntax_error/bad_implied_do_3.f fable/test/syntax_error/bad_implied_do_4.f fable/test/syntax_error/bad_implied_do_5.f fable/test/syntax_error/bad_implied_do_6.f fable/test/syntax_error/bad_not.f fable/test/syntax_error/bad_not_2.f fable/test/syntax_error/bad_open_err_label.f fable/test/syntax_error/bad_or.f fable/test/syntax_error/bad_true.f fable/test/syntax_error/bare_data.f fable/test/syntax_error/bare_external.f fable/test/syntax_error/bare_integer_i.f fable/test/syntax_error/bare_print.f fable/test/syntax_error/closing_parenthesis_without_matching.f fable/test/syntax_error/common_with_data_size.f fable/test/syntax_error/data_plus_repetition.f fable/test/syntax_error/dimension_with_data_size.f fable/test/syntax_error/dot_e.f fable/test/syntax_error/duplicate_format_label.f fable/test/syntax_error/exclamation_mark_syndrome.f fable/test/syntax_error/format_without_label.f fable/test/syntax_error/fun_star.f fable/test/syntax_error/j_assign_i_percent_5.f fable/test/syntax_error/label_cont_char.f fable/test/syntax_error/label_empty.f fable/test/syntax_error/not_an_identifier.f fable/test/syntax_error/opening_parenthesis_without_matching.f fable/test/syntax_error/power_no_base.f fable/test/syntax_error/power_no_exponent.f fable/test/syntax_error/read_plus_name.f fable/test/syntax_error/read_star_comma_empty.f fable/test/syntax_error/read_star_name.f fable/test/syntax_error/save_bad_comma.f fable/test/syntax_error/save_num_comma_colon.f fable/test/syntax_error/save_num_val_colon.f fable/test/syntax_error/save_slash_slash.f fable/test/syntax_error/save_with_dims.f fable/test/syntax_error/sub_bad_comma.f fable/test/syntax_error/sub_bad_trailing.f fable/test/syntax_error/sub_no_name.f fable/test/syntax_error/sub_open_parenthesis.f fable/test/syntax_error/sub_percent_3.f fable/test/syntax_error/x_assign_1dotd.f fable/test/syntax_error/x_assign_1ex.f fable/test/syntax_error/x_assign_dot.f fable/test/syntax_error/x_assign_dot_2.f fable/test/unsupported/ fable/test/unsupported/goto_into_loop.f fable/test/unsupported/hollerith_cont_lines.f fable/test/unsupported/hollerith_with_quotes.f fable/test/unsupported/parameter_pow.f fable/test/valid/ fable/test/valid/add_dp_integer.f fable/test/valid/add_real_integer.f fable/test/valid/add_reals.f fable/test/valid/add_strings.f fable/test/valid/arr_float_2.f fable/test/valid/array_origin.f fable/test/valid/assign_to_array_elements.f fable/test/valid/blockdata_named.f fable/test/valid/blockdata_unnamed.f fable/test/valid/character_1_array_passing.f fable/test/valid/character_1_f90.f fable/test/valid/character_function.f fable/test/valid/character_function_2.f fable/test/valid/character_function_3.f fable/test/valid/combine_decl_1.f fable/test/valid/comments.f fable/test/valid/common_0.f fable/test/valid/common_1.f fable/test/valid/common_2.f fable/test/valid/common_3.f fable/test/valid/common_4.f fable/test/valid/common_equivalence_1.f fable/test/valid/common_equivalence_2.f fable/test/valid/common_equivalence_3.f fable/test/valid/common_equivalence_4.f fable/test/valid/common_equivalence_5.f fable/test/valid/common_equivalence_simple_1.f fable/test/valid/common_equivalence_simple_2.f fable/test/valid/common_equivalence_simple_3.f fable/test/valid/common_equivalence_simple_4.f fable/test/valid/common_equivalence_simple_5.f fable/test/valid/common_equivalence_simple_6.f fable/test/valid/common_name_clash.f fable/test/valid/common_name_clash_2.f fable/test/valid/common_name_clash_3.f fable/test/valid/common_save_members.f fable/test/valid/common_variants.f fable/test/valid/commonymous.f fable/test/valid/const_analysis_1.f fable/test/valid/const_analysis_2.f fable/test/valid/const_expressions.f fable/test/valid/const_expressions_2.f fable/test/valid/conv_recipe.f fable/test/valid/cycle_exit.f fable/test/valid/data_01.f fable/test/valid/data_02.f fable/test/valid/data_03.f fable/test/valid/data_04.f fable/test/valid/data_05.f fable/test/valid/data_06.f fable/test/valid/data_07.f fable/test/valid/data_08.f fable/test/valid/data_09.f fable/test/valid/data_10.f fable/test/valid/data_11.f fable/test/valid/data_12.f fable/test/valid/data_13.f fable/test/valid/data_14.f fable/test/valid/data_15.f fable/test/valid/data_16.f fable/test/valid/data_17.f fable/test/valid/data_18.f fable/test/valid/data_19.f fable/test/valid/data_20.f fable/test/valid/data_21.f fable/test/valid/data_22.f fable/test/valid/data_23.f fable/test/valid/data_24.f fable/test/valid/data_25.f fable/test/valid/data_26.f fable/test/valid/data_27.f fable/test/valid/data_28.f fable/test/valid/data_29.f fable/test/valid/data_30.f fable/test/valid/data_31.f fable/test/valid/data_32.f fable/test/valid/data_byte.f fable/test/valid/data_double_from_double_and_float.f fable/test/valid/data_str_arr.f fable/test/valid/data_type_star.f fable/test/valid/data_types.f fable/test/valid/decl_before_if.f fable/test/valid/dependency_cycle.f fable/test/valid/dim_with_parameter.f fable/test/valid/dimensions.f fable/test/valid/do_enddo.f fable/test/valid/do_ix_num.f fable/test/valid/do_label.f fable/test/valid/do_variable_passed.f fable/test/valid/do_while.f fable/test/valid/doc_data_type_star.f fable/test/valid/double_literal.f fable/test/valid/dp_example.f fable/test/valid/dynamic_parameters_1.f fable/test/valid/dynamic_parameters_2.f fable/test/valid/dynamic_parameters_3.f fable/test/valid/dynamic_parameters_4.f fable/test/valid/dynamic_parameters_5.f fable/test/valid/entry_fun_1.f fable/test/valid/entry_fun_2.f fable/test/valid/entry_sub_1.f fable/test/valid/entry_sub_2.f fable/test/valid/equivalence_01.f fable/test/valid/equivalence_02.f fable/test/valid/equivalence_03.f fable/test/valid/equivalence_04.f fable/test/valid/equivalence_05.f fable/test/valid/equivalence_06.f fable/test/valid/equivalence_07.f fable/test/valid/equivalence_08.f fable/test/valid/equivalence_09.f fable/test/valid/equivalence_10.f fable/test/valid/equivalence_11.f fable/test/valid/equivalence_12.f fable/test/valid/equivalence_data.f fable/test/valid/equivalence_mixed.f fable/test/valid/equivalence_repeated.f fable/test/valid/external_arg_function.f fable/test/valid/external_arg_layers.f fable/test/valid/external_arg_non_const.f fable/test/valid/external_arg_pass_call.f fable/test/valid/external_arg_simple.f fable/test/valid/external_arg_subroutine.f fable/test/valid/f90_ne_token.f fable/test/valid/file_names_and_expected_cout fable/test/valid/flush_external.f fable/test/valid/flush_intrinsic.f fable/test/valid/format_escape.f fable/test/valid/format_nested.f fable/test/valid/format_quote_syndrome.f fable/test/valid/format_str_blank_str.f fable/test/valid/format_used_twice.f fable/test/valid/formats.f fable/test/valid/function_calls_with_its_name_as_arg.f fable/test/valid/function_data_type_in_body.f fable/test/valid/function_no_arg.f fable/test/valid/function_no_arg_with_common_in_expression.f fable/test/valid/function_two_returns_1.f fable/test/valid/function_two_returns_2.f fable/test/valid/function_write.f fable/test/valid/goto_computed.f fable/test/valid/goto_forms.f fable/test/valid/goto_last_do.f fable/test/valid/goto_spaghetti.f fable/test/valid/goto_target_before_else.f fable/test/valid/hexadecimal.f fable/test/valid/hollerith.f fable/test/valid/identifier_prefix.f fable/test/valid/if_arithmetic.f fable/test/valid/if_cond_if_arithmetic.f fable/test/valid/if_else_endif.f fable/test/valid/if_elseif_else_endif.f fable/test/valid/if_endif.f fable/test/valid/if_spaghetti.f fable/test/valid/if_write.f fable/test/valid/implicit_integer_a.f fable/test/valid/implicit_ranges.f fable/test/valid/implied_external_arg_sub.f fable/test/valid/implied_external_arg_sub_2.f fable/test/valid/implied_program.f fable/test/valid/implied_trailing_program.f fable/test/valid/inquire.f fable/test/valid/inquire_opened.f fable/test/valid/int_literal_eq_int_literal.f fable/test/valid/integer_star_2_array.f fable/test/valid/intrinsic_with_data_type.f fable/test/valid/intrinsics_extra.f fable/test/valid/intrinsics_iargc_getarg.f fable/test/valid/intrinsics_legacy.f fable/test/valid/label_format.f fable/test/valid/len_trim.f fable/test/valid/logical_a_or_b.f fable/test/valid/logical_ops.f fable/test/valid/long_lines.f fable/test/valid/main_cmn_indirect.f fable/test/valid/mod_integers.f fable/test/valid/open_chain.f fable/test/valid/open_write_read.f fable/test/valid/open_write_read_2.f fable/test/valid/ops.f fable/test/valid/parameter_for_arg_and_cmn_dim.f fable/test/valid/parameter_n.f fable/test/valid/parameter_save.f fable/test/valid/parameter_save_common.f fable/test/valid/parameters_2.f fable/test/valid/parameters_recursive.f fable/test/valid/parameters_recursive_2.f fable/test/valid/passing_arrays.f fable/test/valid/passing_arrays_2.f fable/test/valid/passing_strings.f fable/test/valid/power.f fable/test/valid/power_2.f fable/test/valid/print.f fable/test/valid/read_end.f fable/test/valid/read_end_empty.f fable/test/valid/read_end_err.f fable/test/valid/read_end_err_star_double.f fable/test/valid/read_err.f fable/test/valid/read_fmt_double.f fable/test/valid/read_fmt_past_end_of_line.f fable/test/valid/read_fmt_real.f fable/test/valid/read_fmt_slash.f fable/test/valid/read_fmt_string.f fable/test/valid/read_fmt_x.f fable/test/valid/read_format.f fable/test/valid/read_implied_do_1.f fable/test/valid/read_iostat_end_err_1.f fable/test/valid/read_iostat_end_err_2.f fable/test/valid/read_iostat_from_file.f fable/test/valid/read_iostat_from_string.f fable/test/valid/read_lines.f fable/test/valid/read_rec_iostat.f fable/test/valid/read_star.f fable/test/valid/read_star_empty.f fable/test/valid/read_star_integer.f fable/test/valid/read_star_print_star.f fable/test/valid/read_test_1.f fable/test/valid/read_test_1_iostat.f fable/test/valid/read_test_2.f fable/test/valid/read_test_3.f fable/test/valid/read_unformatted_str_arr.f fable/test/valid/real_array_sum.f fable/test/valid/recursive_subroutine.f fable/test/valid/rewind.f fable/test/valid/save_0.f fable/test/valid/save_1.f fable/test/valid/save_2.f fable/test/valid/save_3.f fable/test/valid/save_equivalence_1.f fable/test/valid/scopes_1.f fable/test/valid/scopes_2.f fable/test/valid/scopes_3.f fable/test/valid/scopes_4.f fable/test/valid/sf.f fable/test/valid/sign.f fable/test/valid/stop_bare.f fable/test/valid/stop_integer.f fable/test/valid/stop_string.f fable/test/valid/string_array.f fable/test/valid/string_array_declarations.f fable/test/valid/string_assign_to_slice.f fable/test/valid/string_common_dims.f fable/test/valid/string_compare.f fable/test/valid/string_concat.f fable/test/valid/string_spanning_continuation_lines.f fable/test/valid/string_sub_array_passing.f fable/test/valid/strings_size_dim.f fable/test/valid/strings_size_dim_data.f fable/test/valid/sub_fun_1.f fable/test/valid/sub_fun_3.f fable/test/valid/sub_nums_size_capacity.f fable/test/valid/sub_star.f fable/test/valid/subroutine_1.f fable/test/valid/subroutine_2.f fable/test/valid/subroutine_3.f fable/test/valid/subroutine_4.f fable/test/valid/subroutine_5.f fable/test/valid/subroutine_6.f fable/test/valid/subroutine_7.f fable/test/valid/subroutine_8.f fable/test/valid/subroutine_9.f fable/test/valid/subroutine_write_iunit.f fable/test/valid/subroutine_zero.f fable/test/valid/tab_syndrome.f fable/test/valid/triple_3d.f fable/test/valid/triple_3d_common.f fable/test/valid/unformatted_experiments.f fable/test/valid/unused_arg_implicit_none.f fable/test/valid/unused_args.f fable/test/valid/using_intrinsics.f fable/test/valid/write_1.f fable/test/valid/write_err.f fable/test/valid/write_extra_parentheses.f fable/test/valid/write_fmt_double.f fable/test/valid/write_format.f fable/test/valid/write_format_with_colon.f fable/test/valid/write_implied_do_1.f fable/test/valid/write_implied_do_2.f fable/test/valid/write_implied_do_3.f fable/test/valid/write_implied_do_4.f fable/test/valid/write_implied_do_5.f fable/test/valid/write_internal_file.f fable/test/valid/write_internal_file_2.f fable/test/valid/write_internal_file_3.f fable/test/valid/write_internal_file_4.f fable/test/valid/write_pow.f fable/test/valid/write_read_end_err_implied_do.f fable/test/valid/write_read_unformatted.f fable/test/valid/write_star.f fable/test/valid/write_star_real_star_4.f fable/test/valid/write_star_real_star_8.f iotbx/bioinformatics/test/alignment.pir iotbx/bioinformatics/test/ebi_blast.xml.gz iotbx/bioinformatics/test/ncbi_blast.xml.gz iotbx/ccp4_map/ccp4_20_21_22_to_30_40_50.ccp4 iotbx/examples/pdb_truncate_to_ala/crambin_pieces.pdb iotbx/examples/pdb_truncate_to_ala/resname_mix.pdb iotbx/examples/pdb_truncate_to_ala/tutorial.txt iotbx/examples/pdb_truncate_to_ala/v0_getting_started.py iotbx/examples/pdb_truncate_to_ala/v1_loop_over_atoms.py iotbx/examples/pdb_truncate_to_ala/v2_simple.py iotbx/examples/pdb_truncate_to_ala/v3_better.py iotbx/examples/pdb_truncate_to_ala/v4_with_bells_and_whistles.py iotbx/regression/data/ iotbx/regression/data/1yjp.pdb iotbx/regression/data/2ERL.pdb iotbx/regression/data/D7.ccp4 iotbx/regression/data/big_cube_model.pdb iotbx/regression/data/cu3182Isup2.hkl iotbx/regression/data/cu3182sup1.cif iotbx/regression/data/insulin_unmerged_cutted_from_ccp4.mtz iotbx/regression/data/mmma.ccp4 iotbx/regression/data/mmmab.ccp4 iotbx/regression/data/mmmb.ccp4 iotbx/regression/data/non_zero_origin_map.ccp4 iotbx/regression/data/non_zero_origin_model.cif iotbx/regression/data/non_zero_origin_model.pdb iotbx/regression/data/non_zero_origin_model_split.cif iotbx/regression/data/non_zero_origin_model_split.pdb iotbx/regression/data/non_zero_origin_ncs_model.cif iotbx/regression/data/non_zero_origin_ncs_model.pdb iotbx/regression/data/non_zero_origin_ncs_spec.ncs_spec iotbx/regression/data/pdb1zff.ent iotbx/regression/data/phaser_1.mtz iotbx/regression/data/shelx.ins iotbx/xds/tests/INTEGRATE.HKL iotbx/xds/tests/NEW_XPARM.XDS iotbx/xds/tests/XDS.INP iotbx/xds/tests/XDS_2.INP iotbx/xds/tests/XPARM.XDS libtbx/citations.params mmtbx/regression/pdbs/ mmtbx/regression/pdbs/1ucs_cutted_xyz_rounded.pdb mmtbx/regression/pdbs/1yjp_h.pdb mmtbx/regression/pdbs/AF_json_v3.cif mmtbx/regression/pdbs/AF_json_v3.pdb mmtbx/regression/pdbs/Fe_1brf_snip_reduced.pdb mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.cif mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.pdb mmtbx/regression/pdbs/ligand_before_prot.pdb mmtbx/regression/pdbs/one_chain_ligand_water.pdb mmtbx/regression/pdbs/p9.pdb mmtbx/regression/pdbs/pae.pdb mmtbx/regression/pdbs/pae_model.cif mmtbx/regression/pdbs/pae_model.pdb mmtbx/regression/pdbs/test1.cif mmtbx/regression/pdbs/two_chains.pdb mmtbx/regression/pdbs/two_chains_ligand_water.pdb rstbx/indexing/results2.dat rstbx/indexing/si_brief.dat rstbx/indexing/si_synthetic.dat scitbx/array_family/boost_python/regression_test.py scitbx/tests/differential_evolution.py scitbx/tests/direct_search_simulated_annealing.py scitbx/tests/golden_section_search.py scitbx/tests/simplex.py smtbx/regression/test_data/ smtbx/regression/test_data/sucrose_p1.res smtbx/regression/test_data/thpp.cif smtbx/regression/test_data/thpp.hkl smtbx/regression/test_data/thpp.ins sent 5,033,348 bytes received 8,885 bytes 3,361,488.67 bytes/sec total size is 4,971,820 speedup is 0.99 make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_install -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0//usr/lib/riscv64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libcbf-private.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libccp4io.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libomptbx.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/librstbx.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/tmp/usr/lib/riscv64-linux-gnu/libspotfinder.so.0 debian/tmp/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0//usr/lib/riscv64-linux-gnu/ install -m0755 -d debian/libcctbx-dev//usr cp --reflink=auto -a debian/tmp/usr/include/ debian/libcctbx-dev//usr/ install -m0755 -d debian/libcctbx-dev//usr/lib/riscv64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/riscv64-linux-gnu/libann_adaptor.so debian/tmp/usr/lib/riscv64-linux-gnu/libasymmetric_map.so debian/tmp/usr/lib/riscv64-linux-gnu/libcbf-private.so debian/tmp/usr/lib/riscv64-linux-gnu/libccp4io.so debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx.so debian/tmp/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so debian/tmp/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so debian/tmp/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so debian/tmp/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so debian/tmp/usr/lib/riscv64-linux-gnu/libomptbx.so debian/tmp/usr/lib/riscv64-linux-gnu/librstbx.so debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so debian/tmp/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so debian/tmp/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so debian/tmp/usr/lib/riscv64-linux-gnu/libspotfinder.so debian/libcctbx-dev//usr/lib/riscv64-linux-gnu/ install -m0755 -d debian/python3-cctbx//usr cp --reflink=auto -a debian/tmp/usr/bin debian/python3-cctbx//usr/ install -m0755 -d debian/python3-cctbx//usr/lib cp --reflink=auto -a debian/tmp/usr/lib/cctbx debian/tmp/usr/lib/python3.13 debian/python3-cctbx//usr/lib/ dh_installdocs -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/copyright debian/libcctbx0/usr/share/doc/libcctbx0/copyright install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/copyright debian/libcctbx-dev/usr/share/doc/libcctbx-dev/copyright install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/copyright debian/python3-cctbx/usr/share/doc/python3-cctbx/copyright dh_installchangelogs -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/.debhelper/generated/python3-cctbx/dh_installchangelogs.dch.trimmed debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/.debhelper/generated/libcctbx0/dh_installchangelogs.dch.trimmed debian/libcctbx0/usr/share/doc/libcctbx0/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx0/usr/share/doc/libcctbx0/changelog install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/.debhelper/generated/libcctbx-dev/dh_installchangelogs.dch.trimmed debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250414 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=True, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:166: skipping package libcctbx0 (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:166: skipping package libcctbx-dev (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=cctbx, binary packages=['python3-cctbx'] D: dh_python3 dh_python3:205: processing package python3-cctbx... D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.13/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.13 -c 'import sysconfig as s; print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python3 fs:421: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_rational_ext.so to boost_rational_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_ext.so to dxtbx_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.ligand_restraints_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.development.xtrapol8): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.23.0.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-cctbx D: dh_python3 pydist:175: trying to find dependency for PIL (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for h5py (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for hdf5plugin (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for mrcfile (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for natsort (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for nxmx (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for ordered_set (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pint (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for procrunner (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pymol (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for requests (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for scipy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for six (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for tqdm (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for wxPython (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-matplotlib', 'python3-natsort', 'python3-procrunner', 'python3-mrcfile', 'python3-tqdm', 'python3-pymol', 'python3-hdf5plugin', 'python3-nxmx', 'python3-scipy', 'python3-wxgtk4.0', 'python3-numpy', 'python3 (<< 3.14)', 'python3:any', 'python3-six', 'python3-h5py (>= 3)', 'python3-ordered-set', 'python3-requests', 'python3-pil', 'python3 (>= 3.13~)', 'python3-pint'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides install -p -m0644 debian/python3-cctbx.lintian-overrides debian/python3-cctbx/usr/share/lintian/overrides/python3-cctbx dh_perl -a -O--buildsystem=pybuild rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" pybuild --build -i python{version} -p 3.13 -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" I: pybuild base:311: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.13/include rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libccp4io.so ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libccp4io.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libasymmetric_map.so ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libasymmetric_map.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libspotfinder.so ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libspotfinder.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libann_adaptor.so ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libann_adaptor.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libomptbx.so ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libomptbx.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcctbx.so ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcctbx.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcbf-private.so ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/libcbf-private.so rm -f debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/librstbx.so ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/riscv64-linux-gnu/librstbx.so install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.13 rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.13/include ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.13/include make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_strip_nondeterminism -a -O--buildsystem=pybuild Using 1761327529 as canonical time Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip dh_compress -a -O--buildsystem=pybuild cd debian/libcctbx0 cd debian/libcctbx-dev cd debian/python3-cctbx chmod a-x usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian chmod a-x usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian gzip -9nf usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_fixperms -a -O--buildsystem=pybuild find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-cctbx/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/lib/debug/.dwz/riscv64-linux-gnu dwz -mdebian/libcctbx0/usr/lib/debug/.dwz/riscv64-linux-gnu/libcctbx0.debug -M/usr/lib/debug/.dwz/riscv64-linux-gnu/libcctbx0.debug -- debian/libcctbx0/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/usr/lib/debug/.dwz/riscv64-linux-gnu dwz -mdebian/python3-cctbx/usr/lib/debug/.dwz/riscv64-linux-gnu/python3-cctbx.debug -M/usr/lib/debug/.dwz/riscv64-linux-gnu/python3-cctbx.debug -- debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so objcopy --compress-debug-sections debian/libcctbx0/usr/lib/debug/.dwz/riscv64-linux-gnu/libcctbx0.debug chmod 0644 -- debian/libcctbx0/usr/lib/debug/.dwz/riscv64-linux-gnu/libcctbx0.debug objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/riscv64-linux-gnu/python3-cctbx.debug chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/riscv64-linux-gnu/python3-cctbx.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5a/2fdbabf31a39dd2bc4318408eb068c56e01e6c.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/c014619947192312d3a98c241c9106eb0c75b3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/c014619947192312d3a98c241c9106eb0c75b3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fd/c014619947192312d3a98c241c9106eb0c75b3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/6aaf8157e56c3370e318fc6580af7039ba5d8b.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5a/2fdbabf31a39dd2bc4318408eb068c56e01e6c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/5a/2fdbabf31a39dd2bc4318408eb068c56e01e6c.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/6aaf8157e56c3370e318fc6580af7039ba5d8b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/6aaf8157e56c3370e318fc6580af7039ba5d8b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2e/85f235fd3af38d4d83c3235d63a1fa840bb0b7.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/8b389513841739e0696dc4ef99dea38deeb4b7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/8b389513841739e0696dc4ef99dea38deeb4b7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2e/85f235fd3af38d4d83c3235d63a1fa840bb0b7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/8b389513841739e0696dc4ef99dea38deeb4b7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/2e/85f235fd3af38d4d83c3235d63a1fa840bb0b7.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/227e2cc34ea1bde1a945e3b17815c14c31713d.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7a/8fe8566f98880b17f753c2389020df99e68460.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/227e2cc34ea1bde1a945e3b17815c14c31713d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/227e2cc34ea1bde1a945e3b17815c14c31713d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/a7e76546c19df38d9de166acb2efe3b1a64d72.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7a/8fe8566f98880b17f753c2389020df99e68460.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/7a/8fe8566f98880b17f753c2389020df99e68460.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e9 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e9/a27da85b13f39e4e0f943a4ce1ff7d3c53e1a3.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e9/a27da85b13f39e4e0f943a4ce1ff7d3c53e1a3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e9/a27da85b13f39e4e0f943a4ce1ff7d3c53e1a3.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/a7e76546c19df38d9de166acb2efe3b1a64d72.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/a7e76546c19df38d9de166acb2efe3b1a64d72.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/37 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/37/ce7005d0ed72626eead4d0cbb37214403ef61b.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/ac0daacb11e7262fa82ca52affcc73d26df921.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/37/ce7005d0ed72626eead4d0cbb37214403ef61b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/37/ce7005d0ed72626eead4d0cbb37214403ef61b.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1292dcea19b8c75bdd011d928d591cbe11e277.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1292dcea19b8c75bdd011d928d591cbe11e277.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b7/1292dcea19b8c75bdd011d928d591cbe11e277.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/23/b54bb7d48c846e4c21168155e2a31983b8b3ec.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/ac0daacb11e7262fa82ca52affcc73d26df921.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/84/ac0daacb11e7262fa82ca52affcc73d26df921.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/23/b54bb7d48c846e4c21168155e2a31983b8b3ec.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/23/b54bb7d48c846e4c21168155e2a31983b8b3ec.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/475c148fece831ed24d65f5dcf12951bd66e71.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4f/e138c5dbf615f7d6c872b6d3ccf679ad733b92.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4f/e138c5dbf615f7d6c872b6d3ccf679ad733b92.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/4f/e138c5dbf615f7d6c872b6d3ccf679ad733b92.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c9/a8e1143c8cea93688737144dae534a0565ece1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/475c148fece831ed24d65f5dcf12951bd66e71.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/475c148fece831ed24d65f5dcf12951bd66e71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/a444b6a458a2b3836ae8003f9a969b9675f593.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/a444b6a458a2b3836ae8003f9a969b9675f593.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/a444b6a458a2b3836ae8003f9a969b9675f593.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/59347f68407c5e049d92507bb1cf5aeb1e1747.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/59347f68407c5e049d92507bb1cf5aeb1e1747.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c9/a8e1143c8cea93688737144dae534a0565ece1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/59347f68407c5e049d92507bb1cf5aeb1e1747.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c9/a8e1143c8cea93688737144dae534a0565ece1.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/7006ae1e11bb48ecf475a0dbf80c5435d40be2.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/de360a7aff8a784f39767549d4131b616257d5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/7006ae1e11bb48ecf475a0dbf80c5435d40be2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/7006ae1e11bb48ecf475a0dbf80c5435d40be2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/0a1a221e070f421d063e9a4d8576145262dda2.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/de360a7aff8a784f39767549d4131b616257d5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/de360a7aff8a784f39767549d4131b616257d5.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/0a1a221e070f421d063e9a4d8576145262dda2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/0a1a221e070f421d063e9a4d8576145262dda2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/fec650008ee0c58881566589e933152f6fa53e.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/2be17591b1b165038e8f57580693c74591fb28.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/fec650008ee0c58881566589e933152f6fa53e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/fec650008ee0c58881566589e933152f6fa53e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a0ccb3b312c0e267fcac95776aed7405aef153.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a0ccb3b312c0e267fcac95776aed7405aef153.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/a0ccb3b312c0e267fcac95776aed7405aef153.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/a38a982ad91cdc94683f9ef33185dfea32747f.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/2be17591b1b165038e8f57580693c74591fb28.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/a38a982ad91cdc94683f9ef33185dfea32747f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/a38a982ad91cdc94683f9ef33185dfea32747f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/2be17591b1b165038e8f57580693c74591fb28.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bc/8cd920b40c4c2b93608a8654ad08ae33fe0843.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bc/8cd920b40c4c2b93608a8654ad08ae33fe0843.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/33f1e9b69453465c0b2920d366d1e69d53fd99.debug objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bc/8cd920b40c4c2b93608a8654ad08ae33fe0843.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dd/a935d63e9627daf22a9e392b742b563fac9d45.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dd/a935d63e9627daf22a9e392b742b563fac9d45.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dd/a935d63e9627daf22a9e392b742b563fac9d45.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e2/0ff9d769bcce45cc70bb6da98029d798b754a5.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e2/0ff9d769bcce45cc70bb6da98029d798b754a5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/e2/0ff9d769bcce45cc70bb6da98029d798b754a5.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d9 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d9/a5b4ec22605f2678e8615ec7030bdb16bf9cd5.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d9/a5b4ec22605f2678e8615ec7030bdb16bf9cd5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d9/a5b4ec22605f2678e8615ec7030bdb16bf9cd5.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/33f1e9b69453465c0b2920d366d1e69d53fd99.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/be/5cb423c71ad72bdf90ef66bb4eb3176b1f32a7.debug objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/33f1e9b69453465c0b2920d366d1e69d53fd99.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/43d140b12575cdd297472eecb02b66d4aa74a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/43d140b12575cdd297472eecb02b66d4aa74a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/be/5cb423c71ad72bdf90ef66bb4eb3176b1f32a7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/43d140b12575cdd297472eecb02b66d4aa74a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/be/5cb423c71ad72bdf90ef66bb4eb3176b1f32a7.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/81/f4878d28fc8ae68c0cb6500dc47311769b4809.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/81/f4878d28fc8ae68c0cb6500dc47311769b4809.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/6b6d3d4da1657b844765e367bc3e2e8ce56e80.debug objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/81/f4878d28fc8ae68c0cb6500dc47311769b4809.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a4/6c5e7eb0754da4d30b64de0308710108ac96f1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/6b6d3d4da1657b844765e367bc3e2e8ce56e80.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/6b6d3d4da1657b844765e367bc3e2e8ce56e80.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/d42f44bcb9658554055cb499e9ac402d1cbd29.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/d42f44bcb9658554055cb499e9ac402d1cbd29.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/d42f44bcb9658554055cb499e9ac402d1cbd29.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a4/6c5e7eb0754da4d30b64de0308710108ac96f1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/be0be4a0db217dbd35d22abffe50cf6e1d0763.debug objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a4/6c5e7eb0754da4d30b64de0308710108ac96f1.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/be0be4a0db217dbd35d22abffe50cf6e1d0763.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/42/753dd703e5fd063f77c2c50dab6a3060f95bbb.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/42/753dd703e5fd063f77c2c50dab6a3060f95bbb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/42/753dd703e5fd063f77c2c50dab6a3060f95bbb.debug debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/be0be4a0db217dbd35d22abffe50cf6e1d0763.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/riscv64-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/477c3c893a6552d8582a0577fce25e98a58221.debug rm -fr debian/libcctbx0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libcctbx0/usr/lib/debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym install -m0755 -d debian/.debhelper/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/477c3c893a6552d8582a0577fce25e98a58221.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/477c3c893a6552d8582a0577fce25e98a58221.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/a46a66361b8cfd9da918e5e0006881ab1211b0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/a46a66361b8cfd9da918e5e0006881ab1211b0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/a46a66361b8cfd9da918e5e0006881ab1211b0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/561455a82931f028d256ca3cfb6f43ef48d9b8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/561455a82931f028d256ca3cfb6f43ef48d9b8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/561455a82931f028d256ca3cfb6f43ef48d9b8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/e4bb09d7ebca28e22d9736a34b5939f89365ec.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/e4bb09d7ebca28e22d9736a34b5939f89365ec.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/e4bb09d7ebca28e22d9736a34b5939f89365ec.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/17 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/17/bde3aec533cc012d9a74cc96bc671c549925a7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/17/bde3aec533cc012d9a74cc96bc671c549925a7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/17/bde3aec533cc012d9a74cc96bc671c549925a7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/908bac83fbed34e39cb39839173020a4d48300.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/908bac83fbed34e39cb39839173020a4d48300.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/908bac83fbed34e39cb39839173020a4d48300.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/c8e2d1e17f5c17878a1ad7c8f0581f55dfbe89.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/c8e2d1e17f5c17878a1ad7c8f0581f55dfbe89.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/c8e2d1e17f5c17878a1ad7c8f0581f55dfbe89.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/81584c2808fa091e03cf1cd156994402204925.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/81584c2808fa091e03cf1cd156994402204925.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/81584c2808fa091e03cf1cd156994402204925.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/5a9f30b12b1f082c486ea10f2e6dcc1038aa42.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/5a9f30b12b1f082c486ea10f2e6dcc1038aa42.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/5a9f30b12b1f082c486ea10f2e6dcc1038aa42.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d3/17fecbbacb0b4de5961a296b79a62572688d50.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d3/17fecbbacb0b4de5961a296b79a62572688d50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d3/17fecbbacb0b4de5961a296b79a62572688d50.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/52 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/8025050fd066ecda1022021b64a24c3dbd617e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/8025050fd066ecda1022021b64a24c3dbd617e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/8025050fd066ecda1022021b64a24c3dbd617e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/5760028132c363d4d271ae5f9b69723727b4cd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/5760028132c363d4d271ae5f9b69723727b4cd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/5760028132c363d4d271ae5f9b69723727b4cd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e35bac9da53e9aaeda3e7baa82da81683a8934.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e35bac9da53e9aaeda3e7baa82da81683a8934.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e35bac9da53e9aaeda3e7baa82da81683a8934.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/486562667de92ba4d927b184326817401c27d9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/486562667de92ba4d927b184326817401c27d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/486562667de92ba4d927b184326817401c27d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/c56d8a693eddc02590cb7236a9b4f98391fdc3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/c56d8a693eddc02590cb7236a9b4f98391fdc3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e8/c56d8a693eddc02590cb7236a9b4f98391fdc3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/a3e8840b45192d64496343308645c4a85c0a12.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/a3e8840b45192d64496343308645c4a85c0a12.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/a3e8840b45192d64496343308645c4a85c0a12.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/680d09edaad7f409e9f0c49e483646990588fb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/680d09edaad7f409e9f0c49e483646990588fb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f7/680d09edaad7f409e9f0c49e483646990588fb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/39b4f082855f4167480a113a308d101e25f294.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/39b4f082855f4167480a113a308d101e25f294.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/39b4f082855f4167480a113a308d101e25f294.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/b770ab4d2755806d817a9652dcb6a718d548be.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/b770ab4d2755806d817a9652dcb6a718d548be.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/b770ab4d2755806d817a9652dcb6a718d548be.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/5c3cb570b1a891ec21b86a955d6eecb861555c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/5c3cb570b1a891ec21b86a955d6eecb861555c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/5c3cb570b1a891ec21b86a955d6eecb861555c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/8d9b7b64b84ff2f46c412bdc0cbc2b9571a3a2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/8d9b7b64b84ff2f46c412bdc0cbc2b9571a3a2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/8d9b7b64b84ff2f46c412bdc0cbc2b9571a3a2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e4a14e474039a0d17f629edb50bf44dd980853.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e4a14e474039a0d17f629edb50bf44dd980853.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/e4a14e474039a0d17f629edb50bf44dd980853.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/f09563f6658af109a611d464ee82b34ccc1e4c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/f09563f6658af109a611d464ee82b34ccc1e4c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/f09563f6658af109a611d464ee82b34ccc1e4c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/20eb30b588d936023df2cc155614c07dd8ac96.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/20eb30b588d936023df2cc155614c07dd8ac96.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/20eb30b588d936023df2cc155614c07dd8ac96.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/1f44402276fa925a435a1f7f24252250c41eaa.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/1f44402276fa925a435a1f7f24252250c41eaa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4b/1f44402276fa925a435a1f7f24252250c41eaa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/00c7952f0f37d7ee5491b5eafe61f42146ab0f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/00c7952f0f37d7ee5491b5eafe61f42146ab0f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/00c7952f0f37d7ee5491b5eafe61f42146ab0f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/5411bc107568070ce12133cdc57e8f2bb25ec8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/5411bc107568070ce12133cdc57e8f2bb25ec8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/5411bc107568070ce12133cdc57e8f2bb25ec8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/6abf4eac5b7fc75fd24d754828ed48dae136d1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/6abf4eac5b7fc75fd24d754828ed48dae136d1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/6abf4eac5b7fc75fd24d754828ed48dae136d1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/728d0eb9eeb169f52e8b907f5066443141c346.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/728d0eb9eeb169f52e8b907f5066443141c346.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3/728d0eb9eeb169f52e8b907f5066443141c346.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-riscv64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/1657dbea5f68be43a0eef6e4f0f5ab64c7ccb6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/1657dbea5f68be43a0eef6e4f0f5ab64c7ccb6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/1657dbea5f68be43a0eef6e4f0f5ab64c7ccb6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-riscv64-linux-gnu.so 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--only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/cf0da32ba18e990c13a0e631542d4ad741135c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/cf0da32ba18e990c13a0e631542d4ad741135c.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/cf0da32ba18e990c13a0e631542d4ad741135c.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/040627bc03ba4d156051d250251e41d8bf9378.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/040627bc03ba4d156051d250251e41d8bf9378.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5d/040627bc03ba4d156051d250251e41d8bf9378.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/8ac47a4bce1dd135b0541ec467ac2e07d12f1a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/8ac47a4bce1dd135b0541ec467ac2e07d12f1a.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/8ac47a4bce1dd135b0541ec467ac2e07d12f1a.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/f4c7da41b49030a80b6e3e651af667d90d69a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/f4c7da41b49030a80b6e3e651af667d90d69a9.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0c/f4c7da41b49030a80b6e3e651af667d90d69a9.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/riscv64-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-cctbx/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-cctbx/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc ln -s python3-cctbx debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc/python3-cctbx-dbgsym install -m0755 -d debian/.debhelper/python3-cctbx dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/libcctbx0/DEBIAN/shlibs install -m0755 -d debian/libcctbx0/DEBIAN echo "libann_adaptor 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libasymmetric_map 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcbf-private 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libccp4io 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx_sgtbx_asu 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libdxtbxspotfinder 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_mtz 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_pdb 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_xplor 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_masks 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_tls 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libomptbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "librstbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_boost_python 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_minpack 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_slatec 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libsmtbx_refinement_constraints 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libspotfinder 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs chmod 0644 -- debian/libcctbx0/DEBIAN/shlibs mv debian/.debhelper/generated/libcctbx0/triggers.new debian/.debhelper/generated/libcctbx0/triggers rm -f debian/libcctbx-dev/DEBIAN/shlibs rm -f debian/python3-cctbx/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged install -m0755 -d debian/python3-cctbx/DEBIAN dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-riscv64-linux-gnu.so debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_TypeError: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin dpkg-shlibdeps: warning: 51 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 136 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyList_SetItem: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Next: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyExc_RuntimeError: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_FromDoubles: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Check: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_Type: it's probably a plugin dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsTrue: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-riscv64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/postinst cat debian/python3-cctbx.postinst.debhelper >> debian/python3-cctbx/DEBIAN/postinst chmod 0755 -- debian/python3-cctbx/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/prerm cat debian/python3-cctbx.prerm.debhelper >> debian/python3-cctbx/DEBIAN/prerm chmod 0755 -- debian/python3-cctbx/DEBIAN/prerm dh_numpy3 -a -O--buildsystem=pybuild dh_numpy3: skipping binary package libcctbx0 which does not depend on the NumPy C ABI dh_numpy3: skipping binary package libcctbx-dev which does not depend on the NumPy C ABI mv debian/python3-cctbx.substvars.new debian/python3-cctbx.substvars dh_gencontrol -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx-dev/DEBIAN echo misc:Depends= >> debian/libcctbx-dev.substvars echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -cdebian/control -Pdebian/libcctbx-dev install -m0755 -d debian/libcctbx0/DEBIAN echo misc:Depends= >> debian/libcctbx0.substvars echo misc:Pre-Depends= >> debian/libcctbx0.substvars install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym -DDepends="libcctbx0 (= \${binary:Version})" -DDescription="debug symbols for libcctbx0" -DBuild-Ids="11de360a7aff8a784f39767549d4131b616257d5 142be17591b1b165038e8f57580693c74591fb28 23b54bb7d48c846e4c21168155e2a31983b8b3ec 2e85f235fd3af38d4d83c3235d63a1fa840bb0b7 37ce7005d0ed72626eead4d0cbb37214403ef61b 42753dd703e5fd063f77c2c50dab6a3060f95bbb 4fe138c5dbf615f7d6c872b6d3ccf679ad733b92 5a2fdbabf31a39dd2bc4318408eb068c56e01e6c 7a8fe8566f98880b17f753c2389020df99e68460 81f4878d28fc8ae68c0cb6500dc47311769b4809 a46c5e7eb0754da4d30b64de0308710108ac96f1 b71292dcea19b8c75bdd011d928d591cbe11e277 bc8cd920b40c4c2b93608a8654ad08ae33fe0843 be5cb423c71ad72bdf90ef66bb4eb3176b1f32a7 c9a8e1143c8cea93688737144dae534a0565ece1 d9a5b4ec22605f2678e8615ec7030bdb16bf9cd5 dda935d63e9627daf22a9e392b742b563fac9d45 e20ff9d769bcce45cc70bb6da98029d798b754a5 e9a27da85b13f39e4e0f943a4ce1ff7d3c53e1a3" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/python3-cctbx/DEBIAN echo misc:Depends= >> debian/python3-cctbx.substvars echo misc:Pre-Depends= >> debian/python3-cctbx.substvars install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym -DDepends="python3-cctbx (= \${binary:Version})" -DDescription="debug symbols for python3-cctbx" -DBuild-Ids="002089f4960ee85a3861d1a67fffdcd3df12f1d4 00970e52c567943c1b07cbbf82c1a27005dc6a20 01cb60ac98a98e92754130557761c9b48a3358a3 042cbdda70a0d6ae7a5f736268f5da07ffedccf2 06a5c7d7fd9fd63f47404f8e3882b257081b0e38 0705ace213958fd61688253bbee832442cb2e610 071864c6bb6b043955677aed4faba0297dd9f2c1 0b52d57a7c0cd0bfb9945e041646c8b9876e2986 0b6f52d0beffb3e393363adc24d78369faaae432 0cf4c7da41b49030a80b6e3e651af667d90d69a9 0f5411bc107568070ce12133cdc57e8f2bb25ec8 0f6cfb8c18b6586ed2f872644f08dfb696857cbb 115a9f30b12b1f082c486ea10f2e6dcc1038aa42 1181584c2808fa091e03cf1cd156994402204925 11e35bac9da53e9aaeda3e7baa82da81683a8934 139034210022388cea2d638aba5286a44037518f 1699115dba558c9e97c15116f34f730a1d97ff73 17bde3aec533cc012d9a74cc96bc671c549925a7 19c493ac865f3dda45e98a1264b4d55a899e1ce9 19cf0da32ba18e990c13a0e631542d4ad741135c 1ab53853302a1b60772a80005ae55c25b70d70f9 1d144cb6eecfa88b8fa44d501674d24f6c7a1f13 1e46e115404f4e946a329cc8964b18bf45d851c4 1f63c535d7c946567ca4bde1b80bc5e4bd092484 1fde4b005c95825681a7c6c9eeab3cad55e6a61a 21227e2cc34ea1bde1a945e3b17815c14c31713d 2131c8fb4d0aa000f274e09998f6bb41a051465c 22bfa1415082a8e54985b95b9423b305755a03c8 263847190d76b38adad41e1f73582e6e63b25fde 263f04ce78fcb2fa31ff54594ddfd4b16d370839 29cdd7aa70c2bb8b1e16bc2158928e6c1a66cc22 2c8f2fe69f445fba351c1dab8912e5d19ed956fe 2d0746624496f47321ef6f3db4b8abb8d61cacc4 312776a6357bae3ac05287532182379d91b05f90 334bcac34ae99b8a49c86b0a64f9cebd0d6224a3 34c07042c801119a0b5a67641b0149a0464e1624 3535c3c45db7f1e31705b952fc1fb2358b81b639 36e4a14e474039a0d17f629edb50bf44dd980853 39908bac83fbed34e39cb39839173020a4d48300 39d42f44bcb9658554055cb499e9ac402d1cbd29 41813bee6befae9b0b397ebca99fdc1f6bdd239e 4370510c334d4110d0e78556b35a11e78e91963b 44a7e76546c19df38d9de166acb2efe3b1a64d72 45fec650008ee0c58881566589e933152f6fa53e 46657502605095b48546728eab76d75b0f398ebe 4690bd93729eba65e504c5467967c61efa7bf49e 4a16ddae65f9910479e420e200adfd442d3cd3e1 4ae841063a8b6babd3767a25d0d7db3bb78c9344 4b1f44402276fa925a435a1f7f24252250c41eaa 4c20eb30b588d936023df2cc155614c07dd8ac96 4c2137b7914abf835fa0ab6e7f8587f6aedb8191 4c42deff46ec3cf2a74bab452759ec98cfdf2bf7 4d43d140b12575cdd297472eecb02b66d4aa74a9 4da8844d053db83cfc884aa4b59885768f27b34e 521cf317cf10280956dd8d36f44a13fadaa248a5 530b6e984ad812dfbd9bae98321daed90ede6871 531e83647badfb172a0e225a5e595a8f77dec988 536aaf8157e56c3370e318fc6580af7039ba5d8b 53a6f84d7d55e3ad20cbc09ffeade835f85ad8d5 5682d7f3050290ed2c7f89d48c25b31bf978e56a 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8ac28d01197992e870b802ffc577aad1e3a0b56f 8c3371d863729015a97561188049a5edb1ed82d6 8ca444b6a458a2b3836ae8003f9a969b9675f593 8d934c1259dde253f6b49da056ee27c587890580 8e2659df3468e3758a510fc6313f46558149607a 8f00f720e37242b7d66167365b48d49f21aca0ba 8fa46a66361b8cfd9da918e5e0006881ab1211b0 8fb6a3a032004d5550fc5029dff925d7607bbc0a 8fe515161f0e7925a4a03f3f1d739f470a09bc5b 90156fab5173dfd5a9188d2b25c8940697353b1a 92a442917f7b004097ebd0718b6096e028a243cd 946e4820900abab7b404f8e6b671f21191f0a506 9810047e14b438b88d54036f6744d53dbf68c904 9a475c148fece831ed24d65f5dcf12951bd66e71 9a5e18add1c892f9f29daedcfe79564a4ca53de3 9b57be10b23bdf64cc4021fd490573a20024af15 9c8b389513841739e0696dc4ef99dea38deeb4b7 9d477c3c893a6552d8582a0577fce25e98a58221 9e04ae5c841845ddfad41f1ef8f9eeb149e7ee75 9e12e83393392af399a9a1ca611dc33d114769c6 9e3c1150c2e04b9422e0f0098298defae86fcb50 9e59347f68407c5e049d92507bb1cf5aeb1e1747 9f7e656abc895b96db7bc9a0ab81456f1d2849f5 9fb98b7a78e9f53adab3847fddcdf740866df786 a16127ce82fea98d166a1e69d49c317933ca24f8 a2c3f45ee88f554d158bf132cd0de40f4e063e9b a2eb04024b1b3c0d2cc13cc5c7bf694cffc1ce9b a5a46ac49ff82a1b1f083401d7acf432f5f61605 a6fbd625c88448928e30788cc78039966cbd3ddb a98d9b7b64b84ff2f46c412bdc0cbc2b9571a3a2 a9e4bb09d7ebca28e22d9736a34b5939f89365ec aa893ec4c04cddf4786c15aa507f76a85bab4dc8 ac85be77f473dfbd5bb5f1c0e783cd8155a681b8 ad96558eac1ea071583637dda35ddc650fca9078 af1eac1cd48809e1cda02b0937cfa927689401bc b1dd25f060b080d889ff400e3693d88edeaeb502 b34fb5b188c4868977a0dab3792abd9cc493e5e0 b538a132e0fdcfaa1453dd1df8c2af541671b13d b6107a8e6eb1c6ba180a859690903e05cdb870fe b631ba7d5023e9a8413fca8a4bead77b75556e56 b6e9e2694696f9bbac224ca1313b0fad4db82377 b7561455a82931f028d256ca3cfb6f43ef48d9b8 b7d6527370aa0e93e4ae4f57480840dc4f2b1375 b93502cf6bbecc95486610f6a96364692b632603 baa6926a5cd1ea0169bfbeea65979b6cdd106852 bb1c50a8eb2372dce587e0e2d83c19f16f4f01f8 bb366b8aac30ff9fa1fdc654512be4c4f9aba3ac bda3e8840b45192d64496343308645c4a85c0a12 c05ce2e6c1ce8a4005febf8881ba57963a1c3921 c088ea3870a058b7dfbbf5152b929c0807e95b11 c0ace19c61d7eacdbacfc1c8977358ceead641b9 c292cbc18940af4e8365d756550f080f27a4cd27 c2c8e2d1e17f5c17878a1ad7c8f0581f55dfbe89 c339b4f082855f4167480a113a308d101e25f294 c3728d0eb9eeb169f52e8b907f5066443141c346 c4b770ab4d2755806d817a9652dcb6a718d548be c7ec63881bc94b7e0be03e88e29d7a3fedf6e04c cace7784681e8be9012ad1d443d7ac67edd3afb5 cf7d92221d92e394b47f53921393b3ff7866cc7c cff609088137822886ff9abba690f11f16287977 d057386e6bccfdfaa6ae4aa64257c7d365912f84 d06897f97e0437a69fbbbc2d56ec5f30c5dd3279 d26abf4eac5b7fc75fd24d754828ed48dae136d1 d317fecbbacb0b4de5961a296b79a62572688d50 d3747c73fc4b4912a79c71ce07294277b5f4732d d4dd6fc0d23018113953a134603a1a4c276a5813 d728b0591dfdcd3c7163cd986a31b6537a77f509 d93bdb472fca764b076715f4456e35a9d1aafa93 db76b5cbb0b5630be6485c6942f37b54b3ca1479 db9b8dc84c398210e240f475bd0f1cd3b467c048 dcbf7e1e2070390b99d0afdf2fa2d91ad92dd5f2 de1043fd5365e06e87742180f92648a8c840673b debe0be4a0db217dbd35d22abffe50cf6e1d0763 e16a01f9468a9447ccfce2198b16ca23b13ffd2f e3e1c05ee764ac61dd838cf894a42c0b6aa9e87f e4a7fce17a10c276f4a69388889dc16ed9bd5d5f e86f9f51cc47515e3fafcfb5d5fe6b2eb2b43443 e8c56d8a693eddc02590cb7236a9b4f98391fdc3 ea51b645d6b1d0a6897be11758a2b72ece2d89f8 ec1feae47b41b0c64f267e4ca96a66e8f820a384 ec5760028132c363d4d271ae5f9b69723727b4cd ec7ec9ee480de5359d27204f97a8ddf8172c31a0 ee8f06ef374b490d55f3d4d0fcfd696e13c248f1 ef8ac47a4bce1dd135b0541ec467ac2e07d12f1a f0d1128387806f2f7e6b34358fc3d62e55da13c2 f16e87c800f1808158ea89cdeacf4f6a7f8bc569 f352d7332e9c1870e256ff9eb4dfe538bfd1cc8d f45c3cb570b1a891ec21b86a955d6eecb861555c f68025050fd066ecda1022021b64a24c3dbd617e f7680d09edaad7f409e9f0c49e483646990588fb fbf09563f6658af109a611d464ee82b34ccc1e4c fc3fccde7442ef8309ecf3a2d2263e1c0ae420fa fcc48152f2c1643c051d747a7f8bc467b1b5320e fdc014619947192312d3a98c241c9106eb0c75b3" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/python3-cctbx chmod 0644 -- debian/libcctbx-dev/DEBIAN/control chmod 0644 -- debian/libcctbx0/DEBIAN/control chmod 0644 -- debian/python3-cctbx/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/DEBIAN install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/libcctbx0/DEBIAN cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN cd debian/.debhelper/python3-cctbx/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/libcctbx0 .. dpkg-deb --root-owner-group --build debian/libcctbx-dev .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-cctbx/dbgsym-root .. dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb'. dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb'. dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/libcctbx0/dbgsym-root .. dpkg-deb: building package 'libcctbx0-dbgsym' in '../libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/python3-cctbx .. dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb'. dpkg-genbuildinfo --build=any -O../cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.buildinfo dpkg-genchanges --build=any -O../cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-11-24T12:13:50Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 24 Nov 2025 12:13:53 +0000 | +------------------------------------------------------------------------------+ cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.changes: ----------------------------------------------- Format: 1.8 Date: Fri, 24 Oct 2025 19:38:49 +0200 Source: cctbx Binary: libcctbx-dev libcctbx0 libcctbx0-dbgsym python3-cctbx python3-cctbx-dbgsym Architecture: riscv64 Version: 2025.2+ds2+~3.23.0+ds1-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Roland Mas Description: libcctbx-dev - Computational Crystallography Toolbox - headers libcctbx0 - Computational Crystallography Toolbox - runtime libraries python3-cctbx - Python Toolbox for crystallography Closes: 1085414 1116719 Changes: cctbx (2025.2+ds2+~3.23.0+ds1-1) unstable; urgency=medium . [ Picca Frédéric-Emmanuel ] * New upstream version 2025.2+ds2+~3.23.0+ds1 . [ Roland Mas ] * Bug fix: "FTBFS with the nocheck build profile", thanks to Santiago Vila (Closes: #1116719). * Bug fix: "Python SyntaxWarning", thanks to Graham Inggs (Closes: #1085414). 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python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb 93aa79221b231bb629c06260112899214e772477d6118b79ef7217d45e52d02e 37986752 python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb Build-Origin: Debian Build-Architecture: riscv64 Build-Date: Mon, 24 Nov 2025 12:13:43 +0000 Build-Path: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 Installed-Build-Depends: adduser (= 3.153), adwaita-icon-theme (= 49.0-1), architecture-properties (= 0.2.6), at-spi2-common (= 2.58.1-1), autoconf (= 2.72-3.1), automake (= 1:1.18.1-2), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.3-1), binutils (= 2.45-7), binutils-common (= 2.45-7), binutils-riscv64-linux-gnu (= 2.45-7), blt (= 2.5.3+dfsg-8), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), comerr-dev (= 2.1-1.47.2-3+b3), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-4), cpp-15-riscv64-linux-gnu (= 15.2.0-4), cpp-riscv64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), dbus (= 1.16.2-2), dbus-bin (= 1.16.2-2), dbus-daemon (= 1.16.2-2), dbus-session-bus-common (= 1.16.2-2), dbus-system-bus-common (= 1.16.2-2), dbus-user-session (= 1.16.2-2), dconf-gsettings-backend (= 0.49.0-1), dconf-service (= 0.49.0-1), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-exec (= 0.30), dh-python (= 6.20250414), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), fftw-dev (= 2.1.5-7+b1), fftw2 (= 2.1.5-7+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.4), fontconfig-config (= 2.15.0-2.4), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-lato (= 2.015-1), fonts-lyx (= 2.4.4-2), fonts-urw-base35 (= 20200910-8), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-4), g++-15-riscv64-linux-gnu (= 15.2.0-4), g++-riscv64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-4), gcc-15-base (= 15.2.0-4), gcc-15-riscv64-linux-gnu (= 15.2.0-4), gcc-riscv64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.12-1), groff-base (= 1.23.0-9), gtk-update-icon-cache (= 4.20.2+ds-1), gzip (= 1.13-1), hdf5-helpers (= 1.14.5+repack-4), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), ibverbs-providers (= 56.1-1+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), jq (= 1.8.1-4), krb5-multidev (= 1.21.3-5), libabsl20240722 (= 20240722.0-4), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.4-2), libaec0 (= 1.1.4-2), libann-cctbx-dev (= 1.1.2+doc-9+b1), libann-cctbx0 (= 1.1.2+doc-9+b1), libantlr3c-3.4-0 (= 3.4+dfsg-4+b2), libantlr3c-dev (= 3.4+dfsg-4+b2), libaom3 (= 3.13.1-1), libapparmor1 (= 4.1.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-4), libatk-bridge2.0-0t64 (= 2.58.1-1), libatk1.0-0t64 (= 2.58.1-1), libatomic1 (= 15.2.0-4), libatspi2.0-0t64 (= 2.58.1-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1), libavahi-client3 (= 0.8-17), libavahi-common-data (= 0.8-17), libavahi-common3 (= 0.8-17), libavif16 (= 1.3.0-1+b1), libbinutils (= 2.45-7), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libboost-atomic1.83-dev (= 1.83.0-5), libboost-atomic1.83.0 (= 1.83.0-5), libboost-chrono1.83-dev (= 1.83.0-5), libboost-chrono1.83.0t64 (= 1.83.0-5), libboost-date-time1.83-dev (= 1.83.0-5), libboost-date-time1.83.0 (= 1.83.0-5), libboost-dev (= 1.83.0.2+b2), libboost-numpy-dev (= 1.83.0.2+b2), libboost-numpy1.83-dev (= 1.83.0-5), libboost-numpy1.83.0 (= 1.83.0-5), libboost-python-dev (= 1.83.0.2+b2), libboost-python1.83-dev (= 1.83.0-5), libboost-python1.83.0 (= 1.83.0-5), libboost-serialization1.83-dev (= 1.83.0-5), libboost-serialization1.83.0 (= 1.83.0-5), libboost-system1.83-dev (= 1.83.0-5), libboost-system1.83.0 (= 1.83.0-5), libboost-thread-dev (= 1.83.0.2+b2), libboost-thread1.83-dev (= 1.83.0-5), libboost-thread1.83.0 (= 1.83.0-5), libboost-timer-dev (= 1.83.0.2+b2), libboost-timer1.83-dev (= 1.83.0-5), libboost-timer1.83.0 (= 1.83.0-5), libboost1.83-dev (= 1.83.0-5), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcairo-gobject2 (= 1.18.4-1+b1), libcairo2 (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcbf-dev (= 0.9.7+dfsg1-5.1), libcbf1t64 (= 0.9.7+dfsg1-5.1), libcc1-0 (= 15.2.0-4), libccp4-data (= 8.0.0-5), libccp4-dev (= 8.0.0-5), libccp4c0t64 (= 8.0.0-5), libccp4f0t64 (= 8.0.0-5), libclipper-dev (= 2.1.20201109-2+b3), libclipper2 (= 2.1.20201109-2+b3), libcloudproviders0 (= 0.3.6-3), libcolord2 (= 1.4.8-1), libcom-err2 (= 1.47.2-3+b3), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-7), libctf0 (= 2.45-7), libcups2t64 (= 2.4.14-1), libcurl3t64-gnutls (= 8.17.0~rc2-1), libcurl4-openssl-dev (= 8.17.0~rc2-1), libcurl4t64 (= 8.17.0~rc2-1), libdatrie1 (= 0.2.13-4), libdav1d7 (= 1.5.1-1), libdb5.3t64 (= 5.3.28+dfsg2-10), libdbus-1-3 (= 1.16.2-2), libdconf1 (= 0.49.0-1), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.28), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdouble-conversion3 (= 3.3.1-2), libdpkg-perl (= 1.22.21), libdrm-amdgpu1 (= 2.4.127-1), libdrm-common (= 2.4.127-1), libdrm2 (= 2.4.127-1), libedit2 (= 3.1-20250104-1), libegl-mesa0 (= 25.2.5-1), libegl1 (= 1.7.0-1+b2), libeigen3-dev (= 3.4.0-5), libelf1t64 (= 0.193-3), libepoxy0 (= 1.5.10-2), libevdev2 (= 1.13.4+dfsg-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libevent-core-2.1-7t64 (= 2.1.12-stable-10+b1), libevent-pthreads-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.3-1), libexpat1-dev (= 2.7.3-1), libfabric1 (= 2.1.0-1.1), libffi8 (= 3.5.2-2), libfftw3-bin (= 3.3.10-2+b1), libfftw3-dev (= 3.3.10-2+b1), libfftw3-double3 (= 3.3.10-2+b1), libfftw3-long3 (= 3.3.10-2+b1), libfftw3-single3 (= 3.3.10-2+b1), libfile-stripnondeterminism-perl (= 1.15.0-1), libfontconfig1 (= 2.15.0-2.4), libfontenc1 (= 1:1.1.8-1+b2), libfreetype6 (= 2.13.3+dfsg-1), libfribidi0 (= 1.0.16-3), libfuse3-4 (= 3.17.4-1), libgav1-1 (= 0.19.0-3+b1), libgbm1 (= 25.2.5-1), libgcc-15-dev (= 15.2.0-4), libgcc-s1 (= 15.2.0-4), libgcrypt20 (= 1.11.2-2), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgdk-pixbuf-2.0-0 (= 2.44.4+dfsg-1), libgdk-pixbuf2.0-common (= 2.44.4+dfsg-1), libgfortran5 (= 15.2.0-4), libgl-dev (= 1.7.0-1+b2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.2.5-1), libgles2 (= 1.7.0-1+b2), libglew2.2 (= 2.2.0-4+b2), libglib2.0-0t64 (= 2.86.1-1), libglu1-mesa (= 9.0.2-1.1+b3), libglu1-mesa-dev (= 9.0.2-1.1+b3), libglut3.12 (= 3.4.0-6), libglvnd0 (= 1.7.0-1+b2), libglx-dev (= 1.7.0-1+b2), libglx-mesa0 (= 25.2.5-1), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-5), libgmp10 (= 2:6.3.0+dfsg-5), libgmpxx4ldbl (= 2:6.3.0+dfsg-5), libgnutls-dane0t64 (= 3.8.10-2), libgnutls-openssl27t64 (= 3.8.10-2), libgnutls28-dev (= 3.8.10-2), libgnutls30t64 (= 3.8.10-2), libgomp1 (= 15.2.0-4), libgpg-error0 (= 1.56-2), libgprofng0 (= 2.45-7), libgraphite2-3 (= 1.3.14-11), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libgtk-3-0t64 (= 3.24.51-1), libgtk-3-common (= 3.24.51-1), libgudev-1.0-0 (= 238-7), libharfbuzz0b (= 12.1.0-1), libhdf5-310 (= 1.14.5+repack-4), libhdf5-cpp-310 (= 1.14.5+repack-4), libhdf5-dev (= 1.14.5+repack-4), libhdf5-fortran-310 (= 1.14.5+repack-4), libhdf5-hl-310 (= 1.14.5+repack-4), libhdf5-hl-cpp-310 (= 1.14.5+repack-4), libhdf5-hl-fortran-310 (= 1.14.5+repack-4), libhogweed6t64 (= 3.10.2-1), libhwloc-plugins (= 2.12.2-1), libhwloc15 (= 2.12.2-1), libibmad5 (= 56.1-1+b1), libibumad3 (= 56.1-1+b1), libibverbs1 (= 56.1-1+b1), libice6 (= 2:1.1.1-1), libicu76 (= 76.1-4), libidn2-0 (= 2.3.8-4), libidn2-dev (= 2.3.8-4), libimagequant0 (= 4.4.0-3), libinput-bin (= 1.28.1-1), libinput10 (= 1.28.1-1), libisl23 (= 0.27-1), libitm1 (= 15.2.0-4), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjq1 (= 1.8.1-4), libjs-jquery (= 3.7.1+dfsg+~3.5.33-1), libjs-sphinxdoc (= 8.2.3-8), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack3 (= 3.12.1-7), liblcms2-2 (= 2.16-2), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-7), liblsan0 (= 15.2.0-4), liblz4-1 (= 1.10.0-4), liblz4-dev (= 1.10.0-4), liblzf1 (= 3.6-4+b3), liblzma-dev (= 5.8.1-2), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmd4c0 (= 0.5.2-2+b1), libmmdb2-0 (= 2.0.22-1+b2), libmmdb2-dev (= 2.0.22-1+b2), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libmtdev1t64 (= 1.1.7-1), libmunge2 (= 0.5.16-1), libncursesw6 (= 6.5+20250216-2), libnetcdf22 (= 1:4.9.3-1+b1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp2-dev (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libnghttp3-dev (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-gnutls8 (= 1.16.0-1), libngtcp2-crypto-ossl-dev (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libngtcp2-dev (= 1.16.0-1), libnl-3-200 (= 3.11.0-2), libnl-route-3-200 (= 3.11.0-2), libnotify4 (= 0.8.6-2), libonig5 (= 6.9.10-1), libopengl-dev (= 1.7.0-1+b2), libopengl0 (= 1.7.0-1+b2), libopenjp2-7 (= 2.5.3-2.1), libopenmpi40 (= 5.0.8-10+b1), libp11-kit-dev (= 0.25.9-2), libp11-kit0 (= 0.25.9-2), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam-systemd (= 258.1-1), libpam0g (= 1.7.0-5), libpango-1.0-0 (= 1.56.3-2), libpangocairo-1.0-0 (= 1.56.3-2), libpangoft2-1.0-0 (= 1.56.3-2), libpciaccess0 (= 0.17-3+b3), libpcre2-16-0 (= 10.46-1), libpcre2-32-0 (= 10.46-1), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.46.4-1), libpkgconf3 (= 1.8.1-4), libpmix2t64 (= 6.0.0+really5.0.8-1), libpng16-16t64 (= 1.6.50-1), libpopt0 (= 1.19+dfsg-2), libproc2-0 (= 2:4.0.4-9), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-all-dev (= 3.13.7-1), libpython3-dev (= 3.13.7-1), libpython3-stdlib (= 3.13.7-1), libpython3.13 (= 3.13.9-1), libpython3.13-dev (= 3.13.9-1), libpython3.13-minimal (= 3.13.9-1), libpython3.13-stdlib (= 3.13.9-1), libqhull-r8.0 (= 2020.2-7), libqt5core5t64 (= 5.15.17+dfsg-4), libqt5dbus5t64 (= 5.15.17+dfsg-4), libqt5designer5 (= 5.15.17-3), libqt5gui5t64 (= 5.15.17+dfsg-4), libqt5help5 (= 5.15.17-3), libqt5network5t64 (= 5.15.17+dfsg-4), libqt5opengl5t64 (= 5.15.17+dfsg-4), libqt5printsupport5t64 (= 5.15.17+dfsg-4), libqt5sql5t64 (= 5.15.17+dfsg-4), libqt5test5t64 (= 5.15.17+dfsg-4), libqt5widgets5t64 (= 5.15.17+dfsg-4), libqt5xml5t64 (= 5.15.17+dfsg-4), libraqm0 (= 0.10.3-1), librav1e0.8 (= 0.8.1-5), librdmacm1t64 (= 56.1-1+b1), libreadline8t64 (= 8.3-3), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.9-2), libsemanage-common (= 3.9-1), libsemanage2 (= 3.9-1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsepol2 (= 3.9-2), libsframe2 (= 2.45-7), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.4-1), libssl3t64 (= 3.5.4-1), libssm-dev (= 1.4.0-2+b3), libssm2 (= 1.4.0-2+b3), libstdc++-15-dev (= 15.2.0-4), libstdc++6 (= 15.2.0-4), libsvtav1enc2 (= 2.3.0+dfsg-1), libsystemd-shared (= 258.1-1), libsystemd0 (= 258.1-1), libsz2 (= 1.1.4-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtcl8.6 (= 8.6.17+dfsg-1), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2+b1), libtiff-dev (= 4.7.1-1), libtiff6 (= 4.7.1-1), libtiffxx6 (= 4.7.1-1), libtinfo6 (= 6.5+20250216-2), libtk8.6 (= 8.6.17-1), libtool (= 2.5.4-7), libtsan2 (= 15.2.0-4), libubsan1 (= 15.2.0-4), libuchardet0 (= 0.0.8-2), libucx0 (= 1.19.0+ds-1), libudev1 (= 258.1-1), libunbound8 (= 1.24.1-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libvulkan1 (= 1.4.321.0-1), libwacom-common (= 2.16.1-1), libwacom9 (= 2.16.1-1), libwayland-client0 (= 1.24.0-2+b1), libwayland-cursor0 (= 1.24.0-2+b1), libwayland-egl1 (= 1.24.0-2+b1), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libwxbase3.2-1t64 (= 3.2.8+dfsg-2), libwxgtk-gl3.2-1t64 (= 3.2.8+dfsg-2), libwxgtk3.2-1t64 (= 3.2.8+dfsg-2), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-icccm4 (= 0.4.2-1), libxcb-image0 (= 0.4.0-2+b2), libxcb-keysyms1 (= 0.4.1-1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render-util0 (= 0.3.10-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shape0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-util1 (= 0.4.1-1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb-xinerama0 (= 1.17.0-2+b1), libxcb-xinput0 (= 1.17.0-2+b1), libxcb-xkb1 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxft2 (= 2.3.6-1+b4), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon-x11-0 (= 1.7.0-2.1), libxkbcommon0 (= 1.7.0-2.1), libxml2-16 (= 2.14.6+dfsg-0.1), libxnvctrl0 (= 535.171.04-1+b2), libxrandr2 (= 2:1.5.4-1+b3), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxslt1.1 (= 1.1.43-0.2), libxss1 (= 1:1.2.3-1+b3), libxtst6 (= 2:1.2.5-1), libxxf86vm1 (= 1:1.1.4-1+b4), libxxhash-dev (= 0.8.3-2), libxxhash0 (= 0.8.3-2), libyuv0 (= 0.0.1919.20250919-1), libz3-4 (= 4.13.3-1), libzopfli1 (= 1.0.3-3), libzstd-dev (= 1.5.7+dfsg-2), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.16.12-2), login.defs (= 1:4.18.0-2), m4 (= 1.4.20-2), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), mesa-libgallium (= 25.2.5-1), mount (= 2.41.2-4), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.2-1), ocl-icd-libopencl1 (= 2.3.4-1), openssl (= 3.5.4-1), openssl-provider-legacy (= 3.5.4-1), passwd (= 1:4.18.0-2), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-9), pybind11-dev (= 3.0.1-2), pymol-data (= 3.1.0+dfsg-1), python-matplotlib-data (= 3.10.7+dfsg1-1), python3 (= 3.13.7-1), python3-all (= 3.13.7-1), python3-all-dev (= 3.13.7-1), python3-attr (= 25.4.0-1), python3-autocommand (= 2.2.2-3), python3-biopython (= 1.85+dfsg-5), python3-brotli (= 1.1.0-2+b7), python3-cairo (= 1.27.0-2), python3-certifi (= 2025.1.31+ds-1), python3-chardet (= 5.2.0+dfsg-2), python3-charset-normalizer (= 3.4.3-1), python3-contourpy (= 1.3.1-2), python3-cycler (= 0.12.1-2), python3-dateutil (= 2.9.0-4), python3-decorator (= 5.2.1-2), python3-dev (= 3.13.7-1), python3-flexcache (= 0.3-2), python3-flexparser (= 0.4-1), python3-fonttools (= 4.57.0-2), python3-freetype (= 2.5.1-2), python3-fs (= 2.4.16-8), python3-h5py (= 3.14.0-3), python3-h5py-serial (= 3.14.0-3), python3-hdf5plugin (= 5.1.0-1), python3-idna (= 3.10-1), python3-inflect (= 7.5.0-1), python3-iniconfig (= 2.1.0-1), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-kiwisolver (= 1.4.10~rc0-1), python3-legacy-cgi (= 2.6.3-1), python3-lxml (= 6.0.2-1), python3-lz4 (= 4.4.4+dfsg-3), python3-matplotlib (= 3.10.7+dfsg1-1), python3-minimal (= 3.13.7-1), python3-more-itertools (= 10.8.0-1), python3-mpmath (= 1.3.0-2), python3-mrcfile (= 1.5.4-2), python3-msgpack (= 1.0.3-3+b5), python3-natsort (= 8.4.0-1), python3-numpy (= 1:2.3.3+ds-3), python3-numpy-dev (= 1:2.3.3+ds-3), python3-nxmx (= 0.0.4-1), python3-opengl (= 3.1.10+dfsg-1), python3-ordered-set (= 4.1.0-1), python3-packaging (= 25.0-1), python3-pil (= 12.0.0-1), python3-pil.imagetk (= 12.0.0-1), python3-pint (= 0.25-1), python3-pip (= 25.2+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-platformdirs (= 4.4.0-1), python3-pluggy (= 1.6.0-1), python3-procrunner (= 2.3.3-2), python3-psutil (= 7.1.0-1), python3-pycbf (= 0.9.7+dfsg1-5.1), python3-pygments (= 2.18.0+dfsg-2), python3-pymol (= 3.1.0+dfsg-1+b1), python3-pyparsing (= 3.1.3-1), python3-pyqt5 (= 5.15.11+dfsg-3), python3-pyqt5.qtopengl (= 5.15.11+dfsg-3), python3-pyqt5.sip (= 12.17.1-1), python3-pytest (= 8.4.2-1), python3-reportlab (= 4.4.4-2), python3-requests (= 2.32.5+dfsg-1), python3-rlpycairo (= 0.3.0-4), python3-scipy (= 1.16.2-3), python3-setuptools (= 78.1.1-0.1), python3-six (= 1.17.0-1), python3-sympy (= 1.14.0-2), python3-tk (= 3.13.9-1), python3-tqdm (= 4.67.1-6), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-ufolib2 (= 0.17.1+dfsg1-1), python3-urllib3 (= 2.5.0-1), python3-wheel (= 0.46.1-2), python3-wxgtk4.0 (= 4.2.3+dfsg-2), python3-zipp (= 3.23.0-1), python3-zopfli (= 0.2.3.post1-1), python3.13 (= 3.13.9-1), python3.13-dev (= 3.13.9-1), python3.13-minimal (= 3.13.9-1), python3.13-tk (= 3.13.9-1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b2), rsync (= 3.4.1+ds1-6), scons (= 4.8.1+dfsg-1), sed (= 4.9-2), sensible-utils (= 0.0.26), sfftw-dev (= 2.1.5-7+b1), sfftw2 (= 2.1.5-7+b1), sgml-base (= 1.31+nmu1), shared-mime-info (= 2.4-5+b3), sphinx-rtd-theme-common (= 3.0.2+dfsg-3), systemd (= 258.1-1), systemd-sysv (= 258.1-1), sysvinit-utils (= 3.15-5), tar (= 1.35+dfsg-3.1), tk8.6-blt2.5 (= 2.5.3+dfsg-8), tzdata (= 2025b-5), unicode-data (= 16.0.0-1), util-linux (= 2.41.2-4), w3c-sgml-lib (= 1.3-3), x11-common (= 1:7.7+26), x11proto-dev (= 2024.1-1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.42-1), xml-core (= 0.19), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1761327529" +------------------------------------------------------------------------------+ | Package contents Mon, 24 Nov 2025 12:13:55 +0000 | +------------------------------------------------------------------------------+ libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb ------------------------------------------------- new Debian package, version 2.0. size 1161820 bytes: control archive=23348 bytes. 2957 bytes, 55 lines control 63779 bytes, 827 lines md5sums Package: libcctbx-dev Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Architecture: riscv64 Maintainer: Debian Science Maintainers Installed-Size: 8607 Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2025.2+ds2+~3.23.0+ds1-1) Section: devel Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - headers Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide everythings needed to link against the cctbx libraries. drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/annlib_adaptbx/ -rw-r--r-- root/root 2068 2025-10-24 17:38 ./usr/include/annlib_adaptbx/ann_adaptor.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/boost_adaptbx/ -rw-r--r-- root/root 933 2025-03-01 14:39 ./usr/include/boost_adaptbx/boost_range_python.hpp -rw-r--r-- root/root 930 2025-03-01 14:39 ./usr/include/boost_adaptbx/convertible.h -rw-r--r-- root/root 3412 2025-03-01 14:39 ./usr/include/boost_adaptbx/exporting.hpp -rw-r--r-- root/root 3770 2025-03-01 14:39 ./usr/include/boost_adaptbx/floating_point_exceptions.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/ -rw-r--r-- root/root 1588 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/graph_export_adaptor.hpp -rw-r--r-- root/root 2301 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/graph_type.hpp -rw-r--r-- root/root 9259 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/maximum_clique_greedy.hpp -rw-r--r-- root/root 13452 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/maximum_clique_rascal.hpp -rw-r--r-- root/root 7254 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/vertex_map.hpp -rw-r--r-- root/root 2046 2025-03-01 14:39 ./usr/include/boost_adaptbx/hash.h -rw-r--r-- root/root 1442 2025-03-01 14:39 ./usr/include/boost_adaptbx/iterator_range.h -rw-r--r-- root/root 2380 2025-03-01 14:39 ./usr/include/boost_adaptbx/optional_conversions.h -rw-r--r-- root/root 160 2025-03-01 14:39 ./usr/include/boost_adaptbx/precompiled.h -rw-r--r-- root/root 15836 2025-03-01 14:39 ./usr/include/boost_adaptbx/python_streambuf.h -rw-r--r-- root/root 2273 2025-03-01 14:39 ./usr/include/boost_adaptbx/std_pair_conversion.h -rw-r--r-- root/root 742 2025-03-01 14:39 ./usr/include/boost_adaptbx/std_pair_fwd.h -rw-r--r-- root/root 1177 2025-03-01 14:39 ./usr/include/boost_adaptbx/swig_arg.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/boost_adaptbx/tests/ -rw-r--r-- root/root 1847 2025-03-01 14:39 ./usr/include/boost_adaptbx/tests/tst_optional_copy.h -rw-r--r-- root/root 1499 2025-03-01 14:39 ./usr/include/boost_adaptbx/tuple_conversion.h -rw-r--r-- root/root 380 2025-10-24 17:38 ./usr/include/boost_adaptbx/type_id_eq.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/ -rw-r--r-- root/root 858 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/basic.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/boost_python/ -rw-r--r-- root/root 8255 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h -rw-r--r-- root/root 1764 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/boost_python/general_cbf_write.h -rw-r--r-- root/root 305 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/buffer_based_service.h -rw-r--r-- root/root 6894 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/cbf_adaptor.h -rw-r--r-- root/root 850 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h -rw-r--r-- root/root 2701 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/mar_adaptor.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ -rw-r--r-- root/root 2043 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_ccplib_fem.hpp -rw-r--r-- root/root 3515 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_diskio_fem.hpp -rw-r--r-- root/root 2389 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_fftlib_fem.hpp -rw-r--r-- root/root 535 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_library_fem.hpp -rw-r--r-- root/root 1896 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_maplib_fem.hpp -rw-r--r-- root/root 8765 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_mtzlib_fem.hpp -rw-r--r-- root/root 892 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_other_fem.hpp -rw-r--r-- root/root 1656 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_parser_f.h -rw-r--r-- root/root 1398 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_parser_fem.hpp -rw-r--r-- root/root 4502 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_symlib_fem.hpp -rw-r--r-- root/root 17883 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/cmaplib_f.h -rw-r--r-- root/root 23922 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/cmtzlib_f.h -rw-r--r-- root/root 15628 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/csymlib_f.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/dev/ -rw-r--r-- root/root 703 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/dev/fftlib.hpp -rw-r--r-- root/root 611 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/library_f.h -rw-r--r-- root/root 345 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/printf_wrappers.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cctbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/ -rw-r--r-- root/root 16795 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/adp_restraints.h -rw-r--r-- root/root 12123 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/adp_similarity.h -rw-r--r-- root/root 5376 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/aniso_restraints.h -rw-r--r-- root/root 2381 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/fixed_u_eq_adp.h -rw-r--r-- root/root 2117 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/isotropic_adp.h -rw-r--r-- root/root 6375 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/rigid_bond.h -rw-r--r-- root/root 8016 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/rigu.h -rw-r--r-- root/root 28407 2025-03-01 14:39 ./usr/include/cctbx/adptbx.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/adptbx/ -rw-r--r-- root/root 9714 2025-03-01 14:39 ./usr/include/cctbx/adptbx/hirshfeld.h -rw-r--r-- root/root 1779 2025-03-01 14:39 ./usr/include/cctbx/anharmonic.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cctbx/boost_python/ -rw-r--r-- root/root 660 2025-10-24 17:38 ./usr/include/cctbx/boost_python/flex_fwd.h -rw-r--r-- root/root 5808 2025-03-01 14:39 ./usr/include/cctbx/coordinates.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/covariance/ -rw-r--r-- root/root 4603 2025-03-01 14:39 ./usr/include/cctbx/covariance/covariance.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/crystal/ -rw-r--r-- root/root 5512 2025-03-01 14:39 ./usr/include/cctbx/crystal/asu_clusters.h -rw-r--r-- root/root 12174 2025-03-01 14:39 ./usr/include/cctbx/crystal/close_packing.h -rw-r--r-- root/root 16580 2025-03-01 14:39 ./usr/include/cctbx/crystal/coordination_sequences.h -rw-r--r-- root/root 35515 2025-03-01 14:39 ./usr/include/cctbx/crystal/direct_space_asu.h -rw-r--r-- root/root 9145 2025-03-01 14:39 ./usr/include/cctbx/crystal/incremental_pairs.h -rw-r--r-- root/root 148 2025-03-01 14:39 ./usr/include/cctbx/crystal/namespace.h -rw-r--r-- root/root 11257 2025-03-01 14:39 ./usr/include/cctbx/crystal/neighbors_fast.h -rw-r--r-- root/root 6859 2025-03-01 14:39 ./usr/include/cctbx/crystal/neighbors_simple.h -rw-r--r-- root/root 30130 2025-03-01 14:39 ./usr/include/cctbx/crystal/pair_tables.h -rw-r--r-- root/root 12717 2025-03-01 14:39 ./usr/include/cctbx/crystal/site_cluster_analysis.h -rw-r--r-- root/root 1385 2025-03-01 14:39 ./usr/include/cctbx/crystal/symmetry.h -rw-r--r-- root/root 736 2025-03-01 14:39 ./usr/include/cctbx/crystal/workarounds_bpl.h -rw-r--r-- root/root 6031 2025-03-01 14:39 ./usr/include/cctbx/crystal_orientation.h -rw-r--r-- root/root 2857 2025-03-01 14:39 ./usr/include/cctbx/cumulative_intensity_distribution.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/dmtbx/ -rw-r--r-- root/root 15584 2025-03-01 14:39 ./usr/include/cctbx/dmtbx/triplet_generator.h -rw-r--r-- root/root 4272 2025-03-01 14:39 ./usr/include/cctbx/dmtbx/triplet_phase_relation.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cctbx/eltbx/ -rw-r--r-- root/root 6018 2025-03-01 14:39 ./usr/include/cctbx/eltbx/attenuation_coefficient.h -rw-r--r-- root/root 1863 2025-03-01 14:39 ./usr/include/cctbx/eltbx/basic.h -rw-r--r-- root/root 2606 2025-03-01 14:39 ./usr/include/cctbx/eltbx/chemical_elements.h -rw-r--r-- root/root 2122 2025-10-24 17:38 ./usr/include/cctbx/eltbx/covalent_radii.h -rw-r--r-- root/root 2870 2025-03-01 14:39 ./usr/include/cctbx/eltbx/electron_scattering.h -rw-r--r-- root/root 2828 2025-03-01 14:39 ./usr/include/cctbx/eltbx/fp_fdp.h -rw-r--r-- root/root 3979 2025-03-01 14:39 ./usr/include/cctbx/eltbx/henke.h -rw-r--r-- root/root 3107 2025-03-01 14:39 ./usr/include/cctbx/eltbx/icsd_radii.h -rw-r--r-- root/root 3514 2025-03-01 14:39 ./usr/include/cctbx/eltbx/neutron.h -rw-r--r-- root/root 4155 2025-03-01 14:39 ./usr/include/cctbx/eltbx/sasaki.h -rw-r--r-- root/root 2165 2025-03-01 14:39 ./usr/include/cctbx/eltbx/tiny_pse.h -rw-r--r-- root/root 2151 2025-03-01 14:39 ./usr/include/cctbx/eltbx/wavelengths.h -rw-r--r-- root/root 11495 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering/ -rw-r--r-- root/root 2284 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering/form_factor.h -rw-r--r-- root/root 1664 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering/gaussian.h -rw-r--r-- root/root 1724 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering/n_gaussian.h -rw-r--r-- root/root 579 2025-03-01 14:39 ./usr/include/cctbx/eltbx/xray_scattering/n_gaussian_raw.h -rw-r--r-- root/root 2301 2025-03-01 14:39 ./usr/include/cctbx/error.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/examples/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/examples/merging/ -rw-r--r-- 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./usr/include/cctbx/geometry_restraints/shared_wrapper_pickle.hpp -rw-r--r-- root/root 4309 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/sorted_asu_proxies.h -rw-r--r-- root/root 7895 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/utils.h -rw-r--r-- root/root 6351 2025-03-01 14:39 ./usr/include/cctbx/hendrickson_lattman.h -rw-r--r-- root/root 190 2025-03-01 14:39 ./usr/include/cctbx/import_scitbx_af.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/maptbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/maptbx/accessors/ -rw-r--r-- root/root 2403 2025-03-01 14:39 ./usr/include/cctbx/maptbx/accessors/c_grid_p1.h -rw-r--r-- root/root 2485 2025-03-01 14:39 ./usr/include/cctbx/maptbx/accessors/c_grid_padded_p1.h -rw-r--r-- root/root 9822 2025-03-01 14:39 ./usr/include/cctbx/maptbx/asymmetric_map.h -rw-r--r-- root/root 34050 2025-03-01 14:39 ./usr/include/cctbx/maptbx/average_densities.h drwxr-xr-x root/root 0 2025-03-01 14:39 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./usr/include/cctbx/maptbx/standard_deviations_around_sites.hpp -rw-r--r-- root/root 7885 2025-03-01 14:39 ./usr/include/cctbx/maptbx/statistics.h -rw-r--r-- root/root 15138 2025-03-01 14:39 ./usr/include/cctbx/maptbx/structure_factors.h -rw-r--r-- root/root 21027 2025-03-01 14:39 ./usr/include/cctbx/maptbx/target_and_gradients.h -rw-r--r-- root/root 46144 2025-03-01 14:39 ./usr/include/cctbx/maptbx/utils.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/masks/ -rw-r--r-- root/root 14960 2025-03-01 14:39 ./usr/include/cctbx/masks/around_atoms.h -rw-r--r-- root/root 6868 2025-03-01 14:39 ./usr/include/cctbx/masks/flood_fill.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/math/ -rw-r--r-- root/root 1087 2025-03-01 14:39 ./usr/include/cctbx/math/array_utils.h -rw-r--r-- root/root 4510 2025-03-01 14:39 ./usr/include/cctbx/math/cos_sin_table.h -rw-r--r-- root/root 1439 2025-03-01 14:39 ./usr/include/cctbx/math/loop_n_from_m.h -rw-r--r-- root/root 579 2025-03-01 14:39 ./usr/include/cctbx/math/mod.h -rw-r--r-- root/root 3845 2025-03-01 14:39 ./usr/include/cctbx/miller.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/miller/ -rw-r--r-- root/root 2269 2025-03-01 14:39 ./usr/include/cctbx/miller/amplitude_normalisation.h -rw-r--r-- root/root 9005 2025-03-01 14:39 ./usr/include/cctbx/miller/asu.h -rw-r--r-- root/root 6314 2025-03-01 14:39 ./usr/include/cctbx/miller/bins.h -rw-r--r-- root/root 1917 2025-03-01 14:39 ./usr/include/cctbx/miller/change_basis.h -rw-r--r-- root/root 7029 2025-03-01 14:39 ./usr/include/cctbx/miller/expand_to_p1.h -rw-r--r-- root/root 4463 2025-03-01 14:39 ./usr/include/cctbx/miller/f_calc_map.h -rw-r--r-- root/root 3823 2025-03-01 14:39 ./usr/include/cctbx/miller/index_generator.h -rw-r--r-- root/root 2578 2025-03-01 14:39 ./usr/include/cctbx/miller/index_span.h -rw-r--r-- root/root 12427 2025-03-01 14:39 ./usr/include/cctbx/miller/lookup_utils.h -rw-r--r-- root/root 2185 2025-03-01 14:39 ./usr/include/cctbx/miller/match.h -rw-r--r-- root/root 3514 2025-03-01 14:39 ./usr/include/cctbx/miller/match_bijvoet_mates.h -rw-r--r-- root/root 4089 2025-03-01 14:39 ./usr/include/cctbx/miller/match_indices.h -rw-r--r-- root/root 1351 2025-03-01 14:39 ./usr/include/cctbx/miller/match_multi_indices.h -rw-r--r-- root/root 1278 2025-03-01 14:39 ./usr/include/cctbx/miller/math.h -rw-r--r-- root/root 22970 2025-03-01 14:39 ./usr/include/cctbx/miller/merge_equivalents.h -rw-r--r-- root/root 8142 2025-03-01 14:39 ./usr/include/cctbx/miller/phase_integrator.h -rw-r--r-- root/root 2617 2025-03-01 14:39 ./usr/include/cctbx/miller/phase_transfer.h -rw-r--r-- root/root 1552 2025-03-01 14:39 ./usr/include/cctbx/miller/randomize_amplitude_and_phase.h -rw-r--r-- root/root 1216 2025-03-01 14:39 ./usr/include/cctbx/miller/slices.h -rw-r--r-- root/root 11625 2025-03-01 14:39 ./usr/include/cctbx/miller/sym_equiv.h -rw-r--r-- root/root 818 2025-03-01 14:39 ./usr/include/cctbx/miller/union_of_indices.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/multipolar/ -rw-r--r-- root/root 1824 2025-03-01 14:39 ./usr/include/cctbx/multipolar/aspherical.h -rw-r--r-- root/root 2029 2025-03-01 14:39 ./usr/include/cctbx/restraints.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/ -rw-r--r-- root/root 1655 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/basic.h -rw-r--r-- root/root 4194 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/brick.h -rw-r--r-- root/root 10494 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/change_of_basis_op.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/ -rw-r--r-- root/root 1762 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h -rw-r--r-- root/root 11776 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/cut.h -rw-r--r-- root/root 7108 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h -rw-r--r-- root/root 10879 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/expressions.h -rw-r--r-- root/root 2397 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/facet_collection.h -rw-r--r-- root/root 3476 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/reference_table.h -rw-r--r-- root/root 780 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/shortcuts.h -rw-r--r-- root/root 6812 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h -rw-r--r-- root/root 1538 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/find_affine.h -rw-r--r-- root/root 4708 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/group_codes.h -rw-r--r-- root/root 10758 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/lattice_symmetry.h -rw-r--r-- root/root 556 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/lattice_tr.h -rw-r--r-- root/root 688 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/miller_ops.h -rw-r--r-- root/root 1388 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/operator_from_axis_direction.h -rw-r--r-- root/root 2961 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/parse_string.h -rw-r--r-- root/root 5057 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/phase_info.h -rw-r--r-- root/root 3992 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reciprocal_space_asu.h -rw-r--r-- root/root 3959 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reciprocal_space_reference_asu.h -rw-r--r-- root/root 2553 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reference_settings.h -rw-r--r-- root/root 11934 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx.h -rw-r--r-- root/root 338 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx_hash.h -rw-r--r-- root/root 1423 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx_info.h -rw-r--r-- root/root 1180 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rotation_matrices.h -rw-r--r-- root/root 684 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/row_echelon_solve.h -rw-r--r-- root/root 20589 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rt_mx.h -rw-r--r-- root/root 386 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rt_mx_hash.h -rw-r--r-- root/root 9476 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/search_symmetry.h -rw-r--r-- root/root 859 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/select_generators.h -rw-r--r-- root/root 7767 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/seminvariant.h -rw-r--r-- root/root 8189 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_constraints.h -rw-r--r-- root/root 14431 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_symmetry.h -rw-r--r-- root/root 9909 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_symmetry_table.h -rw-r--r-- root/root 802 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/smith_normal_form.h -rw-r--r-- root/root 27947 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group.h -rw-r--r-- root/root 780 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group_hash.h -rw-r--r-- root/root 10467 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group_type.h -rw-r--r-- root/root 20819 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/sym_equiv_sites.h -rw-r--r-- root/root 13091 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/symbols.h -rw-r--r-- root/root 14006 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/sys_abs_equiv.h -rw-r--r-- root/root 16317 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tensor_rank_2.h -rw-r--r-- root/root 7643 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tensors.h -rw-r--r-- root/root 1629 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_group.h -rw-r--r-- root/root 391 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_group_hash.h -rw-r--r-- root/root 6560 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_vec.h -rw-r--r-- root/root 370 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_vec_hash.h -rw-r--r-- root/root 458 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/utils.h -rw-r--r-- root/root 10050 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/wyckoff.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/symmetry_search/ -rw-r--r-- root/root 6094 2025-03-01 14:39 ./usr/include/cctbx/symmetry_search/translation_refinement.h -rw-r--r-- root/root 492 2025-03-01 14:39 ./usr/include/cctbx/tagged_value.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/translation_search/ -rw-r--r-- root/root 2224 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/ -rw-r--r-- root/root 2516 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/combinations.h -rw-r--r-- root/root 1521 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/intermediates.h -rw-r--r-- root/root 8723 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/summations.h -rw-r--r-- root/root 4175 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_terms.h -rw-r--r-- root/root 138 2025-03-01 14:39 ./usr/include/cctbx/translation_search/namespace.h -rw-r--r-- root/root 1358 2025-03-01 14:39 ./usr/include/cctbx/translation_search/symmetry_flags.h -rw-r--r-- root/root 43427 2025-03-01 14:39 ./usr/include/cctbx/uctbx.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/uctbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/uctbx/determine_unit_cell/ -rw-r--r-- root/root 70019 2025-03-01 14:39 ./usr/include/cctbx/uctbx/determine_unit_cell/NCDist.h -rw-r--r-- root/root 11698 2025-03-01 14:39 ./usr/include/cctbx/uctbx/fast_minimum_reduction.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/xray/ -rw-r--r-- root/root 3980 2025-03-01 14:39 ./usr/include/cctbx/xray/conversions.h -rw-r--r-- root/root 13500 2025-03-01 14:39 ./usr/include/cctbx/xray/curvatures_simple.h -rw-r--r-- root/root 9671 2025-03-01 14:39 ./usr/include/cctbx/xray/each_hkl_gradients_direct.h -rw-r--r-- root/root 2948 2025-03-01 14:39 ./usr/include/cctbx/xray/extinction.h -rw-r--r-- root/root 27733 2025-03-01 14:39 ./usr/include/cctbx/xray/f_model.h -rw-r--r-- root/root 30956 2025-03-01 14:39 ./usr/include/cctbx/xray/fast_gradients.h -rw-r--r-- root/root 1092 2025-03-01 14:39 ./usr/include/cctbx/xray/gradient_flags.h -rw-r--r-- root/root 17921 2025-03-01 14:39 ./usr/include/cctbx/xray/gradients_direct.h -rw-r--r-- root/root 11438 2025-03-01 14:39 ./usr/include/cctbx/xray/grouped_data.h -rw-r--r-- root/root 3294 2025-03-01 14:39 ./usr/include/cctbx/xray/hr_ht_cache.h -rw-r--r-- root/root 9432 2025-03-01 14:39 ./usr/include/cctbx/xray/minimization.h -rw-r--r-- root/root 17272 2025-03-01 14:39 ./usr/include/cctbx/xray/observations.h -rw-r--r-- root/root 223 2025-03-01 14:39 ./usr/include/cctbx/xray/packing_order.h -rw-r--r-- root/root 2809 2025-03-01 14:39 ./usr/include/cctbx/xray/parameter_map.h -rw-r--r-- root/root 9310 2025-03-01 14:39 ./usr/include/cctbx/xray/sampled_model_density.h -rw-r--r-- root/root 25770 2025-03-01 14:39 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root/root 6564 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/correlation.h -rw-r--r-- root/root 6188 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/least_squares.h -rw-r--r-- root/root 5596 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mlf.h -rw-r--r-- root/root 10624 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mlhl.h -rw-r--r-- root/root 4725 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mli.h -rw-r--r-- root/root 14039 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/shelxl_wght_ls.hpp -rw-r--r-- root/root 1778 2025-03-01 14:39 ./usr/include/cctbx/xray/twin_component.h -rw-r--r-- root/root 53162 2025-03-01 14:39 ./usr/include/cctbx/xray/twin_targets.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cma_es/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cma_es/cma/ -rw-r--r-- root/root 4266 2025-03-01 14:39 ./usr/include/cma_es/cma/cmaes.h -rw-r--r-- root/root 2405 2025-03-01 14:39 ./usr/include/cma_es/cma/cmaes_interface.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/ drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/array_family/ -rw-r--r-- root/root 15026 2025-01-08 11:53 ./usr/include/dxtbx/array_family/flex_table.h -rw-r--r-- root/root 40157 2025-01-08 11:53 ./usr/include/dxtbx/array_family/flex_table_suite.h -rw-r--r-- root/root 284 2025-01-08 11:53 ./usr/include/dxtbx/array_family/ref_pickle_double_buffered.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/boost_python/ -rw-r--r-- root/root 590 2025-01-08 11:53 ./usr/include/dxtbx/boost_python/compression.h -rw-r--r-- root/root 2261 2025-01-08 11:53 ./usr/include/dxtbx/error.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/format/ drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/format/boost_python/ -rw-r--r-- root/root 202 2025-01-08 11:53 ./usr/include/dxtbx/format/boost_python/cbf_read_buffer.h -rw-r--r-- root/root 7657 2025-01-08 11:53 ./usr/include/dxtbx/format/image.h -rw-r--r-- root/root 40730 2025-01-08 11:53 ./usr/include/dxtbx/imageset.h drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/masking/ -rw-r--r-- root/root 12547 2025-01-08 11:53 ./usr/include/dxtbx/masking/goniometer_shadow_masking.h -rw-r--r-- root/root 7330 2025-01-08 11:53 ./usr/include/dxtbx/masking/masking.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/model/ -rw-r--r-- root/root 32090 2025-01-08 11:53 ./usr/include/dxtbx/model/beam.h drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/ -rw-r--r-- root/root 6976 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/pickle_suite.h -rw-r--r-- root/root 2383 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/to_from_dict.h -rw-r--r-- root/root 51769 2025-01-08 11:53 ./usr/include/dxtbx/model/crystal.h -rw-r--r-- root/root 24739 2025-01-08 11:53 ./usr/include/dxtbx/model/detector.h -rw-r--r-- root/root 7095 2025-01-08 11:53 ./usr/include/dxtbx/model/experiment.h -rw-r--r-- root/root 18502 2025-01-08 11:53 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root/root 3545 2025-01-08 11:53 ./usr/include/dxtbx/model/spectrum.h -rw-r--r-- root/root 13860 2025-01-08 11:53 ./usr/include/dxtbx/model/virtual_panel.h -rw-r--r-- root/root 246 2025-03-01 14:39 ./usr/include/fem.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/fem/ -rw-r--r-- root/root 972 2025-03-01 14:39 ./usr/include/fem/arr.hpp -rw-r--r-- root/root 2435 2025-03-01 14:39 ./usr/include/fem/arr_and_str_indices.hpp -rw-r--r-- root/root 4671 2025-03-01 14:39 ./usr/include/fem/arr_ref.hpp -rw-r--r-- root/root 3650 2025-03-01 14:39 ./usr/include/fem/arr_size.hpp -rw-r--r-- root/root 1425 2025-03-01 14:39 ./usr/include/fem/close_chain.hpp -rw-r--r-- root/root 2669 2025-03-01 14:39 ./usr/include/fem/common.hpp -rw-r--r-- root/root 7532 2025-03-01 14:39 ./usr/include/fem/data.hpp -rw-r--r-- root/root 2345 2025-03-01 14:39 ./usr/include/fem/data_of_type.hpp -rw-r--r-- root/root 668 2025-03-01 14:39 ./usr/include/fem/data_type_star.hpp -rw-r--r-- root/root 12115 2025-03-01 14:39 ./usr/include/fem/dimension.hpp -rw-r--r-- root/root 886 2025-03-01 14:39 ./usr/include/fem/do.hpp -rw-r--r-- root/root 278 2025-03-01 14:39 ./usr/include/fem/error_utils.hpp -rw-r--r-- root/root 1942 2025-03-01 14:39 ./usr/include/fem/file_positioning_chain.hpp -rw-r--r-- root/root 8549 2025-03-01 14:39 ./usr/include/fem/format.hpp -rw-r--r-- root/root 4812 2025-03-01 14:39 ./usr/include/fem/inquire_chain.hpp -rw-r--r-- root/root 12551 2025-03-01 14:39 ./usr/include/fem/intrinsics.hpp -rw-r--r-- root/root 1667 2025-03-01 14:39 ./usr/include/fem/intrinsics_extra.hpp -rw-r--r-- root/root 11046 2025-03-01 14:39 ./usr/include/fem/io.hpp -rw-r--r-- root/root 406 2025-03-01 14:39 ./usr/include/fem/io_exceptions.hpp -rw-r--r-- root/root 4592 2025-03-01 14:39 ./usr/include/fem/main.hpp -rw-r--r-- root/root 888 2025-03-01 14:39 ./usr/include/fem/major_types.hpp -rw-r--r-- root/root 2759 2025-03-01 14:39 ./usr/include/fem/open_chain.hpp -rw-r--r-- root/root 19903 2025-03-01 14:39 ./usr/include/fem/read.hpp -rw-r--r-- root/root 593 2025-03-01 14:39 ./usr/include/fem/size_t.hpp -rw-r--r-- root/root 166 2025-03-01 14:39 ./usr/include/fem/star.hpp -rw-r--r-- root/root 1403 2025-03-01 14:39 ./usr/include/fem/stop.hpp -rw-r--r-- root/root 3031 2025-03-01 14:39 ./usr/include/fem/str.hpp -rw-r--r-- root/root 8322 2025-03-01 14:39 ./usr/include/fem/str_arr_ref.hpp -rw-r--r-- root/root 4628 2025-03-01 14:39 ./usr/include/fem/str_ref.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/fem/utils/ -rw-r--r-- root/root 1587 2025-03-01 14:39 ./usr/include/fem/utils/char.hpp -rw-r--r-- root/root 4884 2025-03-01 14:39 ./usr/include/fem/utils/double_to_string.hpp -rw-r--r-- root/root 3927 2025-03-01 14:39 ./usr/include/fem/utils/equivalence.hpp -rw-r--r-- root/root 450 2025-03-01 14:39 ./usr/include/fem/utils/int_types.hpp -rw-r--r-- root/root 1757 2025-03-01 14:39 ./usr/include/fem/utils/misc.hpp -rw-r--r-- root/root 2779 2025-03-01 14:39 ./usr/include/fem/utils/path.hpp 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./usr/include/gltbx/error_utils.h -rw-r--r-- root/root 5200 2025-03-01 14:39 ./usr/include/gltbx/fonts_ucs.h -rw-r--r-- root/root 570164 2025-03-01 14:39 ./usr/include/gltbx/glext.h -rw-r--r-- root/root 574 2025-03-01 14:39 ./usr/include/gltbx/include_opengl.h -rw-r--r-- root/root 7498 2025-03-01 14:39 ./usr/include/gltbx/pointer_args_bpl.h -rw-r--r-- root/root 10009 2025-03-01 14:39 ./usr/include/gltbx/quadrics.h -rw-r--r-- root/root 655 2025-03-01 14:39 ./usr/include/gltbx/special_wrapper_support.h -rw-r--r-- root/root 317 2025-03-01 14:39 ./usr/include/gltbx/util.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/detectors/ -rw-r--r-- root/root 963 2025-03-01 14:39 ./usr/include/iotbx/detectors/bruker.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/detectors/context/ -rw-r--r-- root/root 2717 2025-03-01 14:39 ./usr/include/iotbx/detectors/context/spot_xy_convention.h -rw-r--r-- root/root 42787 2025-03-01 14:39 ./usr/include/iotbx/detectors/display.h -rw-r--r-- root/root 1791 2025-03-01 14:39 ./usr/include/iotbx/detectors/image_divider.h -rw-r--r-- root/root 9644 2025-03-01 14:39 ./usr/include/iotbx/detectors/scanbox.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/dsn6/ -rw-r--r-- root/root 4813 2025-03-01 14:39 ./usr/include/iotbx/dsn6/dsn6.hpp -rw-r--r-- root/root 2301 2025-03-01 14:39 ./usr/include/iotbx/error.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/mtz/ -rw-r--r-- root/root 8100 2025-03-01 14:39 ./usr/include/iotbx/mtz/batch.h -rw-r--r-- root/root 6803 2025-03-01 14:39 ./usr/include/iotbx/mtz/column.h -rw-r--r-- root/root 2630 2025-03-01 14:39 ./usr/include/iotbx/mtz/crystal.h -rw-r--r-- root/root 2685 2025-03-01 14:39 ./usr/include/iotbx/mtz/dataset.h -rw-r--r-- root/root 18582 2025-03-01 14:39 ./usr/include/iotbx/mtz/object.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/pdb/ -rw-r--r-- root/root 10301 2025-03-01 14:39 ./usr/include/iotbx/pdb/common_residue_names.h -rw-r--r-- root/root 44718 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy.h -rw-r--r-- root/root 3430 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy_atoms.h -rw-r--r-- root/root 4507 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy_bpl.h -rw-r--r-- root/root 705 2025-03-01 14:39 ./usr/include/iotbx/pdb/hybrid_36_c.h -rw-r--r-- root/root 661 2025-03-01 14:39 ./usr/include/iotbx/pdb/hybrid_36_cpp.h -rw-r--r-- root/root 13241 2025-03-01 14:39 ./usr/include/iotbx/pdb/input.h -rw-r--r-- root/root 24726 2025-03-01 14:39 ./usr/include/iotbx/pdb/modified_aa_names.h -rw-r--r-- root/root 9390 2025-03-01 14:39 ./usr/include/iotbx/pdb/modified_rna_dna_names.h -rw-r--r-- root/root 709 2025-03-01 14:39 ./usr/include/iotbx/pdb/namespace.h -rw-r--r-- root/root 29683 2025-03-01 14:39 ./usr/include/iotbx/pdb/rna_dna_atom_names.h -rw-r--r-- root/root 6531 2025-03-01 14:39 ./usr/include/iotbx/pdb/small_str.h -rw-r--r-- root/root 653 2025-03-01 14:39 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./usr/include/mmtbx/alignment/tables.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/building/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/building/loop_closure/ -rw-r--r-- root/root 3964 2025-03-01 14:39 ./usr/include/mmtbx/building/loop_closure/ccd.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/ -rw-r--r-- root/root 55010 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/bulk_solvent.h -rw-r--r-- root/root 6569 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/mosaic.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/den/ -rw-r--r-- root/root 3484 2025-03-01 14:39 ./usr/include/mmtbx/den/den.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/dynamics/ -rw-r--r-- root/root 1809 2025-03-01 14:39 ./usr/include/mmtbx/dynamics/dynamics.h -rw-r--r-- root/root 2174 2025-03-01 14:39 ./usr/include/mmtbx/error.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/f_model/ -rw-r--r-- root/root 11975 2025-03-01 14:39 ./usr/include/mmtbx/f_model/f_model.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry/ -rw-r--r-- root/root 1507 2025-03-01 14:39 ./usr/include/mmtbx/geometry/asa.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/ -rw-r--r-- root/root 3314 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/containment.hpp -rw-r--r-- root/root 3812 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/indexing.hpp -rw-r--r-- root/root 8938 2025-03-01 14:39 ./usr/include/mmtbx/geometry/calculator.hpp -rw-r--r-- root/root 2763 2025-03-01 14:39 ./usr/include/mmtbx/geometry/clash.hpp -rw-r--r-- root/root 3253 2025-03-01 14:39 ./usr/include/mmtbx/geometry/containment.hpp -rw-r--r-- root/root 3678 2025-03-01 14:39 ./usr/include/mmtbx/geometry/flattening.hpp -rw-r--r-- root/root 4731 2025-03-01 14:39 ./usr/include/mmtbx/geometry/indexing.hpp -rw-r--r-- root/root 933 2025-03-01 14:39 ./usr/include/mmtbx/geometry/overlap.hpp -rw-r--r-- root/root 1897 2025-03-01 14:39 ./usr/include/mmtbx/geometry/primitive.hpp -rw-r--r-- root/root 999 2025-03-01 14:39 ./usr/include/mmtbx/geometry/sphere_surface_sampling.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/ -rw-r--r-- root/root 13674 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/ramachandran.h -rw-r--r-- root/root 2792 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/reference_coordinate.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/hydrogens/ -rw-r--r-- root/root 12268 2025-03-01 14:39 ./usr/include/mmtbx/hydrogens/hydrogens.h -rw-r--r-- root/root 190 2025-03-01 14:39 ./usr/include/mmtbx/import_scitbx_af.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/masks/ -rw-r--r-- root/root 12676 2025-03-01 14:39 ./usr/include/mmtbx/masks/atom_mask.h -rw-r--r-- root/root 3127 2025-03-01 14:39 ./usr/include/mmtbx/masks/grid_symop.h -rw-r--r-- root/root 250 2025-03-01 14:39 ./usr/include/mmtbx/masks/util.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/ -rw-r--r-- root/root 30357 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/max_lik.h -rw-r--r-- root/root 19343 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005.h -rw-r--r-- root/root 9857 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h -rw-r--r-- root/root 9856 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h -rw-r--r-- root/root 2145 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005.h -rw-r--r-- root/root 2161 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h -rw-r--r-- root/root 773 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h -rw-r--r-- root/root 978 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/wat_dist_r_0_1.h -rw-r--r-- root/root 1430 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/wat_dist_r_2p0_2p5.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/ncs/ -rw-r--r-- root/root 9388 2025-03-01 14:39 ./usr/include/mmtbx/ncs/cartesian_restraints.h -rw-r--r-- root/root 13350 2025-03-01 14:39 ./usr/include/mmtbx/ncs/tncs.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/pair_interaction/ -rw-r--r-- root/root 15206 2025-03-01 14:39 ./usr/include/mmtbx/pair_interaction/interaction.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/probe/ -rw-r--r-- root/root 882 2025-03-01 14:39 ./usr/include/mmtbx/probe/Common.h -rw-r--r-- root/root 4957 2025-03-01 14:39 ./usr/include/mmtbx/probe/DotSpheres.h -rw-r--r-- root/root 25534 2025-03-01 14:39 ./usr/include/mmtbx/probe/Scoring.h -rw-r--r-- root/root 7848 2025-03-01 14:39 ./usr/include/mmtbx/probe/SpatialQuery.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/reduce/ -rw-r--r-- root/root 4600 2025-03-01 14:39 ./usr/include/mmtbx/reduce/InteractionGraph.h -rw-r--r-- root/root 16833 2025-03-01 14:39 ./usr/include/mmtbx/reduce/Optimizers.h -rw-r--r-- root/root 5240 2025-03-01 14:39 ./usr/include/mmtbx/reduce/PositionReturn.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/rotamer/ -rw-r--r-- root/root 10098 2025-03-01 14:39 ./usr/include/mmtbx/rotamer/fit.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/rsr/ -rw-r--r-- root/root 13285 2025-03-01 14:39 ./usr/include/mmtbx/rsr/rsr.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/scaling/ -rw-r--r-- root/root 29126 2025-03-01 14:39 ./usr/include/mmtbx/scaling/absolute_scaling.h -rw-r--r-- root/root 25744 2025-03-01 14:39 ./usr/include/mmtbx/scaling/outlier.h -rw-r--r-- root/root 57302 2025-03-01 14:39 ./usr/include/mmtbx/scaling/relative_scaling.h -rw-r--r-- root/root 7587 2025-03-01 14:39 ./usr/include/mmtbx/scaling/scaling.h -rw-r--r-- root/root 45741 2025-03-01 14:39 ./usr/include/mmtbx/scaling/twinning.h drwxr-xr-x root/root 0 2025-03-01 14:39 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./usr/include/mmtbx/validation/ramachandran/rama8000_tables.h -rw-r--r-- root/root 5427 2025-03-01 14:39 ./usr/include/mmtbx/validation/ramachandran/rama_eval.h -rw-r--r-- root/root 322 2025-03-01 14:39 ./usr/include/noexcept_false.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/omptbx/ -rw-r--r-- root/root 512 2025-03-01 14:39 ./usr/include/omptbx/lock.h -rw-r--r-- root/root 214 2025-03-01 14:39 ./usr/include/omptbx/omp_or_stubs.h -rw-r--r-- root/root 1124 2025-03-01 14:39 ./usr/include/omptbx/stubs.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/apps/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/apps/stills/ -rw-r--r-- root/root 25904 2025-03-01 14:39 ./usr/include/rstbx/apps/stills/simple_integration.h -rw-r--r-- root/root 3597 2025-03-01 14:39 ./usr/include/rstbx/backplane.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/bandpass/ -rw-r--r-- root/root 6217 2025-10-24 17:38 ./usr/include/rstbx/bandpass/parameters.h -rw-r--r-- root/root 2295 2025-03-01 14:39 ./usr/include/rstbx/bandpass/subpixel_joint_model.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/bpcx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/bpcx/detector_model/ -rw-r--r-- root/root 1945 2025-03-01 14:39 ./usr/include/rstbx/bpcx/detector_model/sensor.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/diffraction/ -rw-r--r-- root/root 9212 2025-03-01 14:39 ./usr/include/rstbx/diffraction/ewald_sphere.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/diffraction/fastbragg/ -rw-r--r-- root/root 22023 2025-03-01 14:39 ./usr/include/rstbx/diffraction/fastbragg/fastbragg.h -rw-r--r-- root/root 1224 2025-03-01 14:39 ./usr/include/rstbx/diffraction/partial_spot_position_partial_H.h -rw-r--r-- root/root 3189 2025-03-01 14:39 ./usr/include/rstbx/diffraction/reflection_range.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/dps_core/ -rw-r--r-- root/root 1371 2025-03-01 14:39 ./usr/include/rstbx/dps_core/direction.h -rw-r--r-- root/root 2176 2025-03-01 14:39 ./usr/include/rstbx/dps_core/directional_fft.h -rw-r--r-- root/root 3505 2025-03-01 14:39 ./usr/include/rstbx/dps_core/dps_core.h -rw-r--r-- root/root 244 2025-03-01 14:39 ./usr/include/rstbx/dps_core/spotclass.h -rw-r--r-- root/root 175 2025-03-01 14:39 ./usr/include/rstbx/import_scitbx_af.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/indexing_api/ -rw-r--r-- root/root 2118 2025-03-01 14:39 ./usr/include/rstbx/indexing_api/indexing_api.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/simage/ -rw-r--r-- root/root 6568 2025-03-01 14:39 ./usr/include/rstbx/simage/image_simple.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/simulation/ -rw-r--r-- root/root 13257 2025-03-01 14:39 ./usr/include/rstbx/simulation/sim_xfel1.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/symmetry/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/symmetry/constraints/ -rw-r--r-- root/root 4456 2025-03-01 14:39 ./usr/include/rstbx/symmetry/constraints/a_g_conversion.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/array_family/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/ -rw-r--r-- root/root 6459 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid.h -rw-r--r-- root/root 7718 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_padded.h -rw-r--r-- root/root 3411 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_padded_periodic.h -rw-r--r-- root/root 2354 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_periodic.h -rw-r--r-- root/root 788 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_index_1d_calculator.h -rw-r--r-- root/root 4339 2025-03-01 14:39 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14:39 ./usr/include/scitbx/array_family/array_adaptor.h -rw-r--r-- root/root 1867 2025-03-01 14:39 ./usr/include/scitbx/array_family/block_iterator.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/array_family/boost_python/ -rw-r--r-- root/root 2425 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/byte_str.h -rw-r--r-- root/root 3844 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/c_grid_flex_conversions.h -rw-r--r-- root/root 537 2025-10-24 17:38 ./usr/include/scitbx/array_family/boost_python/flex_fwd.h -rw-r--r-- root/root 2617 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_helpers.h -rw-r--r-- root/root 2307 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_pickle_double_buffered.h -rw-r--r-- root/root 6286 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_pickle_single_buffered.h -rw-r--r-- root/root 36198 2025-03-01 14:39 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14:39 ./usr/include/scitbx/array_family/boost_python/ref_pickle_double_buffered.h -rw-r--r-- root/root 1662 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/selections_wrapper.h -rw-r--r-- root/root 4267 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/shared_flat_conversions.h -rw-r--r-- root/root 3210 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/shared_flex_conversions.h -rw-r--r-- root/root 4211 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/shared_wrapper.h -rw-r--r-- root/root 1086 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/utils.h -rw-r--r-- root/root 1158 2025-03-01 14:39 ./usr/include/scitbx/array_family/counts.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/array_family/detail/ -rw-r--r-- root/root 515 2025-03-01 14:39 ./usr/include/scitbx/array_family/detail/auto_allocator.h -rw-r--r-- root/root 9246 2025-03-01 14:39 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14:39 ./usr/include/scitbx/array_family/flex_types.h -rw-r--r-- root/root 1003 2025-03-01 14:39 ./usr/include/scitbx/array_family/initialiser.h -rw-r--r-- root/root 2075 2025-03-01 14:39 ./usr/include/scitbx/array_family/linear_interpolation.h -rw-r--r-- root/root 2612 2025-03-01 14:39 ./usr/include/scitbx/array_family/loops.h -rw-r--r-- root/root 2774 2025-03-01 14:39 ./usr/include/scitbx/array_family/memory.h -rw-r--r-- root/root 3825 2025-03-01 14:39 ./usr/include/scitbx/array_family/misc_functions.h -rw-r--r-- root/root 7239 2025-10-24 17:38 ./usr/include/scitbx/array_family/operator_traits_builtin.h -rw-r--r-- root/root 4057 2025-03-01 14:39 ./usr/include/scitbx/array_family/owning_ref.h -rw-r--r-- root/root 2420 2025-03-01 14:39 ./usr/include/scitbx/array_family/range.h -rw-r--r-- root/root 14978 2025-03-01 14:39 ./usr/include/scitbx/array_family/ref.h -rw-r--r-- root/root 62353 2025-10-24 17:38 ./usr/include/scitbx/array_family/ref_algebra.h -rw-r--r-- root/root 1534 2025-10-24 17:38 ./usr/include/scitbx/array_family/ref_apply.h -rw-r--r-- root/root 2355 2025-03-01 14:39 ./usr/include/scitbx/array_family/ref_matrix.h -rw-r--r-- root/root 14796 2025-03-01 14:39 ./usr/include/scitbx/array_family/ref_reductions.h -rw-r--r-- root/root 6685 2025-03-01 14:39 ./usr/include/scitbx/array_family/selections.h -rw-r--r-- root/root 3152 2025-03-01 14:39 ./usr/include/scitbx/array_family/shared.h -rw-r--r-- root/root 53775 2025-10-24 17:38 ./usr/include/scitbx/array_family/shared_algebra.h -rw-r--r-- root/root 1416 2025-10-24 17:38 ./usr/include/scitbx/array_family/shared_apply.h -rw-r--r-- root/root 11091 2025-03-01 14:39 ./usr/include/scitbx/array_family/shared_plain.h -rw-r--r-- root/root 1470 2025-10-24 17:38 ./usr/include/scitbx/array_family/shared_plain_apply.h -rw-r--r-- root/root 3400 2025-10-24 17:38 ./usr/include/scitbx/array_family/shared_reductions.h -rw-r--r-- root/root 604 2025-03-01 14:39 ./usr/include/scitbx/array_family/simple_io.h -rw-r--r-- root/root 482 2025-03-01 14:39 ./usr/include/scitbx/array_family/simple_tiny_io.h -rw-r--r-- root/root 3797 2025-03-01 14:39 ./usr/include/scitbx/array_family/slice.h -rw-r--r-- root/root 1599 2025-03-01 14:39 ./usr/include/scitbx/array_family/small.h -rw-r--r-- root/root 58690 2025-10-24 17:38 ./usr/include/scitbx/array_family/small_algebra.h -rw-r--r-- root/root 1456 2025-10-24 17:38 ./usr/include/scitbx/array_family/small_apply.h -rw-r--r-- root/root 4156 2025-03-01 14:39 ./usr/include/scitbx/array_family/small_plain.h -rw-r--r-- root/root 1510 2025-10-24 17:38 ./usr/include/scitbx/array_family/small_plain_apply.h -rw-r--r-- root/root 3714 2025-10-24 17:38 ./usr/include/scitbx/array_family/small_reductions.h -rw-r--r-- root/root 2319 2025-03-01 14:39 ./usr/include/scitbx/array_family/sort.h -rw-r--r-- root/root 1013 2025-03-01 14:39 ./usr/include/scitbx/array_family/tiny.h -rw-r--r-- root/root 55109 2025-10-24 17:38 ./usr/include/scitbx/array_family/tiny_algebra.h -rw-r--r-- root/root 1415 2025-10-24 17:38 ./usr/include/scitbx/array_family/tiny_apply.h -rw-r--r-- root/root 640 2025-03-01 14:39 ./usr/include/scitbx/array_family/tiny_mat_ref.h -rw-r--r-- root/root 1732 2025-03-01 14:39 ./usr/include/scitbx/array_family/tiny_plain.h -rw-r--r-- root/root 1469 2025-10-24 17:38 ./usr/include/scitbx/array_family/tiny_plain_apply.h -rw-r--r-- root/root 3654 2025-10-24 17:38 ./usr/include/scitbx/array_family/tiny_reductions.h -rw-r--r-- root/root 2623 2025-03-01 14:39 ./usr/include/scitbx/array_family/tiny_types.h -rw-r--r-- root/root 1431 2025-03-01 14:39 ./usr/include/scitbx/array_family/type_traits.h -rw-r--r-- root/root 4381 2025-03-01 14:39 ./usr/include/scitbx/array_family/versa.h -rw-r--r-- root/root 62279 2025-10-24 17:38 ./usr/include/scitbx/array_family/versa_algebra.h -rw-r--r-- root/root 1536 2025-10-24 17:38 ./usr/include/scitbx/array_family/versa_apply.h -rw-r--r-- root/root 19672 2025-03-01 14:39 ./usr/include/scitbx/array_family/versa_matrix.h -rw-r--r-- root/root 8768 2025-03-01 14:39 ./usr/include/scitbx/array_family/versa_plain.h -rw-r--r-- root/root 1590 2025-10-24 17:38 ./usr/include/scitbx/array_family/versa_plain_apply.h -rw-r--r-- root/root 4056 2025-10-24 17:38 ./usr/include/scitbx/array_family/versa_reductions.h -rw-r--r-- root/root 2517 2025-03-01 14:39 ./usr/include/scitbx/auto_array.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/boost_python/ -rw-r--r-- root/root 933 2025-03-01 14:39 ./usr/include/scitbx/boost_python/array_as_list.h -rw-r--r-- root/root 9144 2025-03-01 14:39 ./usr/include/scitbx/boost_python/container_conversions.h -rw-r--r-- root/root 1093 2025-03-01 14:39 ./usr/include/scitbx/boost_python/cstringio_utils.h -rw-r--r-- root/root 539 2025-03-01 14:39 ./usr/include/scitbx/boost_python/is_polymorphic_workaround.h -rw-r--r-- root/root 863 2025-03-01 14:39 ./usr/include/scitbx/boost_python/iterator_range.hpp -rw-r--r-- root/root 975 2025-03-01 14:39 ./usr/include/scitbx/boost_python/iterator_wrappers.h 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./usr/include/scitbx/lbfgs.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/lbfgs/ -rw-r--r-- root/root 4735 2025-03-01 14:39 ./usr/include/scitbx/lbfgs/drop_convergence_test.h -rw-r--r-- root/root 43801 2025-03-01 14:39 ./usr/include/scitbx/lbfgs/raw.h -rw-r--r-- root/root 42929 2025-03-01 14:39 ./usr/include/scitbx/lbfgs/raw_reference.h -rw-r--r-- root/root 934 2025-10-24 17:38 ./usr/include/scitbx/lbfgs_fem.hpp -rw-r--r-- root/root 19103 2025-03-01 14:39 ./usr/include/scitbx/lbfgsb.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/lbfgsb/ -rw-r--r-- root/root 3477 2025-03-01 14:39 ./usr/include/scitbx/lbfgsb/fortran_interface.h -rw-r--r-- root/root 144153 2025-03-01 14:39 ./usr/include/scitbx/lbfgsb/raw.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/line_search/ -rw-r--r-- root/root 2923 2025-03-01 14:39 ./usr/include/scitbx/line_search/more_thuente_1994.h -rw-r--r-- root/root 21022 2025-03-01 14:39 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drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/ -rw-r--r-- root/root 3504 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/distl.h -rw-r--r-- root/root 837 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/libdistl.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/tbxx/ -rw-r--r-- root/root 487 2025-03-01 14:39 ./usr/include/tbxx/alignment.h -rw-r--r-- root/root 1760 2025-03-01 14:39 ./usr/include/tbxx/error_utils.hpp -rw-r--r-- root/root 2811 2025-03-01 14:39 ./usr/include/tbxx/libc_backtrace.hpp -rw-r--r-- root/root 2857 2025-03-01 14:39 ./usr/include/tbxx/optional_copy.hpp -rw-r--r-- root/root 1493 2025-03-01 14:39 ./usr/include/tbxx/pretty_type_name.hpp -rw-r--r-- root/root 2124 2025-03-01 14:39 ./usr/include/tbxx/time_accu.hpp drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/python3.13/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/python3.13/include -> ../../../include/cctbx drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libann_adaptor.so -> libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libasymmetric_map.so -> libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcbf-private.so -> libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libccp4io.so -> libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx.so -> libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libomptbx.so -> libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/librstbx.so -> librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libspotfinder.so -> libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx-dev/ -rw-r--r-- root/root 3740 2025-10-24 17:38 ./usr/share/doc/libcctbx-dev/changelog.Debian.gz -rw-r--r-- root/root 4127 2025-03-01 14:39 ./usr/share/doc/libcctbx-dev/changelog.gz -rw-r--r-- root/root 38654 2024-11-13 10:35 ./usr/share/doc/libcctbx-dev/copyright libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb ----------------------------------------------------- new Debian package, version 2.0. size 10223272 bytes: control archive=1476 bytes. 1157 bytes, 12 lines control 2101 bytes, 20 lines md5sums Package: libcctbx0-dbgsym Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Science Maintainers Installed-Size: 14561 Depends: libcctbx0 (= 2025.2+ds2+~3.23.0+ds1-1) Section: debug Priority: optional Description: debug symbols for libcctbx0 Build-Ids: 11de360a7aff8a784f39767549d4131b616257d5 142be17591b1b165038e8f57580693c74591fb28 23b54bb7d48c846e4c21168155e2a31983b8b3ec 2e85f235fd3af38d4d83c3235d63a1fa840bb0b7 37ce7005d0ed72626eead4d0cbb37214403ef61b 42753dd703e5fd063f77c2c50dab6a3060f95bbb 4fe138c5dbf615f7d6c872b6d3ccf679ad733b92 5a2fdbabf31a39dd2bc4318408eb068c56e01e6c 7a8fe8566f98880b17f753c2389020df99e68460 81f4878d28fc8ae68c0cb6500dc47311769b4809 a46c5e7eb0754da4d30b64de0308710108ac96f1 b71292dcea19b8c75bdd011d928d591cbe11e277 bc8cd920b40c4c2b93608a8654ad08ae33fe0843 be5cb423c71ad72bdf90ef66bb4eb3176b1f32a7 c9a8e1143c8cea93688737144dae534a0565ece1 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./usr/lib/debug/.build-id/e9/a27da85b13f39e4e0f943a4ce1ff7d3c53e1a3.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.dwz/riscv64-linux-gnu/ -rw-r--r-- root/root 345304 2025-10-24 17:38 ./usr/lib/debug/.dwz/riscv64-linux-gnu/libcctbx0.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx0-dbgsym -> libcctbx0 libcctbx0_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb ---------------------------------------------- new Debian package, version 2.0. size 2305448 bytes: control archive=2548 bytes. 3055 bytes, 55 lines control 1825 bytes, 22 lines md5sums 1057 bytes, 19 lines shlibs 66 bytes, 2 lines triggers Package: libcctbx0 Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Architecture: riscv64 Maintainer: Debian Science Maintainers Installed-Size: 10117 Depends: libann-cctbx0 (>= 1.1.2+doc), libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py313, libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0t64 (>= 8.0.0), libgcc-s1 (>= 4.0), libstdc++6 (>= 13.1) Section: libs Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - runtime libraries Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide the cctbx runtime libraries. drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 -rw-r--r-- root/root 59968 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 -rw-r--r-- root/root 429056 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcbf-private.so.0 -> libcbf-private.so.0.0.1 -rw-r--r-- root/root 68504 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libccp4io.so.0 -> libccp4io.so.0.0.1 -rw-r--r-- root/root 6240 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx.so.0 -> libcctbx.so.0.0.1 -rw-r--r-- root/root 2690568 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 -rw-r--r-- root/root 3486280 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 -rw-r--r-- root/root 178872 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 -rw-r--r-- root/root 261304 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 -rw-r--r-- root/root 1396248 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 -rw-r--r-- root/root 84800 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 -rw-r--r-- root/root 330896 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 -rw-r--r-- root/root 80832 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libomptbx.so.0 -> libomptbx.so.0.0.1 -rw-r--r-- root/root 10456 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/librstbx.so.0 -> librstbx.so.0.0.1 -rw-r--r-- root/root 146280 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 -rw-r--r-- root/root 31368 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 -rw-r--r-- root/root 27144 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 -rw-r--r-- root/root 14512 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 -rw-r--r-- root/root 584432 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libspotfinder.so.0 -> libspotfinder.so.0.0.1 -rw-r--r-- root/root 384008 2025-10-24 17:38 ./usr/lib/riscv64-linux-gnu/libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx0/ -rw-r--r-- root/root 3740 2025-10-24 17:38 ./usr/share/doc/libcctbx0/changelog.Debian.gz -rw-r--r-- root/root 4127 2025-03-01 14:39 ./usr/share/doc/libcctbx0/changelog.gz -rw-r--r-- root/root 38654 2024-11-13 10:35 ./usr/share/doc/libcctbx0/copyright python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb --------------------------------------------------------- new Debian package, version 2.0. size 148698272 bytes: control archive=9248 bytes. 8673 bytes, 12 lines control 21503 bytes, 203 lines md5sums Package: python3-cctbx-dbgsym Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Science Maintainers Installed-Size: 292604 Depends: python3-cctbx (= 2025.2+ds2+~3.23.0+ds1-1) Section: debug Priority: optional Description: debug symbols for python3-cctbx Build-Ids: 002089f4960ee85a3861d1a67fffdcd3df12f1d4 00970e52c567943c1b07cbbf82c1a27005dc6a20 01cb60ac98a98e92754130557761c9b48a3358a3 042cbdda70a0d6ae7a5f736268f5da07ffedccf2 06a5c7d7fd9fd63f47404f8e3882b257081b0e38 0705ace213958fd61688253bbee832442cb2e610 071864c6bb6b043955677aed4faba0297dd9f2c1 0b52d57a7c0cd0bfb9945e041646c8b9876e2986 0b6f52d0beffb3e393363adc24d78369faaae432 0cf4c7da41b49030a80b6e3e651af667d90d69a9 0f5411bc107568070ce12133cdc57e8f2bb25ec8 0f6cfb8c18b6586ed2f872644f08dfb696857cbb 115a9f30b12b1f082c486ea10f2e6dcc1038aa42 1181584c2808fa091e03cf1cd156994402204925 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2025.2+ds2+~3.23.0+ds1-1), python3-legacy-cgi, python3-pycbf (>= 0.9.7+dfsg1-2~), python3 (<< 3.14), python3 (>= 3.13~), python3-h5py (>= 3), python3-hdf5plugin, python3-matplotlib, python3-mrcfile, python3-natsort, python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3-nxmx, python3-ordered-set, python3-pil, python3-pint, python3-procrunner, python3-pymol, python3-requests, python3-scipy, python3-six, python3-tqdm, python3-wxgtk4.0, python3:any, libantlr3c-3.4-0 | libantlr3c-antlrdbg-3.4-0, libboost-numpy1.83.0 (>= 1.83.0), libboost-numpy1.83.0-py313, libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py313, libboost-thread1.83.0 (>= 1.83.0), libboost-timer1.83.0 (>= 1.83.0), libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0t64 (>= 8.0.0), libgcc-s1 (>= 4.5), libgl1, libglu1-mesa | libglu1, libhdf5-310 (>= 1.14.3), libmmdb2-0 (>= 2.0.22), libssm2 (>= 1.4.0), libstdc++6 (>= 14) Section: python Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Python Toolbox for crystallography Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide a selected collection of python modules from the cctbx project. drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/bin/ -rwxr-xr-x root/root 3268 2025-10-24 17:38 ./usr/bin/annlib.python -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/annlib.show_build_path -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/annlib.show_dist_paths -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/boost.gcd -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/boost.lcm -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/boost.python -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/boost.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/boost.show_dist_paths -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/boost_adaptbx.divide_by_zero -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/boost_adaptbx.double_overflow -rwxr-xr-x root/root 3807 2025-10-24 17:38 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./usr/bin/phenix.mtz.dump -rwxr-xr-x root/root 3776 2025-10-24 17:38 ./usr/bin/phenix.mtz2map -rwxr-xr-x root/root 3788 2025-10-24 17:38 ./usr/bin/phenix.mtz_as_cif -rwxr-xr-x root/root 3784 2025-10-24 17:38 ./usr/bin/phenix.omegalyze -rwxr-xr-x root/root 3820 2025-10-24 17:38 ./usr/bin/phenix.pdb.b_factor_stats -rwxr-xr-x root/root 3832 2025-10-24 17:38 ./usr/bin/phenix.pdb.biomt_reconstruction -rwxr-xr-x root/root 3800 2025-10-24 17:38 ./usr/bin/phenix.pdb.hierarchy -rwxr-xr-x root/root 3832 2025-10-24 17:38 ./usr/bin/phenix.pdb.mtrix_reconstruction -rwxr-xr-x root/root 3788 2025-10-24 17:38 ./usr/bin/phenix.pdb_as_cif -rwxr-xr-x root/root 3820 2025-10-24 17:38 ./usr/bin/phenix.pdb_atom_selection -rwxr-xr-x root/root 3820 2025-10-24 17:38 ./usr/bin/phenix.pdb_cif_conversion -rwxr-xr-x root/root 3855 2025-10-24 17:38 ./usr/bin/phenix.pdb_editor -rwxr-xr-x root/root 3820 2025-10-24 17:38 ./usr/bin/phenix.pdb_interpretation -rwxr-xr-x root/root 3780 2025-10-24 17:38 ./usr/bin/phenix.pdbtools -rwxr-xr-x root/root 3776 2025-10-24 17:38 ./usr/bin/phenix.perigee -rwxr-xr-x root/root 3772 2025-10-24 17:38 ./usr/bin/phenix.polder -rwxr-xr-x root/root 3840 2025-10-24 17:38 ./usr/bin/phenix.process_predicted_model -rwxr-xr-x root/root 3824 2025-10-24 17:38 ./usr/bin/phenix.r_factor_statistics -rwxr-xr-x root/root 3772 2025-10-24 17:38 ./usr/bin/phenix.rama_z -rwxr-xr-x root/root 3812 2025-10-24 17:38 ./usr/bin/phenix.ramalyze -rwxr-xr-x root/root 3804 2025-10-24 17:38 ./usr/bin/phenix.rank_scale_map -rwxr-xr-x root/root 3836 2025-10-24 17:38 ./usr/bin/phenix.real_space_correlation -rwxr-xr-x root/root 3824 2025-10-24 17:38 ./usr/bin/phenix.real_space_diff_map -rwxr-xr-x root/root 3840 2025-10-24 17:38 ./usr/bin/phenix.reciprocal_space_arrays -rwxr-xr-x root/root 3848 2025-10-24 17:38 ./usr/bin/phenix.reflection_file_converter -rwxr-xr-x root/root 3832 2025-10-24 17:38 ./usr/bin/phenix.reflection_statistics -rwxr-xr-x root/root 3776 2025-10-24 17:38 ./usr/bin/phenix.reindex -rwxr-xr-x root/root 3808 2025-10-24 17:38 ./usr/bin/phenix.remove_outliers -rwxr-xr-x root/root 3818 2025-10-24 17:38 ./usr/bin/phenix.resolution -rwxr-xr-x root/root 3796 2025-10-24 17:38 ./usr/bin/phenix.rna_validate -rwxr-xr-x root/root 3820 2025-10-24 17:38 ./usr/bin/phenix.rna_validate_bonds -rwxr-xr-x root/root 3828 2025-10-24 17:38 ./usr/bin/phenix.rna_validate_puckers -rwxr-xr-x root/root 3824 2025-10-24 17:38 ./usr/bin/phenix.rna_validate_suites -rwxr-xr-x root/root 3812 2025-10-24 17:38 ./usr/bin/phenix.rotalyze -rwxr-xr-x root/root 3868 2025-10-24 17:38 ./usr/bin/phenix.secondary_structure_restraints -rwxr-xr-x root/root 3868 2025-10-24 17:38 ./usr/bin/phenix.secondary_structure_validation -rwxr-xr-x root/root 3832 2025-10-24 17:38 ./usr/bin/phenix.segment_and_split_map -rwxr-xr-x root/root 3764 2025-10-24 17:38 ./usr/bin/phenix.sisa -rwxr-xr-x root/root 3796 2025-10-24 17:38 ./usr/bin/phenix.sort_hetatms -rwxr-xr-x root/root 3784 2025-10-24 17:38 ./usr/bin/phenix.suitename -rwxr-xr-x root/root 3800 2025-10-24 17:38 ./usr/bin/phenix.suitename_old -rwxr-xr-x root/root 3760 2025-10-24 17:38 ./usr/bin/phenix.tls -rwxr-xr-x root/root 3796 2025-10-24 17:38 ./usr/bin/phenix.tls_analysis -rwxr-xr-x root/root 3788 2025-10-24 17:38 ./usr/bin/phenix.tls_as_xyz -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/phenix.undowser2_validation -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/phenix.undowser_validation -rwxr-xr-x root/root 3816 2025-10-24 17:38 ./usr/bin/phenix.unique_with_biomt -rwxr-xr-x root/root 3809 2025-10-24 17:38 ./usr/bin/phenix.validate_H -rwxr-xr-x root/root 3772 2025-10-24 17:38 ./usr/bin/phenix.xmanip -rwxr-xr-x root/root 3776 2025-10-24 17:38 ./usr/bin/phenix.xtriage -rwxr-xr-x root/root 3822 2025-10-24 17:38 ./usr/bin/rstbx.index -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/rstbx.python -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/rstbx.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/rstbx.show_dist_paths -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/rstbx.simage.create -rwxr-xr-x root/root 3910 2025-10-24 17:38 ./usr/bin/rstbx.simage.explore_completeness -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/rstbx.simage.solver -rwxr-xr-x root/root 3870 2025-10-24 17:38 ./usr/bin/rstbx.simage.wx_display -rwxr-xr-x root/root 3785 2025-10-24 17:38 ./usr/bin/samosa.join -rwxr-xr-x root/root 3789 2025-10-24 17:38 ./usr/bin/samosa.scale -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/scitbx.apply_tapenade_hints -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/scitbx.generate_error_h -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/scitbx.histogram -rwxr-xr-x root/root 3268 2025-10-24 17:38 ./usr/bin/scitbx.python -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/scitbx.show_build_path -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/scitbx.show_dist_paths -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/scitbx.show_exp_times -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/scitbx.show_sizes -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/scitbx.unicode_examples -rwxr-xr-x root/root 3271 2025-10-24 17:38 ./usr/bin/serialtbx.python -rwxr-xr-x root/root 3814 2025-10-24 17:38 ./usr/bin/serialtbx.show_build_path -rwxr-xr-x root/root 3814 2025-10-24 17:38 ./usr/bin/serialtbx.show_dist_paths -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/smtbx.absolute_structure -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/smtbx.anom_refine -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/smtbx.benchmark_refinement -rwxr-xr-x root/root 3767 2025-10-24 17:38 ./usr/bin/smtbx.masks -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/smtbx.python -rwxr-xr-x root/root 3771 2025-10-24 17:38 ./usr/bin/smtbx.refine -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/smtbx.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/smtbx.show_dist_paths -rwxr-xr-x root/root 3792 2025-10-24 17:38 ./usr/bin/sphinx.build -rwxr-xr-x root/root 3272 2025-10-24 17:38 ./usr/bin/spotfinder.python -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/spotfinder.show_build_path -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/spotfinder.show_dist_paths -rwxr-xr-x root/root 3938 2025-10-24 17:38 ./usr/bin/wxtbx.anomalous_differences_histogram -rwxr-xr-x root/root 3894 2025-10-24 17:38 ./usr/bin/wxtbx.inspect_r_free_flags -rwxr-xr-x root/root 3855 2025-10-24 17:38 ./usr/bin/wxtbx.plan_sad_experiment -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/wxtbx.python -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/wxtbx.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/wxtbx.show_dist_paths -rwxr-xr-x root/root 3870 2025-10-24 17:38 ./usr/bin/wxtbx.show_file_info -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/wxtbx.xtriage drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/ drwxr-xr-x root/root 0 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+------------------------------------------------------------------------------+ | Summary Mon, 24 Nov 2025 12:14:29 +0000 | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 8296528 Build-Time: 4498 Distribution: unstable Host Architecture: riscv64 Install-Time: 13 Job: /srv/rebuilderd/tmp/rebuilderd9G8i4q/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc Machine Architecture: riscv64 Package: cctbx Package-Time: 4583 Source-Version: 2025.2+ds2+~3.23.0+ds1-1 Space: 8296528 Status: successful Version: 2025.2+ds2+~3.23.0+ds1-1 -------------------------------------------------------------------------------- Finished at 2025-11-24T12:13:50Z Build needed 01:16:23, 8296528k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderd9G8i4q/out checking libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb: size... md5... sha256... sha1... all OK checking libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb: size... md5... sha1... sha256... all OK checking libcctbx0_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb: size... md5... sha256... sha1... all OK checking python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb: size... sha256... sha1... md5... all OK checking python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb: size differs for python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_riscv64.deb